Chaetura pelagica (chimney swift): 104390961
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Entry
104390961 CDS
T08631
Symbol
TAF5
Name
(RefSeq) transcription initiation factor TFIID subunit 5
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
cpea
Chaetura pelagica (chimney swift)
Pathway
cpea03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
cpea00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
104390961 (TAF5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cpea03021
]
104390961 (TAF5)
03036 Chromosome and associated proteins [BR:
cpea03036
]
104390961 (TAF5)
Transcription machinery [BR:
cpea03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
104390961 (TAF5)
Coactivators
SAGA/TFTC/STAGA complex
104390961 (TAF5)
Chromosome and associated proteins [BR:
cpea03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
104390961 (TAF5)
STAGA complex
104390961 (TAF5)
TFTC complex
104390961 (TAF5)
SAGA complex
104390961 (TAF5)
SLIK complex
104390961 (TAF5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR5
WD40
Beta-prop_WDR3_1st
Beta-prop_THOC3
WD40_Prp19
TFIID_NTD2
WD40_CDC20-Fz
Beta-prop_WDR3_2nd
WD40_WDHD1_1st
Beta-prop_CAF1B_HIR1
WD40_Gbeta
Beta-prop_WDR36-Utp21_2nd
Beta-prop_TEP1_2nd
EIF3I
Beta-prop_EML_2
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
WDR55
Beta-prop_WDR36-Utp21_1st
NBCH_WD40
WD40_MABP1-WDR62_1st
Beta-prop_WDR75_1st
ANAPC4_WD40
Beta-prop_TEP1_C
Beta-prop_IFT122_1st
WDR90_beta-prop_4th
Beta-prop_Aladin
Beta-prop_RIG_2nd
Beta-prop_SCAP
Beta-prop_VPS8
Beta-prop_WDR41
Beta-prop_IFT140_1st
Beta-prop_Vps41
Beta-prop_EIPR1
WD40_RFWD3
Beta-prop_DCAF4
Beta-prop_HPS5
Beta-prop_WDR19_1st
Beta-prop_DCAF12
Beta-prop_SPT8
WD_LRWD1
Beta-prop_Nup120_160
Tricorn_2nd
PEP5_VPS11_N
CDK5RAP3
Beta-prop_ACSF4
RAB3GAP2_N
eIF2A
VPS8_N
VID27
Motif
Other DBs
NCBI-GeneID:
104390961
NCBI-ProteinID:
XP_009998472
LinkDB
All DBs
Position
Unknown
AA seq
632 aa
AA seq
DB search
MSEFQQIYEVSLFLVSVVGGGVVVEDQPDVSAVLSAYNQQGDPTLYEEYYSGLKHFIECS
LDCHRAELSQLFYPLFVHMYLELVYNQHESEAKSFFERFHGDQECYYQDDLRVLSSLTKK
EHMRGNETMLDFRTSKFVLRISRDSYQLLKRHLQEKQNNQIWNIVQEHLYIDIFDGMPRS
KQQIDAMVGSLAGEAKREANKAKVFFGLLKEPEFDVPLDDEDEEGENEEGKPKKKKPKKD
SAGSKSKKQDPNAPPQNRIPLPELKDSDKLDKVMNMKEAARRVRLGPECLPSICFYTFLN
AYQGLTAVDITDDSSMIVGGFADSTVRVWSVTPKKLRSVKTAADLSLIDKESDDVLERIM
DEKTASELKILYGHSGPVYGTSFSPDRNYLLSCSEDGTVRLWSLQTFTCLVGYKGHNYPV
WDTQFSPYGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVTCTRFHPNSNYIATGSAD
RTVRLWDVLNGNCVRIFTGHKGPIHSLAFSPNGRFLATGATDGRVLLWDIGHGLMVGELK
GHTDTIYALRFSRDGEILASGSMDNTVRLWDAVKAFEDLETDDFTTATGHINLPENSQEL
LLGTYMTKSTPVVHLHFTRRNLLLAAGAYSSQ
NT seq
1899 nt
NT seq
+upstream
nt +downstream
nt
atgtctgagtttcagcaaatatatgaagtcagcttgttcctggtatcagttgttggagga
ggcgttgttgtggaagatcagccagatgtgagtgcagtattgtctgcctacaatcagcaa
ggggaccctacactctatgaggaatactacagtggattaaaacacttcattgagtgttcc
ctggactgtcatcgagcagaattgtctcagctgttttatccactctttgtgcacatgtac
ttggaattggtctacaatcaacatgagagtgaagctaagtctttttttgaaagatttcat
ggggatcaggagtgctattaccaggatgacctgcgtgtattatctagcttaaccaagaaa
gaacatatgagaggtaatgaaaccatgctggatttccgaacaagcaagtttgtgctgcgt
atttcccgtgactcttaccagctcttgaagaggcatcttcaggaaaaacagaacaatcag
atctggaacattgttcaggaacatctttacattgatatatttgatggaatgcctcgcagt
aaacaacagatagatgccatggttggaagcttggctggggaggcaaaacgagaggcaaat
aaagcaaaggttttctttggcttattgaaagaaccagagtttgatgtgcctttggatgat
gaagatgaagaaggagaaaatgaggaaggaaagccaaagaagaaaaaacctaaaaaagat
agtgcagggtcaaaaagtaaaaaacaagaccctaatgctccacctcaaaacaggattcct
ctgcctgaactgaaagactctgacaagctggataaagtaatgaatatgaaggaagctgca
agacgtgtgcgtcttggcccagagtgcctgccctccatctgtttctacacgttccttaat
gcttaccagggtctgactgctgtggatattacagatgactctagcatgattgtaggaggc
tttgctgactctactgtcagagtgtggtctgtgactcccaaaaagctacgtagtgtgaaa
acagcagcagacctcagtctcattgacaaagaatcagatgatgtcttagagaggatcatg
gatgagaaaacagcaagtgagttgaagattttatatggtcacagtggacctgtctatggc
accagcttcagtcctgataggaactacctcttgtcctgttccgaggatggtactgtcaga
ttgtggagtctccaaacattcacatgtttggtgggatataaaggacacaactatccagta
tgggatacacaattctctccttacggttattactttgtgtcagggggacatgacagagtg
gctcggctgtgggcaacagatcactaccagcctttacggatatttgctggccatcttgct
gatgtgacttgtacccgatttcatccgaactctaactatattgccacaggctcagcagac
aggactgtacggctctgggatgtattgaatgggaattgtgtaagaatattcactggacat
aagggaccaattcattcactggcattttctcccaatggacgattcctggctactggagca
acagatggaagagttctgctgtgggatattggacatggcttgatggttggagaattgaag
gggcacactgacactatctatgcgctaagattcagtagagatggggagattttagcatca
ggttcaatggataacacagttcgtctgtgggatgctgtgaaagcatttgaagatttagaa
accgatgactttactacagccactggacatataaacttgcctgaaaactctcaggagttg
ttgctaggtacatacatgaccaaatcaaccccggtcgtgcacctccatttcacacgcagg
aacttgctgctggctgcaggtgcctacagttcacagtaa
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