KEGG   Chaetura pelagica (chimney swift): 104390754
Entry
104390754         CDS       T08631                                 
Symbol
PCDH12
Name
(RefSeq) protocadherin-12
  KO
K16499  protocadherin delta 2
Organism
cpea  Chaetura pelagica (chimney swift)
Brite
KEGG Orthology (KO) [BR:cpea00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:cpea04515]
    104390754 (PCDH12)
Cell adhesion molecules [BR:cpea04515]
 Cadherins
  Protocadherins
   104390754 (PCDH12)
SSDB
Motif
Pfam: Cadherin Cadherin_2 Cadherin_3
Other DBs
NCBI-GeneID: 104390754
NCBI-ProteinID: XP_009998253
LinkDB
Position
Unknown
AA seq 1103 aa
MGLLSCSALHLPALWWYLFLCADAQEVATFTVQYRVYEEVPPGTVIGTLAQHFEGGESGE
MADAFQLMETPGRFPLHVGSGDGALSTAGRVDREQLCRHSEPCWVSFDVLAARNLALIHV
EVRVLDINDHAPRFPTPELELEVSESASLQTRIPLDRALDAAAGPNARCSYSLSHNEHFA
LEVVSGSDGTRHAELVVVREVDRELRSSFDLVLTATDHGEPPRSGTALIKVIVLDSNDNS
PVFAESSLTVEVREDALPGTLLVVVTATDPDQGPNGEIEYSLSRHAPPEVLGAFAIDARS
GSISLQHPLDYEETRAYELDVQARDLGANPIPAHCKILVKVLDVNDNAPQVHVTWAARVP
VLSEALPRDSFVALVTTSDPDSGSNGQVHCSLSQGDEHFRLKKTTSHSYVLMTNATLDRE
LQAEYNLTLVVRDHGDLSLAVRKHLTICISDVNDNAPAFQKATYEVAIAENSEAPASLLT
VQATDPDLGFNGEITYSILDSSALGLVSIDPTTGEVFALQAFDYEQMRSLEFLVTAEDGG
HPRLASNVSIRVAVLDRNDNAPVITSPALVGGTATLSVLVHEETGCFWVAPGNGSTQGIA
AVTNATLTSCAGAPFLFTITARDVDSGINGALQYDLVGGDDSGLFILDPLMGQLFLNASN
ASSLAGSQWELVVRVSDRGDIPLHTLARVHLIFRRHGAFSKISAWEPGWPSPSVVAVICL
AALLGGCLLLLALTLSLQKKEKKDSMAYNCREAEDAHRQQHLKKPHRQIQKTDIHLVPLL
RGRSREAEPPHPGGSSQPPLHLTPTLYRTLRNQRTQKDSDEQVGTFDLPILQRRPCQPQR
PKNSAKEAANPPEKPGLGAGGPEHPQPHQHILRSLVRLSLVALAEQSPTGEFVMESPPVQ
QISQLLSLLHQGQFQPKTNHRGNKYTAKNGSRAGGLDMDGLSTKDSGHGESEAEDRDSDC
GFELSVQQLVGEELETLLEPQAELALKRLTAADPAWVARLSLPLTSSYKDNIFSPDSLHL
PQDEEAARQEKPRTFETFGKGAGADSNTAGTRLASTFLSEMSTLFEMILSQKVQVHNETG
SGLLRQLSARGKSLGLEDCAPAL
NT seq 3312 nt   +upstreamnt  +downstreamnt
atggggctgctgagctgctctgctctccacctcccagccctctggtggtacctgttcctc
tgtgctgatgcccaggaggtggccaccttcacggtgcagtaccgggtgtacgaggaggtg
ccgccgggaacggtgatagggaccctggcccagcacttcgaggggggtgagagcggggaa
atggcagatgccttccagctgatggagacccctgggaggttcccgctgcacgtggggagc
ggggacggggcgctcagcacggcagggcgggtggacagggagcagctgtgccggcacagc
gagccctgctgggtctccttcgacgtgctggctgcccggaacctggctctcattcatgtg
gaggtccgagtgctggacatcaacgaccacgcgccgcgcttccccacgcccgagctggag
ctggaggtgtcggagagcgcgtccctgcagacccggatccccttggaccgagccctggat
gccgccgccggccccaacgcccgctgctcctacagcctctcccacaacgagcactttgct
ctggaggtggtgtctggctccgacgggacgaggcacgcagagctggtggtggtcagggag
gtggaccgggagctgcgctcctccttcgacctggtgctgacggccaccgaccatggggag
ccgccgagatcagggaccgctttaatcaaagtcatcgtccttgactccaacgataacagc
cccgtctttgcagagagctctctgacggtggaggtgagggaggatgctctgcctggcacc
ctgctggtggtggtgacggccaccgaccccgaccagggccccaacggggagatcgagtac
agcctgagcaggcacgcaccccccgaggtgctgggggctttcgccatcgacgcccgctcg
ggcagcatcagcctccagcacccgctggactacgaggagacccgcgcctacgagctggac
gtgcaagcccgggacttgggtgccaaccccatcccagcccactgcaagatcctggtcaaa
gtcctggatgtcaacgacaatgctccccaggtccacgtcacctgggcggcgcgggtgccg
gtgctctccgaagccctccccagggacagcttcgtggctctggtgacaaccagcgacccc
gactcgggcagcaatgggcaggtgcactgctccctcagccaaggggacgagcacttcagg
ctgaagaagaccacaagccacagctacgtgctgatgaccaacgccacgctggacagggag
ctgcaggccgagtacaacctgacgctggtggtgcgggaccacggagacctctccttggcc
gtgcggaagcacctcaccatctgcatcagcgacgtcaacgacaatgccccggccttccag
aaggccacctatgaggttgccatcgctgagaacagtgaagcacctgcctccttgctcacc
gtccaggccaccgaccccgacctgggtttcaatggggaaatcacctacagcatcctggac
tcttccgctttgggtctggtatcgattgaccccaccactggggaggtttttgccctccaa
gcttttgattatgagcagatgaggagcctggagttcctggtgactgcggaggatggtggt
caccccaggctggcatccaatgtctccatcagggtggctgtgctggaccggaatgacaac
gcgcccgtcatcacctccccagcgctggtgggaggcacagccacgctctctgtcctggtc
cacgaggagacagggtgcttctgggtggcccctgggaatgggagcacccaagggatagca
gcagtgaccaatgccaccctcacatcatgtgctggtgctcccttcctcttcaccatcaca
gcccgggacgtggactctggcatcaacggggctctccagtatgatctggtgggtggggat
gactctgggctcttcatcttggaccccctcatggggcagctcttcctcaatgccagcaat
gccagcagcctggcgggcagccagtgggagctggtggtccgggtgagcgacaggggggac
atccccctgcacaccctggctcgggtccacctcattttccggcgtcacggggcgttctcc
aaaatctcagcctgggaaccgggatggccgagcccctcggtggtggctgttatctgcctg
gctgctctcctgggggggtgtctcctcctcttggctctgaccctatctctgcagaagaag
gagaagaaggacagcatggcctacaactgcagggaggccgaagatgcccacaggcagcag
cacctcaagaagccacacaggcagatccagaagaccgacatccaccttgtccccctgctc
cggggccggtcccgggaggctgaacccccccatcctgggggatcctcacaacctcccctc
cacctcacccccactctctacaggactctgagaaaccagaggacccaaaaagactcagac
gagcaggtggggaccttcgacctgcccatcctgcagcgtcggccctgccagccccaaagg
cccaaaaattcagccaaagaggctgccaatccccccgagaaacctggcctgggggctggg
ggacctgagcatccccagccccaccagcacatcctgaggagcctggtccggctgtcgctg
gtggcactggcagagcagagccccactggggagttcgtcatggagtcacctcccgtgcag
caaatctcccagctgctctccttgctgcaccagggccagttccagcccaaaaccaaccac
aggggaaacaagtacacggccaagaacggcagcagggctggggggctggacatggatggt
ctgagcaccaaggacagtgggcacggggagagcgaggccgaggaccgcgactccgactgc
ggctttgagctctctgtccagcagctggtgggagaggagctggagaccctcctggagcca
caggcagagctagccctcaagaggctgactgctgctgacccagcctgggtggctcgactc
tccttgcccctcaccagcagctacaaggacaacatcttctcccccgactctcttcattta
cctcaagatgaggaagctgccaggcaggagaaaccaaggacctttgagacctttggcaaa
ggtgctggggctgactccaatactgctgggacaagactggccagcactttcctttcagag
atgagcaccctctttgaaatgattttgtcccagaaggtccaagttcacaacgaaacgggc
tcggggcttctccggcagctgtcggcacgtgggaagagccttgggctggaggactgtgct
cctgctctgtag

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