Chaetura pelagica (chimney swift): 104390466
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Entry
104390466 CDS
T08631
Symbol
VPS18
Name
(RefSeq) vacuolar protein sorting-associated protein 18 homolog
KO
K20181
vacuolar protein sorting-associated protein 18
Organism
cpea
Chaetura pelagica (chimney swift)
Pathway
cpea04140
Autophagy - animal
cpea04142
Lysosome biogenesis
cpea04145
Phagocytosis
cpea04148
Efferocytosis
cpea05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
cpea00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagocytosis
104390466 (VPS18)
04142 Lysosome biogenesis
104390466 (VPS18)
04140 Autophagy - animal
104390466 (VPS18)
04148 Efferocytosis
104390466 (VPS18)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
104390466 (VPS18)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cpea04131
]
104390466 (VPS18)
Membrane trafficking [BR:
cpea04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
104390466 (VPS18)
Hops complex
104390466 (VPS18)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pep3_Vps18
VPS18_solenoid_2nd
VPS18_solenoid_1st
VPS18_RING_C
Clathrin
zf-C3HC4_2
zf-RING_Vps41
zf-RING_16
aq_1631
zf-RING_5
zf-RING_11
zf-RING_UBOX
zf-ANAPC11
DUF2229
zf-RING_2
zf_RING_Vps8
Nup54_57_C
DUF8221
LETM1_C
DUF5600
STX17_N
RBSN_mid
zf-rbx1
Lact-deh-memb
DUF1664
Motif
Other DBs
NCBI-GeneID:
104390466
NCBI-ProteinID:
XP_009997906
LinkDB
All DBs
Position
Unknown
AA seq
959 aa
AA seq
DB search
MKANGIWNSIHFLSPGYVNARLEKETPIFNKQRIDFAPPEKINSLVVSSNQLCMSLGKDT
LLRIDLGKPDEPNQVELGRKDEARVYKMFLDHTGSHLLIALNTSECLYLNRSVQKVRALS
RWKGHLIESVGWNKFLGSETNTGPILVGTAQGQIYEAEISVSEGSLFSTNPDQYFRQVYT
LEEESGPAPVCCLEIERGIEGKFFIIATTRKRLFQFVGKVPEGTEQQGFSSIFAMHADHL
PSFREFPANLGFSEIAFYTPKLRSNPRSFAWMMGNGVLYGTLDYSRPDSILSDERVWVYP
SDIDITVNKPISIVLTQFHFLLLLPDRVKAVCTLNGQVVFQDLFLEKFGLLTRMIKDPTV
QQIWIHTEKVVFRYHVQRESRDVWKMYMNMNKFDLAKEYCKDRPECLDIVLAKEAEHCFQ
NKRYLDSAKCYALTQNYFEEIALKFIEAKQEEALMEFLIKKLSNLKPSEKTQTTLLTTWL
TELYLNWLGILEGDPSQRNLYLDTREKFRTFLSSPKNKDCLFNNRASIYELLASHGDTEH
MVYFAVIMQDYERVVAHHCQHDEYDEALNVLSRHRDEKLFYKFSPVLIQHIPKKVVDAWI
SMGSRLDARNLIPALVNYSQSASTQQINEAIRYMEFCVYQLEETQQAIHNYLLSLYALCR
PDSLLSYLEQAGTNPNRIHYDLKYALRLCAEHGHHRACVHIYKVMELYEEAVDLALQVDV
DLAKSCADLPEDDEELRKKLWLKIACHVVQEEKDVKKAMACLSSCALLKIEDVLPFFPDF
VTIDHFKEAICNSLEDYNKHIEELKREMEEATQSAKRIREDIQEMRNKYGSVEPQEKCAA
CDFPLLNRPFYLFLCGHMFHYDCLLQAVFPNLPAYKQAKLEDLQKKLATTSQPSKSHHRP
KDTDTISLGKGQQSREQIKADIDDIVAAECVYCGELMIRSIDKPFIDPQKYEEEMQSWL
NT seq
2880 nt
NT seq
+upstream
nt +downstream
nt
atgaaagcaaacggcatttggaacagtattcattttctttctccaggatatgtgaatgct
cgactggagaaggaaacaccaatatttaacaagcaaaggattgattttgctcctccagag
aagattaacagcttagtggtctcttctaaccagctctgtatgagccttggcaaagacacc
cttctcaggattgatcttgggaagccagatgaacctaatcaggtagagctgggacgcaaa
gatgaagccagagtctacaagatgtttttggaccacacaggctctcatctcctgattgct
ctgaacaccagtgaatgcctttacttgaacagaagcgttcagaaagtgcgagccctctcc
cgctggaagggccacttgattgagagtgtgggctggaacaaatttcttggttcagagacc
aacactgggcctatcctagtggggacagcccaggggcagatctacgaggctgaaatctct
gtcagtgagggaagcctcttcagcactaatcctgaccagtactttcgacaagtctacact
ctggaggaggaatcaggacctgccccagtctgctgcttggagattgaacgagggatagaa
gggaaatttttcattatagccaccactcgaaaaagactcttccagtttgttggcaaagtg
cctgaaggcacagagcagcaaggcttcagctccatatttgctatgcatgccgaccatttg
cccagcttccgggagtttccagccaaccttggtttcagtgagatagctttttacacccca
aaactgcgctccaaccctcgctcctttgcctggatgatgggaaatggtgttttatatggt
acgttggattacagtcgtcctgattcaattttgagtgatgaacgggtctgggtttatcct
tctgatattgacataactgtgaacaagccaatatccattgtacttacccagttccacttc
ctgttgctgctgcctgatcgggtgaaggctgtctgcactctgaatgggcaggttgttttt
caagatctgttcctggaaaagtttggcttgctgacacgcatgatcaaagatcccacagtc
cagcagatatggatccacactgagaaggtagtgttccgctaccacgtccagcgggaatct
agagatgtgtggaagatgtatatgaatatgaacaaatttgatttagccaaagagtattgt
aaagaccgtccagagtgcctagatattgtgctggcaaaagaggcagagcactgcttccaa
aacaagaggtatctagacagtgccaaatgttacgccctgacccagaactactttgaggaa
attgcccttaaattcattgaagccaagcaagaagaggccctaatggagtttctgattaag
aagctaagtaacctaaagccttctgagaagacacagaccactctgctgaccacgtggtta
acggagctgtacctgaactggctgggtatattggaaggagacccctcgcagcgcaatctc
tatttggatacacgggagaagtttcgcactttcctgagcagtcctaaaaacaaagactgt
ctgtttaataaccgggcatctatttatgagctgctggcaagccatggggacacagaacac
atggtctactttgcagtcatcatgcaggactatgagcgtgttgtagcccaccactgccag
catgatgagtatgatgaagctctaaatgtgctgtccaggcacagagatgagaagctgttc
tacaagttctctccagtcctcatccagcatattcccaagaaggtagttgatgcttggatt
tctatgggctccagactggatgccaggaacctcattccagctctcgttaactacagccag
agtgccagcactcagcagatcaatgaagccattagatacatggagttttgtgtctatcag
ctggaggaaacccagcaagccattcacaactacctgttgtctctttatgcgttgtgtcgg
ccagactcactgctctcatacctggaacaagcaggaaccaacccaaacaggatccactat
gacctgaagtatgcattgcgcctgtgtgcagagcatgggcaccaccgtgcatgtgtccat
atttacaaagtgatggaattatatgaggaggctgtggatctcgccttacaggtggatgtt
gatcttgccaagtcctgtgcagatctccctgaagatgatgaggaactccgaaagaagctc
tggttgaagattgcttgccatgttgttcaggaagagaaggatgtcaagaaggcaatggcc
tgcctctccagctgtgccctgctgaagattgaagacgtcctgccattctttccagacttt
gtcactattgaccatttcaaggaggccatctgtaactccctggaggactacaacaagcac
attgaagagctgaaaagggagatggaggaagccacacagagtgccaagagaatccgagag
gacatccaggaaatgcgaaataagtatggttctgtggagcctcaggaaaaatgtgctgct
tgtgactttccacttctgaaccgccctttttaccttttcctgtgtggtcacatgtttcac
tatgactgtctcctccaagcagttttcccaaaccttcctgcctataagcaggcaaaactt
gaagatcttcagaagaagctggcaactaccagtcagccttccaagagccaccatcgtccc
aaggacacagatactattagtttggggaagggacagcagagccgggaacagatcaaagct
gacattgatgatattgtggcagccgaatgtgtgtactgtggggagctgatgatccggtcc
attgacaagccttttattgatccccaaaagtatgaagaagagatgcaaagctggctgtag
DBGET
integrated database retrieval system
