Chaetura pelagica (chimney swift): 104390541
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Entry
104390541 CDS
T08631
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 1-like
KO
K11367
chromodomain-helicase-DNA-binding protein 1 [EC:5.6.2.-]
Organism
cpea
Chaetura pelagica (chimney swift)
Brite
KEGG Orthology (KO) [BR:
cpea00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cpea03021
]
104390541
03036 Chromosome and associated proteins [BR:
cpea03036
]
104390541
Transcription machinery [BR:
cpea03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
104390541
Chromosome and associated proteins [BR:
cpea03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
SAGA complex
104390541
SLIK complex
104390541
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
CDH1_2_SANT_HL1
CHD1-like_C
Helicase_C
Chromo
E7R
Motif
Other DBs
NCBI-GeneID:
104390541
NCBI-ProteinID:
XP_009997996
LinkDB
All DBs
Position
Unknown
AA seq
1646 aa
AA seq
DB search
MSGTGSVSGTGSDSESEEDREKSSCEDSESDYEPKNKVKSRKPPSRIEPKSSKKIAGQKK
RQLDSSDDDDLDKRGSRRQATVNISYKEAEETKTDSDDLLEVCGEDVPQPEEDEFETIEK
FMDSRIGRKGATGAATTIYAVEADGDPNTGFEKSKELGEVQYLIKWKGWSHIHNTWETEE
TLKQQNVKGMKKLDNYKKKDQETKRWLKNASPEDVEYYNCQQELTDDLHKQYQIVERIIA
HSNQKSAAGYPDYYCKWQGLPYSECSWEDGALIAKKFQTCIDEYFSRNQSKTTPFKDCKV
LKQRPRFVALKKQPPYIGGHENLELRDYQLNGLNWLAHSWCKGNSCILADEMGLGKTIQT
ISFLNYLFHEHQLYGPFLLVVPLSTLTSWQREIQTWAPQMNAVVYLGDIISRNMIRTHEW
MHPQTKRLKFNILLTTYEILLKDKSFLGGLNWVFIGVDEAHRLKNDDSLLYKTLIDFKSN
HRLLITGTPLQNSLKQLWSLLHFIMPEKFSSWEDFEEEHGKGREFGYASLHKELEPFLLR
RVKKDVEKSLPAKVEQILRMEMSALQKQYYKWILTRNYKALSKGSKGSTSGFLNIMMELK
KCCNHCYLIKPPANNEFYNKQEALQHLIRSSGKLILLDKLLIRLRERGNRVLIFSQMVRM
LDILAEYLKYRQFPFQRLDGSIKGELRKQALDHFNAEGSEDFCFLLSTRAGGLGINLASA
DTVVIFDSDWNPQNDLQAQARAHRIGQKKQVNIYRLVTKGSVEEDILERAKKKMVLDHLV
IQRMDTTGKTVLHTGSTPSSSTPFNKEELSAILKFGAEELFKEPEGEEEEPQEMDIDEIL
KRAETRENEPGPLTVGDELLSQFKVANFSNMDEDDIELEPEQNLRNWEEIIPEVQRRQIE
EEERQKELEEIYMLPRMRNCAKQISFNGSEGKRSRTRRYSGSDSDSISERKRPKKRGRPR
TIPRENIKGFSDAEIRRFIKSYKKFGGPLERLDAIARDAELVDKSEMDLRRLGELVHNGC
IKALKDNSFGQERAGRLGKVKGPTFRISGVQVNAKLVFSHEEELAPLHKSIPSDPEERKR
YVIPCYTKAAHFDIDWGKEDDSNLLIGIYEYGYGSWEMIKMDPDLSLTQKILPDDPDKKP
QAKQLQTRADYLIKLLNKDLARKEVQRLTGAGNSKRRKTKTKKNRATKAAKIKEIEIDSS
SPSSEKSDEDDEVNEDEIVSVKHPHKKIKAEKENEEKPEPDIGIKKEAEEKRETKENKRV
LKREKKEKEVKKEFKNMKEKRENKVKECTQKEVKEEKVNEIKSENKEKNKKVSLLDIPVH
ITATSEPIPISEEPEELDQKTFSVCKERMRPVKAALKQLDRPEKGLSEREQLEHTRQCLI
KIGDHITECLKEYTNPEQIKQWRKNLWIFVSKFTEFDARKLHKLYKHAIKKRQESQQHSD
QNVSSNVNTYVIRNPDIERLKENTNHDDSSRDSYPSDRHLSQYHDHHKDRHQGDAYKKSD
SRKRSYSAFSNGKDHRDWEHYKQDSRYYSDSKHRKLDDHRSRDHRSSLEGSLKDSRPNSD
HRSHLDHRIHSDHRSTSEYSHHKFSRDYRYHSDWQMDHRASGSGPRSPLDQRSPYDSRSP
LGHRSPFEHSSDHKSTPEHTWSSRKT
NT seq
4941 nt
NT seq
+upstream
nt +downstream
nt
atgtctgggacagggtcagtatcaggaactggttctgattctgaatcagaggaagataga
gagaaaagcagttgtgaagatagtgaatctgactatgagccaaaaaacaaggtcaaaagc
cggaaacctccaagcagaattgaaccaaaaagcagcaaaaagattgcaggacagaaaaag
aggcagcttgattcatcggatgatgatgaccttgacaagagaggatctcgtcgccaggca
acagtcaatattagttacaaagaagctgaagaaaccaagacagattctgatgacttgttg
gaagtttgcggagaagatgtcccgcagcctgaagaagatgaatttgaaactatagagaag
tttatggatagtcgaattggccgaaaaggagccactggtgctgcaaccaccatctatgca
gttgaggcagatggtgacccaaatactgggtttgaaaagtcaaaggagctaggagaagta
cagtatcttattaagtggaaaggctggtcacacatccataatacttgggaaactgaggaa
acactgaagcaacaaaatgttaaaggaatgaagaaactggacaactataagaaaaaggat
caggaaacaaaacgctggctgaaaaatgcttctccagaagacgtggaatactataactgc
cagcaggaacttacagatgatctacataagcagtatcaaatagtggaaaggataattgct
cattcaaatcaaaaatcagcagctggttatccagattactattgcaaatggcagggtctg
ccttactcagaatgtagctgggaagatggtgctctcattgccaaaaaatttcagacgtgt
attgatgagtattttagcagaaatcaatccaagaccactccatttaaggactgcaaggtt
ctaaaacagaggccaaggtttgttgcgctaaagaagcaaccaccttatattggtggacat
gagaatttagaattaagagattatcagttaaatggactgaactggcttgctcactcatgg
tgcaaagggaatagttgtattcttgcagatgaaatgggtctgggtaaaacaatacaaaca
atttcttttctgaactacctctttcatgaacatcaactgtatgggcctttcttgctagtc
gtgccactttctacgttgacatcttggcaaagagagattcaaacttgggctcctcagatg
aatgctgtggtttacttaggagatataattagcagaaatatgataagaactcatgaatgg
atgcatccacagaccaagcgattaaaatttaatatacttcttacaacttatgagattttg
ctgaaggataagtcattccttggtggtctgaattgggtgtttataggagttgatgaagct
catcgtttaaaaaatgatgattcccttctgtacaagactttaatagattttaagtctaat
catcgtcttcttattactggaacccctctgcaaaactccctcaaacagctttggtctttg
ctgcacttcatcatgccagaaaagttttcttcctgggaagattttgaagaggagcatggc
aaagggagagagtttggttatgcaagtcttcacaaggaacttgaaccgtttctactcaga
agagttaaaaaagatgtagaaaagtctttacctgctaaagttgaacaaattttgaggatg
gaaatgagtgcgttgcagaagcagtattacaagtggattttaacaaggaattataaagcc
ctaagtaaaggttcaaaaggcagtacctcaggctttttgaacataatgatggaactcaag
aagtgttgtaaccattgctacctcattaaaccaccagccaataatgaattctataataaa
caggaggccttacagcatttaatacgtagcagtgggaaactaatccttcttgacaagcta
ctgattcgtctacgagaacgtggcaacagagtactaattttctctcagatggtgaggatg
ctagacatcctagcagagtatttaaaatatcgtcagtttccttttcagagacttgatgga
tcaataaaaggggaattgaggaaacaagccctggatcattttaatgcagaaggatcagag
gacttctgctttttgctgtctaccagagctggaggattaggtataaacttggcatctgct
gacactgtagttatatttgattctgactggaatccacagaatgatctgcaagcacaggct
agagctcataggattggacagaagaaacaggttaatatttatcggctagtcacaaaagga
tcagttgaagaagatattcttgaaagagccaagaaaaagatggtgttagatcatttagta
attcagagaatggatactacagggaaaactgtactacatacaggctctactccttccagc
tcaacaccttttaataaggaagagttatctgcaattttgaagtttggtgctgaggagctt
tttaaagaacctgaaggggaagaagaggagcctcaggaaatggatatagatgaaatcctg
aagagggctgaaactcgagaaaatgagccaggcccactaactgtaggagatgagttgctt
tcacagttcaaggtggctaacttttccaatatggatgaagatgacattgagctggaacca
gaacaaaatttaagaaactgggaagaaataattccagaagtccagcggcgacaaatagaa
gaggaagaaagacaaaaagagcttgaagaaatatatatgctcccaaggatgagaaactgt
gcaaaacagatcagctttaatggaagtgaagggaaacgcagtaggaccagaagatattct
ggatctgatagtgactccatctcggaaagaaagcgaccaaaaaaacgtggacgaccacga
actattcctcgagaaaatattaaaggatttagcgatgcagagattaggcggtttatcaag
agttacaagaaatttggtggcccacttgaaaggttagatgctatagctagagatgctgag
ctagttgataaatctgagatggaccttagacgtctgggagaacttgtacataatggatgc
attaaggctttaaaggacaattcctttggacaagaaagagcaggtagacttgggaaagtt
aaaggcccaacattccgaatatcaggagtgcaggtgaatgcaaagctggtattctctcat
gaagaagagttggcaccattgcacaaatccattccttcagatccagaagaaaggaaaaga
tatgtcatcccatgctacaccaaggcagctcattttgatatagattggggtaaggaagat
gattccaacctgttaataggtatctatgaatatggctatggcagctgggaaatgataaaa
atggatcctgatctcagtttgacacagaagattttacctgatgatccagataagaaaccc
caggccaagcagttacagacccgtgcagattacctcattaaattactgaataaagacctt
gcaagaaaagaagtgcaaagacttactggtgcaggcaattcaaagaggaggaaaacaaaa
actaagaagaatagagcaacgaaggctgcaaaaattaaagaaatagaaattgactcctca
tcaccatcctctgaaaaatctgatgaagatgatgaggttaatgaggatgagattgtttca
gtgaaacatccacataaaaaaataaaagcagaaaaagaaaatgaagaaaaacctgagcca
gatattggtataaagaaagaagctgaagaaaaaagagagacaaaagaaaataagagggtt
ttgaaaagagagaaaaaagaaaaagaggttaaaaaagaatttaaaaatatgaaagaaaag
agagaaaacaaagtaaaagaatgcacacagaaagaagtaaaggaagaaaaggtaaatgaa
atcaaatctgaaaataaagaaaaaaataaaaaagtttcattgttggatattccagttcat
attactgcaactagtgaaccaattcctatatctgaagaacctgaagaacttgatcagaag
acattcagtgtgtgcaaagaaagaatgaggcctgtcaaagcagcattgaaacaactggat
agaccagagaaagggctttctgaaagggaacagctggagcatactagacagtgcctaatc
aaaattggggaccatattactgaatgtctaaaggagtacacaaatcctgaacaaattaaa
cagtggagaaaaaacttgtggatttttgtctctaagtttacagaatttgatgccagaaag
ctgcacaagctgtataaacatgccatcaaaaaacgccaagaatctcagcaacacagtgac
cagaatgttagcagcaatgtgaatacgtatgtaattagaaatccagatattgaaagactg
aaagagaatacaaaccatgatgacagtagcagggacagttatccttctgatagacatttg
tcacaataccatgatcatcataaggacagacatcagggagatgcttataagaaaagtgac
tctaggaaaaggtcctattcagccttcagcaatggaaaagaccacagagactgggaacac
tataaacaagacagcagatattatagtgatagtaaacatagaaagttggatgaccacagg
agcagagatcacaggtcaagcctagaaggaagtttaaaagacagtcggcctaattcagat
caccgttcccatttagaccacaggatacattcagatcaccgttccacttcagagtacagc
catcataaattttcaagagattacaggtaccactcagactggcaaatggaccacagagct
tctggtagtggcccaaggtcaccattagatcagaggtctccttatgattcaagatctcct
ttaggacacagatctccatttgaacactcatcagatcacaaaagtacacctgaacataca
tggagtagccggaaaacataa
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