Chaetura pelagica (chimney swift): 104390528
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Entry
104390528 CDS
T08631
Name
(RefSeq) pre-mRNA 3'-end-processing factor FIP1-like
KO
K14405
pre-mRNA 3'-end-processing factor FIP1
Organism
cpea
Chaetura pelagica (chimney swift)
Pathway
cpea03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cpea00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
104390528
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cpea03019
]
104390528
Messenger RNA biogenesis [BR:
cpea03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
104390528
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Fip1
TSX
Motif
Other DBs
NCBI-GeneID:
104390528
NCBI-ProteinID:
XP_009997981
LinkDB
All DBs
Position
Unknown
AA seq
545 aa
AA seq
DB search
ALEAEEDEEHWLYGDDTTGKQEDGPISGHAESSHPLQDAPQENRPVNNEDREMSQHALPS
GEDDEDDSDSDSDDDDVKVTIGNIKTGAPSYMGTPMNLNLKTGRGYGASASAKLQPKGID
LDAAGNINGLPVIEVDLDSFEDKPWRKPGADLSDYFNYGFNEETWKAYCEKQRRLQLGLD
PTPPISTENKITVQQGRTGNAEKEVENNIIKTEFKTDFLALVGGRMKAGPPPNRKLGGTI
DVIGGQAGTIRRVEGRRRDKHASEENPIQVLGDHGSKPQPPQQPQQPSQPQQPPQQQPFA
PPAGPPPPPLAGPPPPHFLHPPPPVTSVPPPLHPPGLPPPGPIPGLFPPPLAPPPALLIP
TLDGQPASYNNRQPPPFGYNSADSGFISYPPISTSHTPWVTTVDKSTSSSSSSHWEYSGS
RRERERERERERERERDRDRTPTTSEYNNDDERYRYYSRERSYDFERDYRRSRDRSRERE
DRHRERRHRDKEESSKHKSSRRKQHESEEGESHRRHKHKKNKRSKEEKEASEDGAQEGEE
QDTKE
NT seq
1638 nt
NT seq
+upstream
nt +downstream
nt
gcgctggaggcggaggaggacgaggagcactggctctacggggatgacaccactggtaaa
caagaagatggaccaatttctggacatgcagaatcttctcatcctttgcaagatgctcct
caggagaaccgacctgtcaacaatgaagaccgagagatgtcacagcacgcccttccaagt
ggtgaagatgatgaagatgacagtgatagcgacagtgatgacgatgacgtgaaagtcact
attggcaacattaaaacaggagcaccatcatacatgggaactcctatgaatctaaactta
aaaacgggtagaggctatggagcatctgcttcagccaagttgcagcccaaaggtattgac
ttagatgctgcagggaatataaatggattgcctgttatagaagtggatttagattcattt
gaagacaaaccatggaggaaaccaggtgctgatctttctgattactttaattatggattc
aatgaagaaacatggaaagcttattgtgaaaagcagcgacggcttcagcttgggctggat
cctactcctcccatcagcactgaaaataagatcacggttcagcaaggaagaacaggaaat
gctgaaaaagaagtggaaaacaacatcatcaaaacagaattcaaaacagacttcttggct
ctggtgggaggacgcatgaaggctggacctcctcctaataggaagctgggtgggacgatt
gatgtgattggtggccaggcaggcaccattaggagggtagaaggaagacgccgtgataag
catgcctctgaggaaaacccaatccaggtccttggagaccacgggagcaagccccagccc
ccccagcagccccagcagccatcacagccccagcaaccacctcagcagcagccgtttgca
ccaccagcaggtccaccaccacccccactcgctgggccacctccaccacacttcctccac
cctcctcctcctgttacttcggttccacctcccctgcatcctccaggtctgcctccacca
ggtcccatcccagggttgttcccgcctcctctggcgccaccaccagctctcctcattcca
accttggatggccagccagccagctacaacaacaggcagcctcctccatttggctacaat
tctgcagattcaggtttcatcagctacccacccatctccacatcccatacaccctgggtg
accacggtggacaaaagcacgagcagttccagcagcagccattgggagtactcgggctcc
aggcgcgagcgggagagggagcgggagcgggaaagggagagggagagagaccgagaccgc
actcccaccaccagtgaatacaacaatgatgatgaacgataccgctactatagccgagag
cgcagctatgactttgagcgcgactatcgccggagccgggaccgcagccgggagcgcgag
gatcggcaccgggagcgcaggcacagggacaaagaggagagcagcaagcataagtcttca
agacgcaagcagcacgagagcgaggagggggagagtcaccggcgccacaagcacaaaaag
aacaagcgcagcaaggaggagaaggaggccagtgaagatggggcccaggagggagaggag
caggacaccaaggagtga
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