Chaetura pelagica (chimney swift): 104390498
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Entry
104390498 CDS
T08631
Symbol
CACNA1S
Name
(RefSeq) voltage-dependent L-type calcium channel subunit alpha-1S
KO
K04857
voltage-dependent calcium channel L type alpha-1S
Organism
cpea
Chaetura pelagica (chimney swift)
Pathway
cpea04010
MAPK signaling pathway
cpea04020
Calcium signaling pathway
cpea04260
Cardiac muscle contraction
cpea04261
Adrenergic signaling in cardiomyocytes
cpea04270
Vascular smooth muscle contraction
cpea04912
GnRH signaling pathway
Brite
KEGG Orthology (KO) [BR:
cpea00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
104390498 (CACNA1S)
04020 Calcium signaling pathway
104390498 (CACNA1S)
09150 Organismal Systems
09152 Endocrine system
04912 GnRH signaling pathway
104390498 (CACNA1S)
09153 Circulatory system
04260 Cardiac muscle contraction
104390498 (CACNA1S)
04261 Adrenergic signaling in cardiomyocytes
104390498 (CACNA1S)
04270 Vascular smooth muscle contraction
104390498 (CACNA1S)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cpea04040
]
104390498 (CACNA1S)
Ion channels [BR:
cpea04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
104390498 (CACNA1S)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
GPHH
Ca_chan_IQ
PKD_channel
Motif
Other DBs
NCBI-GeneID:
104390498
NCBI-ProteinID:
XP_009997938
LinkDB
All DBs
Position
Unknown
AA seq
1849 aa
AA seq
DB search
MEAASPQDDVRKRQQKEKSKKPVPPVAPRPARALFCLTLQNPLRKACISIVEWKPFEIII
LLTIFANCVALAIYQPMPEDDTNVANSSLEKMEYAFLIFFAIEAMLKIIAYGFLFHTDAY
LRNGWNVLDFSIVSLGLVTMTLEQVNAKQTGTSGGKGGFDVKALRAFRVLRPLRLVSGVP
SLQVVLNSIIKAMVPLLHIALLVLFMIIIYAIVGQELFKGRMHKTCYYLGTDVIATEISE
KPAPCTSSGHGRHCSINGSECRSGWAGPNNGITHFDNFGFAMLTVYQCITMEGWTEVLYW
VNDAMGNEWPWIYFVSLILLGSFFVLNLVLGVLSGEFTKEREKAKSRGTFQKLREKQQLE
EDLKGYMDWITHAEIMDSDRARGEGMASDEGGSETESLYEIEGMNKWLLYLRHWRRWNRM
FRRKCRDVVKSKFFYWLVILLVALNTLSIASEHHFQPEWLTQVQDNANRVLLALFVAEML
LKMYALGLRQYFMSLFDRFDCFVVCSGILETILVELGTLSPLGISVLRCIRLLRIFKITR
YWTSLSNLVASLLNSVRSIASLLLLLFLFIIVFALLGMQLFGGKFDFEDMEVRRSTFDNF
PQALISVFQILTGEDWNSIMYDGIMAYGGPSFPGMLVCIYFIILFVCGNYILLNVFLAIA
VDNLAEAESLTLAQKAKAEERKRRKMSRGYPEKSEDEKQMLAKKLEQKAKGEGIPTTAKL
KVDEFESNVNEIKDPYPSADFPGDDEEDEPEIPLSPRPRPLAELQLKEKAVPMPEASSFF
IFSPTNKFRMLCHRTVNATWFTNFILLFILLSSISLAAEDPIRAESFRNQILGYFDIGFT
SVFTVEIVLKMTTYGAFLHKGSFCRNSFNILDLLVVAVSLISMGFESSTISVVKILRVLR
VLRPLRAINRAKGLKHVVQCVFVAIKTIGNIVVVTTLLQFMFACIGVQLFKGKFYRCTDP
SKITEKECRGYFINYVDGDPTQIELQKRVWVHSSFHFDNVFSAMMSLFTVSTFEGWPELL
YMAIDTNAEDTGPIYNYRVEIAMFFIIYIILIAFFMMNIFVGFVIVTFQEQGENEYKNCE
LDKNQRQCVQYALKARPLQRYIPKNPYQYQIWYVVTSSYFEYLMFFLILLNTICLGMQHY
NQSAEMNHISDILNVAFTIIFTLEMILKLMAFKAKGYFGDPWNVFDFLIVIGSIIDVILS
EIDTVLASSGGLYCLSGGCDGTDSDDNSRVSITFFRLFRVMRLVKLLSRGEGVRTLLWTF
IKSFQALPYVALLIVMLFFIYAVIGMQMFGKIAMVDGTQINRNNNFQTFPQAVLLLFRCA
TGEAWQEILLDCSYGKLCDPESDYAEGEEYTCGTGFAYFYFISFYMLCAFLIINLFVAVI
MDNFDYLTRDWSILGPHHLDEFKRIWAEYDPEAKGRIKHLDVVTLLRRIQPPLGFGKFCP
HRVACKRLVCMNMPLNSDGTVTFNATLFALVRTALKIKTEGNFEQANEELRAIIKKIWKR
TSMKLLDQVIPPIGDDEVTVGKFYATFLIQEHFRKFMKRQEEYYGYRRKKNPVEIQAGLR
SIEEEAAPEIHRAISGDLTAEEELERAMVEAAIEEGIYRRTGGLFGQVDSFLEPSSPLQP
QVASQRPLQFTEVGSEDLDSPVFLDDFPQEGNTNVNNANSNNWLEGMQYEDEVLRKTVPA
APRNPMRECHHPLPMERLRQRPSRRQEATSGGHPAPGLHRLSQELPREDGVVTRVVFSSG
CQQGEMGDPSTSSTPAITFLIQEALISGGLEALAHDPSFIAVTRDEMAASSQLEIDDVEK
AALELLKGRETLQGTKTGSALQNISVASPSSSPGLSTAPSQKPIAAHLL
NT seq
5550 nt
NT seq
+upstream
nt +downstream
nt
atggaggctgcttctccccaggatgatgtgaggaagaggcaacagaaggagaaatccaag
aagccggtgccaccagtagctcctcggccagccagggctctgttctgcttaaccctgcaa
aatccactgcggaaggcatgcatcagcattgtggagtggaaaccctttgagatcatcatc
ctcctgaccatctttgccaactgtgttgcactggccatctaccagccaatgcctgaggat
gacaccaacgttgccaactccagcctggagaagatggaatatgccttcctgatcttcttt
gccattgaggcaatgctcaagataattgcctatgggtttctgttccatacggatgcctat
ctccgaaacggctggaacgtgctcgacttctccatcgtgtcactagggcttgtcaccatg
accctggagcaggtaaatgcaaagcagaccgggacttcggggggaaaaggtggctttgat
gtgaaggccctgcgagcgttccgtgtgctgagacccctgcgcctggtgtccggagtgcca
agtcttcaggttgtcctgaactctatcatcaaggccatggtgcccttactccacattgcc
ctgctagttctcttcatgatcatcatctatgccattgtcgggcaagagctcttcaagggc
aggatgcacaagacctgctactatctcgggacagatgtgattgccaccgagatatcagag
aagccagccccgtgcaccagctctggccacgggcgacactgtagcatcaatggcagcgag
tgccgcagcggctgggcagggcccaacaacggcatcacccactttgataactttggcttt
gctatgctgactgtctaccagtgcatcaccatggagggctggacggaagttctctactgg
gtaaatgatgctatggggaatgaatggccctggatctactttgtcagccttatcttgctt
ggctccttctttgttctcaacctggtgctgggggtgctcagtggtgagttcaccaaagag
cgtgagaaggccaagtcaaggggcacatttcagaagctgcgggagaagcagcagctggag
gaggatctgaagggctacatggactggatcacccatgcagagatcatggacagcgaccgg
gccaggggagaaggtatggcatcagatgaaggaggttcagagacagagagcttgtatgaa
attgagggcatgaacaagtggcttctgtacttacgtcactggaggcgttggaaccgaatg
tttcgtaggaagtgcagggatgtggtgaagtccaagttcttctactggcttgtcatcctg
ctggtggcactgaacaccctctccattgcctctgagcaccacttccagccagaatggctg
acacaggtgcaagacaatgccaaccgggtgctgctggcactctttgtggctgagatgcta
ctgaagatgtatgccctgggcctgcgccaatacttcatgtcgctcttcgaccgcttcgac
tgctttgtggtgtgctcgggcatattggagaccatcctggtggagcttggcaccttgtca
cccctgggcatctctgtgctgcgttgcatccggctcctccgcatcttcaaaatcaccagg
tactggacatctctgagcaacctggtggcttccctgctcaactcagtccgctccattgcc
tctctgctcctccttctcttcctcttcatcattgtctttgccctgctgggcatgcagctc
tttggaggcaagtttgactttgaggatatggaagtgaggcgcagcacatttgacaacttc
ccccaggccctcatcagtgtcttccagatcctgactggagaggattggaattcaatcatg
tacgacgggatcatggcctatgggggcccatccttccctggcatgctggtctgcatctac
ttcataatcctctttgtctgtgggaactatatcctcctcaatgtcttcctggccatcgct
gttgataacctggcggaggctgagagcctgaccctagcccagaaggccaaagcagaggaa
cgcaagcggcggaagatgtccagaggttacccagagaagtctgaagatgagaagcagatg
ctggcaaagaagcttgagcagaaagcaaagggagaagggattcccacaacagccaagtta
aaagtggatgaatttgaatccaatgtcaatgaaatcaaagatccctacccttctgcagac
ttcccaggtgatgatgaggaagatgagcccgaaatccctctgagtcctcggccccgtccc
cttgcagagctacagctgaaggagaaggcagtgcccatgcctgaagccagttcgttcttc
atcttcagtccaaccaacaagtttcgaatgctgtgccacagaactgtcaatgccacctgg
ttcaccaacttcatcctgctcttcatcctgctcagcagcatctccctggcagccgaggat
cccatccgggccgagtccttccgcaaccagattcttggatactttgacattggtttcacc
tctgtcttcacagtcgaaattgtcttaaagatgacaacctatggtgctttcctgcacaaa
ggctctttctgcaggaactcattcaatatcctcgacttgctggtggtcgctgtctccctg
atctccatgggattcgagtccagtaccatctcagtggtgaagatcctccgggtgctgagg
gtgctgaggcctctgcgagccattaatagggctaaggggctgaagcacgtggtccagtgt
gtgtttgtggccatcaagaccattggtaacattgtggtcgtcacgacattgctgcagttc
atgtttgcctgcattggggtccagctattcaagggcaagttctatagatgcacagatcca
tccaagataacagagaaggagtgcaggggttatttcatcaactatgtggatggggacccc
acgcagattgagcttcagaagcgtgtctgggtgcacagcagcttccattttgacaacgtc
ttctcagccatgatgtcacttttcactgtctccaccttcgagggctggccagagctgctg
tacatggctattgacactaatgctgaggatacaggtcctatctacaactaccgggtggag
attgcaatgttcttcattatctacatcatcctcattgccttcttcatgatgaatatcttt
gtgggctttgttattgtcaccttccaggagcagggggaaaatgaatacaagaactgtgag
ctggacaagaaccagcgccagtgtgtgcagtacgccctgaaggctcgtccgctgcagcgc
tacatccccaagaacccctatcagtaccagatctggtatgtggtcacttcctcctacttt
gagtacctcatgttcttcctgatcctgctgaacaccatctgcctgggcatgcagcattac
aaccagtctgcagaaatgaaccacatctcagacatcctcaatgtggccttcaccatcatc
ttcaccctggagatgatcctcaagctcatggcctttaaagcaaagggctactttggggac
ccctggaacgtctttgacttcctcatagtgattggcagtatcattgatgtcatcctcagt
gagattgacactgttcttgcatccagtggtggattgtactgcctcagcgggggctgtgat
ggcactgactctgatgataattcccgtgtctccatcactttcttccggctcttccgggtg
atgaggctggtgaagcttctgagccgaggggaaggtgttaggaccctcctgtggaccttc
atcaagtccttccaggctctgccctatgtagccctgctgatcgtgatgctttttttcatc
tatgctgtgattgggatgcagatgtttgggaagattgccatggtggatgggacccagata
aaccgaaacaacaacttccaaaccttcccacaagctgtgctactgctcttcaggtgtgcg
actggtgaggcctggcaggagatcctgctggactgcagctatgggaaactgtgtgacccg
gagtcagactatgctgaaggcgaggagtacacctgtgggacaggcttcgcctacttctat
ttcatcagcttctacatgctctgtgccttcctgatcattaacctctttgtggctgtcatc
atggacaactttgactatctcacacgtgactggtccatccttgggccccatcacctggat
gaattcaaacggatctgggctgagtacgaccccgaagccaagggcagaatcaagcacttg
gatgtagtgactctgctgagacgtatccagccccccctgggttttgggaagttctgccca
caccgtgtagcttgtaagcgcctggtgtgcatgaacatgcccctgaacagcgatggcacc
gtcaccttcaatgcaaccctctttgcgctggtgaggacagccctcaagatcaagacagaa
ggtaactttgagcaggcaaatgaggagctcagagccattatcaaaaagatctggaagcga
acgagtatgaagcttttggaccaggtcatcccacccattggagatgatgaggtgacagtg
ggcaaattctatgctactttcctcatccaagagcatttcaggaagttcatgaagcgccag
gaggagtattatgggtaccggcgcaagaagaaccctgtggagattcaggctgggctgagg
agcattgaagaagaagctgctcctgaaatccatcgggccatttctggggacctaactgct
gaggaggagctggaaagagcaatggtggaggctgccatagaggaagggatatacaggagg
acgggtggcttgtttggccaggtagacagcttcctggagcccagcagccctctgcagccc
caggtggccagccagaggcccctgcagttcacagaggtgggcagtgaggaccttgattcc
cccgtcttccttgatgacttcccccaggaaggcaacacgaacgtcaacaacgccaacagc
aacaactggctggaggggatgcagtatgaggatgaggtgctgaggaagacagtgccagca
gcacccaggaatccaatgcgggagtgccaccaccccttgcccatggagaggctgcgacag
aggccaagcaggaggcaagaggccacctctgggggtcacccagcaccagggctgcaccgt
ctttcccaggagctgcccagagaggatggcgtggtgacaagagtggtgttcagctcgggg
tgccagcaaggtgaaatgggtgacccaagcacatcctccaccccagccatcaccttcctc
attcaggaggctctgatctccgggggccttgaggctctggcccatgatccatccttcata
gcagtgaccagggatgagatggcagccagcagccagctggagatagatgatgtagagaaa
gcagccttggagctgttaaaaggaagagaaacactacagggcacaaaaactggctctgcc
ctccagaacatctcagtggcatcaccatccagctccccagggctcagcacagccccctcc
cagaagcccattgctgcccatctcctgtga
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integrated database retrieval system
