Chaetura pelagica (chimney swift): 104390410
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Entry
104390410 CDS
T08631
Symbol
DDB2
Name
(RefSeq) LOW QUALITY PROTEIN: DNA damage-binding protein 2
KO
K10140
DNA damage-binding protein 2
Organism
cpea
Chaetura pelagica (chimney swift)
Pathway
cpea03420
Nucleotide excision repair
cpea04115
p53 signaling pathway
cpea04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
cpea00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
104390410 (DDB2)
09124 Replication and repair
03420 Nucleotide excision repair
104390410 (DDB2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cpea04121
]
104390410 (DDB2)
03400 DNA repair and recombination proteins [BR:
cpea03400
]
104390410 (DDB2)
Ubiquitin system [BR:
cpea04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
104390410 (DDB2)
DNA repair and recombination proteins [BR:
cpea03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
104390410 (DDB2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_Prp19
WD40
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_WDHD1_1st
WDR55
Beta-prop_RIG_2nd
Beta-prop_EML
Beta-prop_WDR19_1st
EIF3I
Beta-prop_WDR75_1st
Beta-prop_IFT140_1st
Beta-prop_EIPR1
Beta-prop_WDR90_POC16_2nd
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_C
WD40_RFWD3
Beta-prop_TEP1_2nd
PEP5_VPS11_N
Beta-prop_Vps41
Beta-prop_HPS5
NBCH_WD40
Motif
Other DBs
NCBI-GeneID:
104390410
NCBI-ProteinID:
XP_009997842
LinkDB
All DBs
Position
Unknown
AA seq
554 aa
AA seq
DB search
MAPVNQSKDKKHERAHEHWLEEARSAGKRKADYKELGNEPLAKKLFLRKMSKAPKKIGWS
GGGSVVRNNHQLERQCSIVHYVYQNMLGGSIRSRLRQSLQLPFLRSLASYRLFRTASPFD
RRVTCLEWHPTHPSTLAVGSKGGDIILWDYEVLTKTCFIKGKGPGDSLGDMKFSPYEAVK
LYVASGDGTLSLQDVEGRAVQVISRAPDCGHEYHNVCCWYCSVDVSASCRAVVTGDNIGN
VVLLSTSGEEIWKLKLHKKKVTHVEFNSRCEWLLATASVDQTVKIWDLRNIKNKTNFLHV
LPHDKPVNAAYFSPTDGAKLLSTDQRSEIRVYSSSDWSKPQHLIPHPHRQFQHLTPIKAT
WHPRYDLIVAGRYPDPKFPGYTVNELRTIDVFDGNTGEMVCQLHDPNASGIISLNKFNPM
GDTLASGMGFNILIWSREEMVAKKQEHLLKAMAVQGLGSWSLSRRGGQRPANPGTSKLKA
KLLSRAKLLSWELKEIGTKSNDSKSQGRKQKGGNLENGFSILVLSGSQGKNSVGNGQYKL
CRALAFYFVLSPWT
NT seq
1665 nt
NT seq
+upstream
nt +downstream
nt
atggctccagtgaaccagtcaaaggacaagaagcatgagagggcacatgagcattggctg
gaagaggcaagatcagctgggaagaggaaagcagactacaaggagctagggaatgaacca
ctggcaaagaagttgtttctgagaaaaatgtccaaagcccccaagaaaattggttggagt
ggaggtgggtctgtggtgagaaacaaccatcagctggagaggcagtgcagcattgtccat
tatgtctaccagaacatgctgggaggctccattcgatcacggctcaggcagagtctgcag
ctgccctttctgcgttctcttgcctcttaccgcctctttcgaacagcaagtccctttgat
aggagagtgacatgcctggaatggcatccaacacaccctagtactctagctgttggttcc
aaaggtggagacatcatcctttgggactatgaagtgcttactaaaacctgcttcataaaa
gggaaagggccaggagattctctcggagacatgaagttcagtccttatgaggcagtgaag
ctttatgtggcatcaggggatggcaccctaagtctgcaggacgtggagggcagagcggtg
caagtcatctcccgtgccccagactgcggccatgagtaccataatgtttgttgctggtac
tgcagtgttgatgtttctgcaagctgccgtgctgtggtcacaggtgacaatataggcaac
gtggtcctgctcagcacttctggtgaagagatttggaagctgaagttgcacaagaagaaa
gtgactcatgtggagtttaactctcgatgtgagtggttgttggccacagcatctgtggat
cagacagtcaaaatctgggacctcagaaacatcaaaaacaaaacaaattttcttcatgtg
cttcctcatgacaaacctgtcaatgcagcttacttcagcccaacagatggtgccaagctc
ctgagcacagaccagcgtagtgaaatcagggtttactcatcctcagactggtccaagcca
cagcatctgatcccacatccacatcggcagtttcagcacctcacacctattaaggcaacc
tggcacccccgctacgacctgattgtagcgggacgctacccagaccccaagttcccaggg
tacacggtgaacgagctgcgaactattgatgtattcgatggcaacaccggggagatggtt
tgtcaactccatgatccaaatgcttctggtatcatctcgctcaataaatttaaccccatg
ggagacacgctggcttctggcatgggctttaatattctgatctggagccgggaggagatg
gtggccaagaagcaagaacatcttttaaaagccatggcagtacaggggcttggaagctgg
agtttgtccagacgtggagggcagaggccagcaaaccctgggacaagtaaactcaaagct
aaattactgtctcgagctaaattactgtcttgggagctgaaggagataggaacaaaaagc
aatgattctaaatcacagggaaggaagcaaaaaggggggaatctagagaatggatttagt
attttggtcctttctggatcacagggtaaaaattcagttggcaatgggcagtataagctg
tgcagggcgttagccttctactttgtcctttctccctggacctga
DBGET
integrated database retrieval system
