Chaetura pelagica (chimney swift): 104390782
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Entry
104390782 CDS
T08631
Symbol
SHPRH
Name
(RefSeq) E3 ubiquitin-protein ligase SHPRH
KO
K15710
E3 ubiquitin-protein ligase SHPRH [EC:5.6.2.-
2.3.2.27
]
Organism
cpea
Chaetura pelagica (chimney swift)
Brite
KEGG Orthology (KO) [BR:
cpea00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cpea04121
]
104390782 (SHPRH)
Enzymes [BR:
cpea01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
104390782 (SHPRH)
Ubiquitin system [BR:
cpea04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
104390782 (SHPRH)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
SHPRH_helical-1st
SHPRH_helical-2nd
Linker_histone
Helicase_C
zf-RING_UBOX
PHD
zf-C3HC4
zf-C3HC4_3
zf-C3HC4_2
zf-RING_2
zf-RING_5
PEP-utilisers_N
TPR_12
TPR_2
Motif
Other DBs
NCBI-GeneID:
104390782
NCBI-ProteinID:
XP_009998285
LinkDB
All DBs
Position
Unknown
AA seq
1678 aa
AA seq
DB search
MSSRRKRAPPSKIDEEEKKKLCWNMHEDRRNEVITLDDEITNEDHVPGPSSSTSFTVINN
ENTDENLIQKEGSGSKSVKFLTVNDEDDVYSILTPVSVQLNIIVLPYHEDGPWKALLGEF
ALHLPSEQILTDKFHERSFTLKGDPDDQLQVCVHERSEEEYSNETKEYLGAYEQCVLVQS
TLGGEILEGLRWLQKKKIIGLYQRPREVHALKVGIYLLEAGLSKPEFLSDGGGRPKKANQ
LIQKLMEKFYSFLIPDELDEDEEESDVELERQNTEELYDFVRHTHQQDIQLLREDVQHPA
LIPILRPYQSEAVNWMLHRENLSSTPSSENALHYLWREVITLDGVKIYYNSFTGCIIREY
PIAGPQWPGGILADEMGLGKTVEVLALILTHTRPDSKKDDLTLPEGKLVNFFVPPQPLEG
NKKKKTKEIELKLKEKIQYPSLRVMILAAVKEMNVKKGASIIAIFKYISATYRYDIQRNR
RLLKRALEKLITEQVVEQVKGHGLAGSFKLGKNYKEQKRRERTKEQLIAAKTQTKESRNS
DVTSEDVLKTPLQADIAMEEHDYCTPRKNNRKSKADRENSVKENNVKQEAEVPKSPGLHV
CSDVSNHPDFDISKTTPDVKQEIPKDHPSQSQEHASSSVQHTSSVFPFNTSEYRFECICG
ELGLADYKARVQCLKCHLWQHAECVNYKEENLKIKPFYCPHCLVAMKPVPTGATLIISPS
SICHQWVDEINRHVRSSSLRVLVYQGVKKHGFLQPHMLAEQEVVITTYDVLRTELNYVDI
PHSNSADGRRFRNQKRYMAIPSPLVAVEWWRICLDEAQMVECTTAKAAEMALRLSGINRW
CVSGTPVQRGLEDLYGLILFLGIDPYWVKHWWDQLLYRPFCRKNPRPLYSLIAKIMWRSA
KKDVIDQIQIPPQTENVHWLHFSPVERHFYHRQHEVCCQDALAKLRKISDWTLKLSSLDR
RTVTSILYPLLRLRQACCHPQAVRGEFLPLQKSTMTMEELLTSLQKKCRTECEEAHRQLV
CALNGLAGIHIIKGEYALAAELYREVLRSSEEHKEKLKTDSLQRLHSTHNLMELLAKHPG
IPPTLRDSRLAEEAEQLRQHYMSKSNAEVAEAHQALQPVFQTIRELQRKIHSGSPWWLDV
IQTAIQYAIDEELVQRVQNEITSNYKQQTNKLSMAEKFRDCRGLQYLLTTQLDEVKKFQK
IVREAVKNLEGPPSKQVIEAATICHLRPVRLPLNNCVFCKADELFTEYESKLFSHTVKGQ
MAIFEEMIEDEEGLVDDRLPTTSRGLWATSETERALKALLSFAKAHRMDAKLTEEGSIFL
ELYEAWKKEYKLLHEYWMVLRDHVSAIDELAMATERLRVRHPDEPKPNPPVLYIIEPHEV
EQNRVKLLNDKAVAKSQLQKKLGQLLYLTNLEKSQDKTTGGVNPEPCPICARQLGKQWAV
LTCGHCFCNECVAIIIEQYSVGSRRSSIKCAICRQTTSHKEISYVFTAETANQEDDIPVK
GSHSTKVEAVVRTLKKIQFKDPGAKSLVFSTWQDVLDIISKALYDNNMIFSQINGISKFQ
ENLSAFKYDPNINILLLPLHTGSNGLNIIEATHVLLVEPILNPAHELQAIGRVHRIGQTK
PTIVHRFLIKATIEERMQTMLKTVDRSHTSSSMKQSEASVLTVADLADLFTEETEELE
NT seq
5037 nt
NT seq
+upstream
nt +downstream
nt
atgagtagtcgtcggaaacgcgcacctccatcaaaaatagatgaggaggaaaagaaaaag
ctctgctggaatatgcatgaagaccggagaaatgaggtgataacgttagatgatgagatt
actaatgaagaccatgttccaggtccaagcagctctacatccttcactgttataaacaat
gagaacactgatgaaaatctcattcaaaaagaaggcagtggctcaaaatctgtgaagttt
ttgacagttaatgatgaagatgatgtttattccattttgactccagtgtcagtacagctg
aatattatagtcttgccgtaccatgaagatgggccctggaaggctttgttgggagaattt
gctcttcatcttccttcagagcaaattctaacagacaaattccatgagaggagctttact
ttgaaaggagaccctgatgatcagctgcaggtctgtgttcatgaaagaagtgaagaagaa
tacagtaatgaaacaaaagaatacctgggtgcttatgaacaatgtgttttggtgcaatca
actttaggtggtgaaatattggaaggcttgagatggttgcaaaagaaaaagataattgga
ctttatcaaagacctagagaggttcacgctttaaaggttggaatttaccttctggaagct
gggctaagtaaaccagagtttctgagtgatggaggtggaagacccaagaaagctaatcag
ctaattcagaaactcatggagaagttctatagttttttaattccagatgagctggatgaa
gatgaggaagaatctgatgtggaactggagagacaaaatactgaagagctttatgacttt
gttaggcacacccatcagcaggatatccagttactgagagaggatgtgcagcatcctgca
ttaattcctattctgaggccataccaaagtgaggctgtaaactggatgcttcaccgagag
aacctctcaagcactccaagcagtgaaaatgcactgcactacttatggcgagaggtcatc
actctggatggagtaaaaatctactacaattcatttactggctgtattatccgtgaatat
ccaattgctggaccccagtggcctggtggtattttggctgatgagatgggtcttggaaaa
acagtagaagtgttggctctaattctgactcatacccgaccagacagtaaaaaagatgat
ctgacattgcctgagggtaagcttgtgaacttctttgttccacctcaacctttagaagga
aataaaaagaaaaaaacaaaggaaatagagcttaaattgaaggaaaaaatacaatatccc
agcttaagagtgatgatattagcagctgtaaaggaaatgaatgtgaagaaaggagcatcc
attattgcaatatttaagtacatcagtgctacatataggtatgacatacagagaaataga
cggctgctaaaaagagctttagaaaaactaatcacagaacaagtagtagagcaagtcaaa
ggacatggtttggctgggtctttcaagctgggaaagaattacaaggaacagaagaggcga
gaaagaaccaaagagcagctgattgctgctaaaactcaaaccaaagaatcaagaaatagt
gatgtcacttctgaagatgtccttaaaacccctttacaggcggatatcgccatggaagaa
catgattattgtacacctaggaaaaataacaggaaatccaaagcagatcgtgagaactcc
gtaaaagagaataatgttaaacaggaagctgaggtcccaaagtcccctggtttgcacgtc
tgcagtgatgtgagcaatcatcctgattttgatatttctaaaactacacctgatgtcaag
caggaaatcccgaaggaccatccctcacaatcccaagaacatgccagcagtagtgtacaa
catactagttctgtatttccatttaatacctctgaatatcgttttgaatgcatctgtggt
gaacttggattggctgactataaagctcgtgtgcagtgcctgaaatgtcacttatggcaa
cacgcagaatgtgtaaactacaaagaggaaaacctgaagatcaagcccttctactgtccc
cattgcctcgtggcaatgaaacctgttcctactggagcaactctgataatttctccgagt
tctatttgtcatcagtgggtagatgagatcaaccggcatgtaaggtcatcctctcttcga
gttctggtctatcaaggagtgaagaagcatggctttttgcagccacacatgttggcagag
caggaagtggttatcaccacatatgatgtgctgcgtacagagctgaactatgtcgacata
ccccacagtaacagcgcagatgggcgccgcttcaggaaccagaagcggtacatggccatc
ccaagccccctggtagcagtggagtggtggagaatctgtcttgatgaagcacaaatggta
gaatgcactactgcaaaggctgctgaaatggcactccgtttaagtggcatcaaccgctgg
tgtgtgagtggcactcctgtgcagcgagggttagaagatctgtatggattgatccttttt
cttggaattgatccttactgggtcaaacattggtgggaccagcttttatatcggcctttt
tgtaggaaaaatcctcggcctctctacagtctgattgccaagataatgtggagatcagca
aagaaggatgtgattgaccaaattcaaatccctcctcagacagaaaatgtacactggctt
catttttctcctgtggagagacacttctatcaccgccagcatgaggtgtgctgccaggat
gcactggcaaaactcaggaagatttcagactggactcttaagcttagcagcttagataga
aggactgtgacgtctattctgtaccctttgctgcggctgaggcaggcctgctgtcatcca
caagctgttcggggagagttcttgccattacagaaaagcaccatgaccatggaggaacta
ctaacatctctgcagaagaaatgtcgaacagagtgtgaagaagctcaccggcagttggtg
tgtgctcttaatggcttagctggtatccatatcattaaaggagaatatgcactggctgca
gagctttacagagaggtattacgatcatctgaagagcacaaagaaaagctcaaaacagac
tccttgcaaagacttcactctacacacaatttgatggaattgttggcaaagcatccagga
attcccccgactttgcgtgatagccgacttgcagaagaggcagaacagcttcggcagcat
tatatgagtaaatccaatgctgaagttgcagaagcccatcaggcattacagccagttttt
cagaccattcgggagctccagagaaagatacattcaggctctccttggtggttggatgtc
atccagacagcaatccagtatgccattgatgaggagcttgttcaacgtgtgcaaaatgaa
ataaccagcaactacaaacagcagactaataaactctctatggcagagaaattccgtgac
tgcagaggccttcaatacctgctcacaacccagctggatgaagtgaagaagttccagaag
atagtaagagaagccgtgaaaaacttagaaggccctccctctaagcaggttattgaggct
gccactatctgccatttgagacctgttagacttccacttaacaactgtgtcttttgtaag
gctgatgagttgttcacagaatatgagtcgaagctcttttctcatactgttaaaggccaa
atggcgatatttgaagagatgatagaagatgaagaagggcttgttgatgaccgtttgccc
accacaagcagaggattgtgggcaaccagtgaaactgaacgtgccttgaaagctcttctc
tcctttgccaaagctcaccggatggatgctaagctcactgaagaaggcagcatatttctg
gaactctatgaagcgtggaaaaaggaatataagttacttcatgagtactggatggtactg
agggatcacgtgtctgctattgatgaactggcgatggctacggaacggctgagggtgcgt
catcctgatgagcccaagccaaatccaccagttctgtacatcatagagccacatgaggta
gagcaaaatcgagtgaagcttttgaatgacaaggcagttgccaaatcacagcttcaaaag
aaattaggacaacttctgtatctcactaatctggagaaatctcaggataaaactactggg
ggagttaacccagaaccatgtccaatctgtgcacgtcaactgggaaaacagtgggcagtg
ttgacgtgtggacattgtttttgtaatgagtgtgttgctatcatcatagaacagtacagt
gttggcagccgccggagctcaattaagtgtgccatttgcaggcaaacaacatctcataag
gaaatatcctatgtcttcactgcagaaactgcaaatcaggaggatgatattcctgtaaag
ggaagtcactccaccaaagtggaagctgtggtccgaacactgaagaaaattcagtttaaa
gatccaggagctaaatccttagttttctcaacgtggcaagatgtgttggacataatttca
aaagctttatatgacaacaacatgattttttctcagatcaatggaattagtaaatttcag
gaaaatctctctgcatttaaatatgaccccaacatcaatattttgctgctgccccttcac
actggttccaatggactaaacatcatcgaagcgactcacgttctgcttgtggaacccatt
ctgaatcctgcacatgagctacaggctattggcagggtacatcgtattggccaaacaaaa
cctaccattgttcataggttcctgataaaagcaacaatagaagagagaatgcagactatg
ctgaaaactgtagatagaagccacacgagctcttccatgaaacagtcagaagcctcagtt
ctgacagtggcagatctggctgacctttttacagaggaaactgaagaacttgagtga
DBGET
integrated database retrieval system
