Chaetura pelagica (chimney swift): 104390927
Help
Entry
104390927 CDS
T08631
Symbol
HPS1
Name
(RefSeq) LOW QUALITY PROTEIN: Hermansky-Pudlak syndrome 1 protein
KO
K20193
Hermansky-Pudlak syndrome 1 protein
Organism
cpea
Chaetura pelagica (chimney swift)
Brite
KEGG Orthology (KO) [BR:
cpea00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cpea04131
]
104390927 (HPS1)
Membrane trafficking [BR:
cpea04131
]
Endosome - Lysosome transport
Others
BLOC-3 complex
104390927 (HPS1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Fuz_longin_3
Fuz_longin_2
Fuz_longin_1
DUF2535
Motif
Other DBs
NCBI-GeneID:
104390927
NCBI-ProteinID:
XP_009998439
LinkDB
All DBs
Position
Unknown
AA seq
679 aa
AA seq
DB search
CGVCGFVTRERVPQGPALEDSLNTLFAPLIISCAALLEKLADTYTCFATERGRHLHVLHM
VGDCLYIAVNGDGTESEDELRRTLFVLRRLVEAHCGLVMLDSHLIRKEXVSTAGRHGLAH
RAPGLLGSGGGAQQPFPLPAPQAVERLIHPQLCEQCIEFLERQVVQYINTSPERGGDEVA
HAFLLVHTKLLAFCSSRNTSSIRPADLLVLILLVQDMYPSQSAEEELSPQPAPENMLPQG
PKRSESIPVSSPSSHGAAEKDSDDQDTDDLSLPEVYYTPKPSPGRDSTGSQSWLEDAEVL
TASEADAAEVQMAEDLLQTLEPLVPEASNPRRIFLDANLREGYCPLLPHTMHCLPLWPGI
SLVLLTKGATTQVAVTLYQLLDGFLVLERKLEEGPEAGAPRSYPFLAELRQRMDKFVKKL
SGQDIQLQNAWVDFKNKIFSRSETASSLEMLQAVANVKRQLCSVYRQLFLGSASHSLSQA
LRDRAQKLMREKLLDWRDFLLVKSRRNITMVSYLEDFPGLVHFVYVDRTTGQMMAPSLSV
TEKSSSELGKGPLAAFIKRKVWSLVALARRYLQKGYTTLVLQDGDYCCSYFLWFENELGY
KLEVMEVPVLSDDSPPIGMLAGDYYRKLLRYYSKNHQAEVVKCYELLTVHLGIIPSELVV
QQACDLARHLWEPSRIPLL
NT seq
2040 nt
NT seq
+upstream
nt +downstream
nt
tgcggggtgtgcgggttcgtgacccgggagcgtgtgccccagggcccggcgctggaggac
agcctcaacaccctcttcgcgccgctcatcatctcctgcgccgcgctgctggagaaactg
gccgacacctacacctgcttcgccaccgagcgcgggcggcacctccacgtcctgcacatg
gtgggggactgcctgtacatcgccgtgaacggtgacgggacggagagcgaggatgagctg
cgccggacgctgttcgtgctgcggcgcttggtggaagctcattgcgggctcgtcatgctc
gactcccacctcatccgcaaggagtgagtgagcacggccggccggcacgggttggcacac
cgggctcctgggctgcttggctctggagggggggctcagcagccgttcccccttcctgcc
ccccaggccgtggagcggctgattcacccccagctgtgcgagcagtgcattgaattcctg
gagcgacaggtcgtgcagtacatcaacaccagcccagagcgagggggggacgaggtggcc
catgccttcctactggtgcacaccaagctgctggccttctgctccagccgcaacaccagc
tccatccggcctgctgacctgctcgtcctcatcctcctggtgcaggacatgtaccccagc
cagagtgccgaggaagagctcagtccccagcctgcaccagagaatatgctcccccaggga
cccaagagaagtgagagcatccctgtgagcagccctagctcccatggagctgcagagaag
gactcagatgaccaggacacagatgatctctcactgcctgaggtttactacacgcccaag
ccctcaccaggcagggacagcacaggcagccagagctggttagaggacgctgaggtgctg
actgctagtgaggcagatgctgcagaagtccagatggcagaggacttgctgcagaccttg
gagcctttggtccctgaagcttcaaatcccagaaggatctttctggatgccaacctgcgt
gaaggttactgccccttgctgccacacaccatgcactgcctcccgctctggccgggcatc
tcccttgtcctcctgaccaagggtgccacaacccaggtggccgttactttataccagcta
ctggatggtttcttggtgctggagaggaagctggaagaggggccagaagcaggagcccca
cgctcctacccatttctggctgagctgcggcagcgcatggacaagtttgtgaagaagctg
agtggtcaggacatccagctgcagaatgcctgggtggacttcaagaacaagatattctcc
cgaagcgagactgcaagctccttggagatgctgcaggcagtggccaatgtgaagcggcag
ctctgctccgtctaccgccagctcttcctgggctctgccagccatagcctgtcccaggcg
ctgcgggaccgtgcccagaagctgatgagggagaagctgctggactggcgggactttcta
ctggtgaagagcaggcgcaatatcaccatggtgtcatacctggaggactttcctggcctt
gtgcactttgtctatgtggaccgcacgactgggcagatgatggcaccatcactcagtgtg
acagagaagtccagctcagagctgggcaagggccccctggctgccttcatcaagaggaag
gtctggtccctggttgcattggcccggcgatatctacagaagggctacacgacacttgtg
ctgcaggatggtgactactgctgttcctacttcctctggtttgagaatgagctgggctac
aagctggaggtgatggaggtgccagttctctcagatgattctcctcctattggaatgctg
gcaggagactactacaggaagctactgcgttactacagcaagaaccaccaggcagaggta
gtgaagtgctacgagctgctgactgtgcacctgggcatcattccctctgagctcgtggtc
cagcaggcctgtgacttggcccggcacctctgggagccctcccgcatccccctgctctga
DBGET
integrated database retrieval system
