Chaetura pelagica (chimney swift): 104390754
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Entry
104390754 CDS
T08631
Symbol
PCDH12
Name
(RefSeq) protocadherin-12
KO
K16499
protocadherin delta 2
Organism
cpea
Chaetura pelagica (chimney swift)
Brite
KEGG Orthology (KO) [BR:
cpea00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
cpea04515
]
104390754 (PCDH12)
Cell adhesion molecules [BR:
cpea04515
]
Cadherins
Protocadherins
104390754 (PCDH12)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_3
Motif
Other DBs
NCBI-GeneID:
104390754
NCBI-ProteinID:
XP_009998253
LinkDB
All DBs
Position
Unknown
AA seq
1103 aa
AA seq
DB search
MGLLSCSALHLPALWWYLFLCADAQEVATFTVQYRVYEEVPPGTVIGTLAQHFEGGESGE
MADAFQLMETPGRFPLHVGSGDGALSTAGRVDREQLCRHSEPCWVSFDVLAARNLALIHV
EVRVLDINDHAPRFPTPELELEVSESASLQTRIPLDRALDAAAGPNARCSYSLSHNEHFA
LEVVSGSDGTRHAELVVVREVDRELRSSFDLVLTATDHGEPPRSGTALIKVIVLDSNDNS
PVFAESSLTVEVREDALPGTLLVVVTATDPDQGPNGEIEYSLSRHAPPEVLGAFAIDARS
GSISLQHPLDYEETRAYELDVQARDLGANPIPAHCKILVKVLDVNDNAPQVHVTWAARVP
VLSEALPRDSFVALVTTSDPDSGSNGQVHCSLSQGDEHFRLKKTTSHSYVLMTNATLDRE
LQAEYNLTLVVRDHGDLSLAVRKHLTICISDVNDNAPAFQKATYEVAIAENSEAPASLLT
VQATDPDLGFNGEITYSILDSSALGLVSIDPTTGEVFALQAFDYEQMRSLEFLVTAEDGG
HPRLASNVSIRVAVLDRNDNAPVITSPALVGGTATLSVLVHEETGCFWVAPGNGSTQGIA
AVTNATLTSCAGAPFLFTITARDVDSGINGALQYDLVGGDDSGLFILDPLMGQLFLNASN
ASSLAGSQWELVVRVSDRGDIPLHTLARVHLIFRRHGAFSKISAWEPGWPSPSVVAVICL
AALLGGCLLLLALTLSLQKKEKKDSMAYNCREAEDAHRQQHLKKPHRQIQKTDIHLVPLL
RGRSREAEPPHPGGSSQPPLHLTPTLYRTLRNQRTQKDSDEQVGTFDLPILQRRPCQPQR
PKNSAKEAANPPEKPGLGAGGPEHPQPHQHILRSLVRLSLVALAEQSPTGEFVMESPPVQ
QISQLLSLLHQGQFQPKTNHRGNKYTAKNGSRAGGLDMDGLSTKDSGHGESEAEDRDSDC
GFELSVQQLVGEELETLLEPQAELALKRLTAADPAWVARLSLPLTSSYKDNIFSPDSLHL
PQDEEAARQEKPRTFETFGKGAGADSNTAGTRLASTFLSEMSTLFEMILSQKVQVHNETG
SGLLRQLSARGKSLGLEDCAPAL
NT seq
3312 nt
NT seq
+upstream
nt +downstream
nt
atggggctgctgagctgctctgctctccacctcccagccctctggtggtacctgttcctc
tgtgctgatgcccaggaggtggccaccttcacggtgcagtaccgggtgtacgaggaggtg
ccgccgggaacggtgatagggaccctggcccagcacttcgaggggggtgagagcggggaa
atggcagatgccttccagctgatggagacccctgggaggttcccgctgcacgtggggagc
ggggacggggcgctcagcacggcagggcgggtggacagggagcagctgtgccggcacagc
gagccctgctgggtctccttcgacgtgctggctgcccggaacctggctctcattcatgtg
gaggtccgagtgctggacatcaacgaccacgcgccgcgcttccccacgcccgagctggag
ctggaggtgtcggagagcgcgtccctgcagacccggatccccttggaccgagccctggat
gccgccgccggccccaacgcccgctgctcctacagcctctcccacaacgagcactttgct
ctggaggtggtgtctggctccgacgggacgaggcacgcagagctggtggtggtcagggag
gtggaccgggagctgcgctcctccttcgacctggtgctgacggccaccgaccatggggag
ccgccgagatcagggaccgctttaatcaaagtcatcgtccttgactccaacgataacagc
cccgtctttgcagagagctctctgacggtggaggtgagggaggatgctctgcctggcacc
ctgctggtggtggtgacggccaccgaccccgaccagggccccaacggggagatcgagtac
agcctgagcaggcacgcaccccccgaggtgctgggggctttcgccatcgacgcccgctcg
ggcagcatcagcctccagcacccgctggactacgaggagacccgcgcctacgagctggac
gtgcaagcccgggacttgggtgccaaccccatcccagcccactgcaagatcctggtcaaa
gtcctggatgtcaacgacaatgctccccaggtccacgtcacctgggcggcgcgggtgccg
gtgctctccgaagccctccccagggacagcttcgtggctctggtgacaaccagcgacccc
gactcgggcagcaatgggcaggtgcactgctccctcagccaaggggacgagcacttcagg
ctgaagaagaccacaagccacagctacgtgctgatgaccaacgccacgctggacagggag
ctgcaggccgagtacaacctgacgctggtggtgcgggaccacggagacctctccttggcc
gtgcggaagcacctcaccatctgcatcagcgacgtcaacgacaatgccccggccttccag
aaggccacctatgaggttgccatcgctgagaacagtgaagcacctgcctccttgctcacc
gtccaggccaccgaccccgacctgggtttcaatggggaaatcacctacagcatcctggac
tcttccgctttgggtctggtatcgattgaccccaccactggggaggtttttgccctccaa
gcttttgattatgagcagatgaggagcctggagttcctggtgactgcggaggatggtggt
caccccaggctggcatccaatgtctccatcagggtggctgtgctggaccggaatgacaac
gcgcccgtcatcacctccccagcgctggtgggaggcacagccacgctctctgtcctggtc
cacgaggagacagggtgcttctgggtggcccctgggaatgggagcacccaagggatagca
gcagtgaccaatgccaccctcacatcatgtgctggtgctcccttcctcttcaccatcaca
gcccgggacgtggactctggcatcaacggggctctccagtatgatctggtgggtggggat
gactctgggctcttcatcttggaccccctcatggggcagctcttcctcaatgccagcaat
gccagcagcctggcgggcagccagtgggagctggtggtccgggtgagcgacaggggggac
atccccctgcacaccctggctcgggtccacctcattttccggcgtcacggggcgttctcc
aaaatctcagcctgggaaccgggatggccgagcccctcggtggtggctgttatctgcctg
gctgctctcctgggggggtgtctcctcctcttggctctgaccctatctctgcagaagaag
gagaagaaggacagcatggcctacaactgcagggaggccgaagatgcccacaggcagcag
cacctcaagaagccacacaggcagatccagaagaccgacatccaccttgtccccctgctc
cggggccggtcccgggaggctgaacccccccatcctgggggatcctcacaacctcccctc
cacctcacccccactctctacaggactctgagaaaccagaggacccaaaaagactcagac
gagcaggtggggaccttcgacctgcccatcctgcagcgtcggccctgccagccccaaagg
cccaaaaattcagccaaagaggctgccaatccccccgagaaacctggcctgggggctggg
ggacctgagcatccccagccccaccagcacatcctgaggagcctggtccggctgtcgctg
gtggcactggcagagcagagccccactggggagttcgtcatggagtcacctcccgtgcag
caaatctcccagctgctctccttgctgcaccagggccagttccagcccaaaaccaaccac
aggggaaacaagtacacggccaagaacggcagcagggctggggggctggacatggatggt
ctgagcaccaaggacagtgggcacggggagagcgaggccgaggaccgcgactccgactgc
ggctttgagctctctgtccagcagctggtgggagaggagctggagaccctcctggagcca
caggcagagctagccctcaagaggctgactgctgctgacccagcctgggtggctcgactc
tccttgcccctcaccagcagctacaaggacaacatcttctcccccgactctcttcattta
cctcaagatgaggaagctgccaggcaggagaaaccaaggacctttgagacctttggcaaa
ggtgctggggctgactccaatactgctgggacaagactggccagcactttcctttcagag
atgagcaccctctttgaaatgattttgtcccagaaggtccaagttcacaacgaaacgggc
tcggggcttctccggcagctgtcggcacgtgggaagagccttgggctggaggactgtgct
cctgctctgtag
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