Chaetura pelagica (chimney swift): 104390416
Help
Entry
104390416 CDS
T08631
Symbol
ATG13
Name
(RefSeq) autophagy-related protein 13 isoform X1
KO
K08331
autophagy-related protein 13
Organism
cpea
Chaetura pelagica (chimney swift)
Pathway
cpea04136
Autophagy - other
cpea04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
cpea00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
104390416 (ATG13)
04136 Autophagy - other
104390416 (ATG13)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cpea04131
]
104390416 (ATG13)
03029 Mitochondrial biogenesis [BR:
cpea03029
]
104390416 (ATG13)
Membrane trafficking [BR:
cpea04131
]
Autophagy
Autophagosome formation proteins
ULK complex
104390416 (ATG13)
Atg1 complex
104390416 (ATG13)
Mitochondrial biogenesis [BR:
cpea03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
104390416 (ATG13)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ATG13
Motif
Other DBs
NCBI-GeneID:
104390416
NCBI-ProteinID:
XP_009997853
LinkDB
All DBs
Position
Unknown
AA seq
549 aa
AA seq
DB search
MDTDLSSQDRKDLDKFIKFFALKTVQVIVQARLGEKICTRSSSSPTGSDWFNLAIKDIPE
VTHEAKKALAGQLPAVGRSMCVEISLKTSEGDSMELEIWCLEMNEKCDKEIKVSYTVYNR
LSLLLKSLLAITRVTPAYRLSRKQGHEYVILYRIYFGEVQLSGLGEGFQTVRVGTVGTPV
GTVTLSCAYRINLAFMSTRQFERTPPIMGIIIDHFVDRPYPSSSPMHPCNYRAGEDTGAV
YPSVEDSQEVCTTSFSTSPPSQCVFTVTKAHFQTPPPVVTDTLRVPVMGLAFSHQLSSSR
LSYQPGALGVGSADMGYPVLFAGGLNAAHPHQLIGPGKEGGVPPIPSQPAHGTQADQERM
CTPLDGVHYSAATPSSSEDTETVSNSSEGKCGSPHDLLETIFIRKVGAFVNKPINQVTMA
NLDIPFAMFAPKNVELEDNDPMVNPPDSPETESPLQGSLHSEGSSGSSTGNTHDDFVMID
FKPAFSKDDILPMDLGTFYREFQNPPQLSSLSIDIGAQSMAEDLDSLPEKLAVHEKNVKE
FDAFVETLQ
NT seq
1650 nt
NT seq
+upstream
nt +downstream
nt
atggacactgatctcagttcccaggacaggaaggacctggacaagttcatcaaatttttt
gctttaaagacagtacaagtaattgtccaggcccgacttggagagaaaatctgtacccga
tcatcttcctccccaacaggctctgactggttcaatttggcaattaaagatataccagag
gttactcatgaagcaaagaaagccctggcaggacaactgcctgctgttggacggtctatg
tgtgtggagatttctctcaaaacctcagagggggactccatggagttggagatttggtgt
ctagaaatgaatgaaaagtgtgacaaagaaatcaaagtttcatacactgtttacaacagg
ctgtctctactgctgaagtctctgcttgctataaccagggtaactccagcctacagactc
tcaaggaaacaaggccatgaatatgtgatattgtacaggatatactttggtgaagtgcaa
ctgagtggcttgggagaaggtttccagacagtccgtgttgggacagtgggtacccctgtg
ggcactgtcaccttgtcttgtgcctacagaatcaaccttgctttcatgtcaaccaggcag
tttgagaggacccctcctatcatggggattatcattgatcactttgtggaccgtccctat
cccagctcttcgcccatgcatccctgcaattacagagctggtgaggacactggtgcagta
tacccctcagtagaagattcccaagaagtgtgtaccacatctttttccacctctcctcca
tctcagtgtgtttttactgtgacaaaggcacactttcagacccctcctcctgtggtgacg
gacaccttgagggtcccagtgatgggactggccttttcacatcaactttccagctctcgt
ctttcctatcagcctggtgccctgggagttggatcagctgacatggggtatcctgtactc
tttgctggtggcttgaatgctgcacaccctcaccagttgatcggtccaggcaaagagggg
ggagttcccccgattcctagccagccagcacatgggactcaagctgaccaagagaggatg
tgcaccccactggatggagtccactactcagcagctactccttctagcagcgaggacaca
gaaacagtatccaacagcagtgaggggaagtgtgggtccccacatgaccttttggagacc
atctttatccggaaggtgggagcttttgtcaacaaacccattaatcaggtgaccatggcc
aacttagacattccttttgccatgtttgctcccaagaatgttgagctggaagataacgac
cccatggtcaatcctcctgactccccagaaactgaatctcctctacaaggcagcttacac
tcggagggctccagtggcagcagcacagggaacacccacgatgactttgttatgattgac
tttaaaccagcattttcaaaagatgacattcttccaatggacctggggacattttaccgt
gagtttcagaacccccctcaactcagcagcctctccattgacattggagcacagtccatg
gcagaggatttggactcgttaccagagaagctggcagtccatgagaaaaacgtcaaggag
tttgatgcctttgtagaaaccctgcagtga
DBGET
integrated database retrieval system
