Chaetura pelagica (chimney swift): 104391008
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Entry
104391008 CDS
T08631
Symbol
RNF43
Name
(RefSeq) E3 ubiquitin-protein ligase RNF43
KO
K15694
E3 ubiquitin-protein ligase RNF43 [EC:
2.3.2.27
]
Organism
cpea
Chaetura pelagica (chimney swift)
Pathway
cpea04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
cpea00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
104391008 (RNF43)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cpea04121
]
104391008 (RNF43)
Enzymes [BR:
cpea01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
104391008 (RNF43)
Ubiquitin system [BR:
cpea04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
104391008 (RNF43)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ZNRF_3_ecto
zf-RING_2
zf-RING_11
zf-C3HC4_2
zf-C3HC4
zf-rbx1
zf-RING_UBOX
zf-RING_5
zf-ANAPC11
KIAA1549
zf-C3HC4_3
Motif
Other DBs
NCBI-GeneID:
104391008
NCBI-ProteinID:
XP_009998521
LinkDB
All DBs
Position
Unknown
AA seq
636 aa
AA seq
DB search
MWDVKVVVMSTTGVSYILWAVSYSTEFVVGSSHPLQSWTPRSEFPFAFVLQSHPLSLCNT
SEDEHTESGFITIVKLEQPDRDPNPCLSLANKAKLAGERGARAILFDITDDESAADQLRK
PRGLSQPVVLIRGHDAELLMGVVNKNREAHVKIEVKEPPAWPDYDVWILLTVVSTVVVII
LIFVVRTKCQLNRTQDSLQQQTLQAIGRLATRRYQPRCRQASRWDSGSSCSSAPVCAICL
EEFSEGQELRIISCSHEFHQECVDPWLQQHHTCPLCMFNILPRDSVDQATAAGSRLASPD
LGPGRRLHLFRQHPGHALYHLPHAYPQRNLRSFPPEPAHGNPFFHSPELSQLDFGTIHYM
PYRPATSLLTCGHPSPLALGLLGQQHPSPSACGQMLPPQRTCSLQPQPPCLGLKAAQVQK
QHRGPTLRRGLSHGHQHNSSGSGESYLTEHSGYLADGPGSDSSSGPCHGSSSDSMLNCTD
VSLQGIHGSCSTFRSSLSSDYDPFVYCSSEGPAMDNGQEQPWLPREMRPRSLDLMVPGGA
ALAKPQVLSHVHYHHHQHHHYRRDPECPPRQAGQGPGQHKSRYSGAKQSGEREGFAEGTL
AARGPGTFMDLKRRSRMSMNTQFDKTLACLLTGELE
NT seq
1911 nt
NT seq
+upstream
nt +downstream
nt
atgtgggatgtcaaagtggtggtgatgtctaccacaggggtgtcctatatcctctgggca
gtttcttacagcacagaatttgtggtgggctcgagtcaccctttgcagtcctggacccca
agatctgagtttccctttgcttttgtcctgcagtcacacccactgtccctgtgcaacacc
agtgaggatgaacacaccgagtcgggattcatcaccattgtcaagctggaacagccagat
cgggatcccaacccttgcctgtcgctggctaacaaggcaaagctggcaggggagcgtgga
gcccgcgcaatcctttttgacatcactgatgatgaaagcgctgctgatcagttgagaaag
cctcgaggtctgagtcagcctgtggttctgatcaggggccatgatgctgagcttctcatg
ggtgtcgtgaacaagaacagagaggcccatgtgaagatagaggtcaaggagccaccagct
tggccagactacgatgtgtggattcttctcacggtggtcagcactgtggtcgtcatcatt
ttgatttttgttgtccgcacaaagtgccagctgaacaggactcaggactccctgcagcag
cagaccctgcaggccatcgggcggctggccacgcggaggtaccagcccaggtgccggcag
gcgtcgcgctgggactcgggcagcagctgcagctcagccccagtctgtgccatctgcctg
gaggagttcagcgagggccaggaactgcggatcatctcatgctcccatgagtttcaccag
gagtgtgttgacccctggctacagcagcaccacacgtgtccactttgcatgttcaatatt
ctacccagagattcagtggaccaggctacggctgctggctccaggctggcctctccggac
ctggggcccggacggcggcttcaccttttccgccagcacccaggacatgccctttaccac
cttccacatgcgtatcctcagaggaacctcaggagctttcccccggagccagctcatggc
aatcccttcttccactccccagagctttcccagctggattttggcactatccactacatg
ccctacagaccagccacctccctgctcacctgtggccacccgtccccgctggccctgggc
ttgctgggccagcagcaccccagcccctcagcctgtgggcagatgctgccaccccagagg
acttgttctctccagccccagcctccctgcctggggctcaaggcagcccaggtgcagaag
cagcaccggggccctacactgcgccgggggctcagccatgggcaccagcacaacagcagt
ggctccggggagagttatctcacagagcacagcgggtacctggcagatgggccgggcagt
gactccagctcagggccctgccacggttcctccagtgactccatgttgaactgcacagac
gtcagtctgcagggcatccacggcagctgctccacgttccgcagctccctcagcagtgac
tatgatccctttgtctactgcagctcagagggacctgccatggacaatggccaggagcag
ccgtggctcccaagggagatgcggcccaggtccttggacctgatggtgcctgggggtgct
gctctggccaagccccaggtgctcagccacgtccattaccaccaccaccagcaccatcac
tacagaagagacccagagtgtccacccaggcaggctgggcaggggcctgggcagcataaa
tcccggtactctggggccaagcaatctggtgaacgagaggggtttgctgaaggtactttg
gctgccaggggacctggtaccttcatggatctgaagaggaggtccaggatgtccatgaac
actcagtttgacaaaacactggcctgtttgcttactggagagctggagtga
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integrated database retrieval system
