Chaetura pelagica (chimney swift): 104391069
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Entry
104391069 CDS
T08631
Symbol
HTT
Name
(RefSeq) huntingtin
KO
K04533
huntingtin
Organism
cpea
Chaetura pelagica (chimney swift)
Brite
KEGG Orthology (KO) [BR:
cpea00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cpea03019
]
104391069 (HTT)
04131 Membrane trafficking [BR:
cpea04131
]
104391069 (HTT)
03029 Mitochondrial biogenesis [BR:
cpea03029
]
104391069 (HTT)
Messenger RNA biogenesis [BR:
cpea03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
104391069 (HTT)
Membrane trafficking [BR:
cpea04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
104391069 (HTT)
Mitochondrial biogenesis [BR:
cpea03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Other regulator of mitochondrial biogenesis
104391069 (HTT)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Htt_C-HEAT
Htt_N-HEAT
Htt_bridge
Htt_N-HEAT_1
HEAT
HEAT_GCN1
HEAT_EF3_N
Motif
Other DBs
NCBI-GeneID:
104391069
NCBI-ProteinID:
XP_009998595
LinkDB
All DBs
Position
Unknown
AA seq
3187 aa
AA seq
DB search
MRHAKPRITELELRDSTDKCPVLLVPTLEFGQCLWLRPEGSLERGGEAGGDPLGSVRLWQ
GRQQRAGGCGSRRSPGCSGGAGRGAGLPARNGLRGRPVGPAAPPPRQQGALRHSCPAGTR
TPRPGKKELSTTKKDRVNHCLTICENIVAQSLRNSPEFQKLLGIAMELFLLCSEDTESDV
RMVADECLNKVIKALMDSNLPRLQLELYKEIKKNGASRSLRAALWRFAELAHLVRPQKCR
PYLVNLLPCLTRISKRPEESVQETLAAAIPKIMAAFGNFANDNEIKALLKAFIANLKSSS
PTIRRTAAGSAVSICQHSRRTQYFYAWLLNVLLGLLVPVEDDHPTLLILGVLLTLRYLIP
LLQQQVKDTSLKGSFGVTRKETEISPSPEQLIQVYELTLYYTQHQDHNVVTGALELLQQL
FRTPPPELLHALTASGGIAQVSVSRDESASRSRSGSIVELIAGGGSSCSPVLARKHKGKI
LLGEEEGLEDDPETRSDVSSASFAASVKGEITSELATSSGVSTAGSVGSSSADSTGHDII
TEQPRSQHTLQSDSVDLPSCDLTSTTTEGEEDDVLSRSSSQISAVQSDPTMDLNDGTQAS
SPISDSSQTTTEGPDSAVTPSDSSEIVLEGAEGQYSGMQIGQLQDEEDEAANILQDDSSE
SFRNSSIALQQPHLLKTMSHSRQPSDSSVDRFTSKEDAADSGDHENKPSRVKGDIGHYTD
ENSAPLVHCVRLLSASFLLTGEKGALVPDRDVRVSVKALAVSCVGAAVALHPESFFSKLY
KTPLEAMGEEYEEQYVSDILNYIDHGDPQIRGATAILCGTIVNSILIKSRFDVEKWLINV
RCSTGNLFSLVDCIPLLQKTLKDESSVTCKLACTAVRHCIMSLCSSSYSELGLQLIVDLL
TLKNSSYWLVRTELLETLAEVDFRLVSFLEGRTESLHRGVHHYTGLLKLQERVLNDVVIC
LLGDEDPRVRHVAAASLMRLVPKLFYNCDQGQADPVVAVVRDQSSVYLKLLMHETQPPSH
FAVSTITRTYRGYNMLQSPTDVTMENNLSRVIAAISHALTISTTRALTFGCCEALCLLST
TFPVCTWSVGWHCGVSQPSPSDEAQKGCTIGMAGMVLSLLSSAWFPLDLSAHQDALILTG
NLLAACAPRCLKNPWSAEEDSNQGAAKQEEPWPALADRALISLVEQLFSHLLKVINICAH
VMDDVAPGPSVKAALPSLTNPPSLSPIRRKGKERESVEQSSVPMSPKKGGEASPATRQTD
ATGPVPTSKSSSVGSFYHLTSYLKLYDVLKATHANYKVTLDLQNSNEKFGCFLRSALDVL
SQILELATLQDIGKCVEEILGYLKSCFNREPTMATVCVQQLLKTLFGTNLASQYDGLSSN
PNKAQGKAQRLGSSNLRPGLYHYCFMAPYTHFTQALADASLRNMVQAEQEHDASGWFDVL
QKVSTQLKTSITSAAKHRADKNAIHNHIRLFEPLVIKALKQYTTTTSVQLQRQVLDLLAQ
LVQLRVNYCLLDSDQVFIGFVLKQFEYIEVGQFRESEAIIPNIFFFLVLLSYERYHSKQI
IGIPKIIQLCDGIMASGRKAVTHAIPALQPIVHDLFVLRGTNKADAGKELETQKEVVVSM
LLRLIQYHQVLEMFILVLQQCHKENEDKWKRLSRQIADIILPMLAKQQMHIDSHDALGVL
NTLFEILAPSSLRPVDMLLRSMFVTPKTMASVSTVQLWISGILAILRVLISQSTEDIVLS
RIQELSFSPYLISCQAINRLRCGENNAAAPEDHTEVKQAKYLPEETFSRFLLQLVGILLE
DIVTKQLKVDMNEQQHTFYCQELGTLLMCLIHIFKSGMFRRITAAATRLFTGDGSDGSFY
TLESLSDLVQSMIPTHPSLVLLWCQILLLVNYTNYNWWSEVHQTPKRHSLSTTKLLSPQI
SGDSDESNSVSKRGMCNREIVRRGALILFCDYVCQNLHDSEHLTWLIVNHVQDLINLSHE
PPVQDFISAVHRNSAASGLFIQAIQSRCENLAAPTTLKKTLQCLEGIHLSQSGAVLTLYV
DKLLCTPFRVLARMVDMLACRRVEMLLAATLQNSITQLPVEELDRIQEYLQNSGLATRHQ
RLYSLLDRFRLMVAPDTTSPSPLVTSHPLDGEDQPALENVILDKDWYVSLVRSQCWIKSD
SALLEGAELVNRIPQPDLNSFMTSKEFNLSLLAPCLSLGMNEISRDQRSSFFETARRVTL
DHVSTTVQNLPANHQVFQPLLPTEPSAYWKKLSDIFGDEVMYQSMMTLCRALAQYLLLLS
KLPAGLRVPSDKEDDILKFMVMSVEALSWRLMHDQIPLSIDLQAALDCCCLTLQQPSLWN
LLASAVNVTYACSLINCIRFIIEAVAVEPGNQLLSPERKKNTSKGLIEGEVDSNTQKTKH
IAAACEMVAEMVECLQTVLSLGHKRNSCIPAFLTPVLKNIIISLARLPLVNSYTRVPPLV
WKLGWSPKPAGDFGTVFPEIPVEFLQEKEIFKEFIYRINTLGWISRTQFEETWATLLGVL
VTQPIVMDQEENQQEEDTERTQINVLAVQAITSLVLSAMTIPVAGNPAVSCLEQQPRNKA
LKALDTRFGRKLSVIRGIVEREIQAMVSKRDNIATHHLYQAWDPVPSLSPATTGALISHE
KLLLQINTEREIGDMDYKLGQVSIHSIWLGNNITPLREEEWGEDEEDENDIPAPSSPPTS
PINTRKHRAGVDIHSCSQFLLELYSQWILPSNPSKRTPVILISEVVRSLLAVSDLFTERN
QFEMMYTTLTELRKVHPSEDEILVQYLIPATCKAAAVLGMDKAVAEPVSRLLESTLRSTH
MPSRIGALHGILYILECDLLDETAKQLIPIISEYLLSNLRGVAHCVNIHNQQHILVMCAA
AFYLIENYPLDVGPEFSAGIIQMCGVMVSGSDESTPSIIYHCVLRGLERLLLSEQLSRLD
SESLVKLSVDRVNVQSPHRAMAALGLMLTCMYTGKEKISPSRNTDANPSAPDSESVIVAM
ERVSVLFDRIRKGFPFEARVVARILPQFLDDFFPPQDVMNKVIGEFLSNQQPYPQFMATV
VYKVFQTLHSTGQSSMVRDWVMLSLSNFTQRTPVAMAMWSLSCFFVSASTSQWISAILPH
IISRMGKSEQVDVNIFCLVAIDFYRHQIDEELDRRAFQSVFEVVASPGTPYHRLLTCLQN
VHKVTAC
NT seq
9564 nt
NT seq
+upstream
nt +downstream
nt
atgagacacgcaaaaccacggatcactgagttagaattgagagactccactgataagtgt
cccgttcttctcgttcctacgctggaattcgggcagtgcctgtggctgcggcccgagggg
tcgctggaaaggggaggggaagctggcggggaccccctgggcagcgtcaggctctggcag
ggccggcagcagagggcaggaggctgtggctcccggcgcagccccgggtgctccggaggg
gcgggtcggggtgcgggtctccccgcccggaacgggttgcggggccggcccgtgggacct
gcggcgcctcctccccggcagcagggggcactgcggcacagctgcccggcgggcactagg
accccgcggcctggaaagaaagaactttcaactaccaagaaagatcgagtgaatcattgc
ctaacaatatgtgaaaacatagttgctcagtctttaagaaattctccagaattccagaaa
ctgctggggattgctatggaactctttctcctctgcagtgaggatacagaatctgatgtc
cggatggttgctgatgaatgccttaataaagttattaaagctttgatggattccaatctt
cctaggttacaattagaactgtataaagagattaaaaagaatggtgcttccagaagtctg
cgtgctgcactctggagatttgctgagcttgcccatctagttcggcctcaaaagtgcagg
ccatacttagtgaaccttttgccctgtctaacacggataagtaagagacccgaagagtcg
gtacaggagacactagctgcagcaataccaaaaatcatggcggcctttggcaattttgca
aacgacaatgagattaaggctttattgaaggctttcatagctaatctgaaatcgagctcc
cctactatccgtcgaacagcagcaggatcagcagtgagcatctgtcaacattcacgaaga
acacagtatttctatgcctggttattgaatgtacttttaggcttgttggttcctgtagaa
gatgatcatcctactcttctaattctgggtgttttacttacactaagatatctcatacct
ttattgcaacaacaagtaaaggataccagcctgaaaggcagttttggagtaacaagaaaa
gaaacagagatttcgccttccccagaacaacttatacaggtttatgaattgactctgtat
tacacccagcatcaggaccataatgttgtgactggagctttagagttattacaacagctc
tttagaacaccaccacctgaacttctccatgccctgactgcttcagggggcattgcacag
gtcagtgtatccagagatgaatctgccagcaggagccgcagtgggagcatcgtggaactt
attgctggaggggggtcttcatgcagccctgttcttgcaagaaaacataaaggtaaaata
ctacttggtgaagaagaaggtttggaggatgatcctgaaacccgctcagatgtcagctct
gcatcctttgcagcttctgtgaagggtgagataaccagtgaactagctacttcatcagga
gtatcaacagctgggtcagtagggagttcatctgctgattctacaggacatgacatcatc
acggagcagccacgttcccaacatacgctgcagtcagactctgtagacctgccaagctgt
gatttgacaagtacaaccactgaaggggaagaagatgatgtgcttagccgaagctccagc
cagatcagtgctgtccagtcagatcctactatggacttgaatgatgggacacaggcttcc
tcaccaattagtgatagctctcagactactaccgaaggtccagactctgctgtaacacct
tctgacagttctgaaattgttttggaaggtgccgaaggacagtactcaggaatgcagatt
gggcaactgcaggatgaggaagatgaggctgcaaatattctccaagatgattcatctgag
tctttcagaaattcttctattgctctgcagcagcctcacctgttgaaaaccatgagccat
agtaggcagccttctgatagcagtgtggatagatttacatcaaaagaagatgcagcagat
tctggtgatcatgaaaataagccctccagagtgaaaggagacataggtcactataccgat
gaaaattctgctcctttagtgcactgtgttaggcttctgtcagcctctttcctacttacg
ggtgagaaaggagctttagttcctgacagagatgtgagagtcagtgtaaaagccctggca
gtaagttgtgttggagcagctgttgctcttcaccctgagtctttcttcagcaaactgtat
aaaacacccctggaagcaatgggagaagagtatgaggagcagtatgtgtcagatattctg
aactacattgaccatggagatccccagattagaggagctactgccattctgtgtggaaca
attgtcaactccattctaattaaatcccgctttgatgtggaaaaatggctcatcaatgtc
agatgctcaacaggaaatctcttttccttggtagactgcatacctctgttacagaaaaca
ctgaaggatgagtcctctgttacatgcaaactggcttgtacagctgtgagacattgcatc
atgagcttatgtagtagcagttacagtgaactaggtttacaattaattgttgacctcctt
acactgaagaatagctcatattggctagtaaggactgaacttctggaaacacttgcagag
gtagattttcggctagtcagcttcttggagggaagaactgagagcttgcacagaggtgtt
catcattatactggtctactgaaacttcaggagagagtgcttaatgatgttgtaatatgt
ctgcttggagatgaagatccaagagtgagacatgtagctgcagcttcattaatgaggctt
gttccaaagctattttataactgtgatcaaggacaagccgatccagttgtggcagtagta
cgggaccagagcagtgtctacctgaaactattaatgcatgagactcagcctccttctcac
tttgcagtgagcacaatcaccagaacatacagaggttacaatatgctgcaaagtccaaca
gatgtcactatggaaaataatctatcaagagttattgcagcaatttcccatgcattgaca
atatccactacaagagcacttacatttggctgctgtgaagctttgtgtcttctctccaca
acatttccagtgtgcacctggagtgtgggatggcactgtggtgtttcccagccaagtcct
tcagatgaagctcagaaaggctgcaccattggaatggctggcatggtcctgtctctcctt
tcatcagcatggttcccactggacctctctgcacatcaggatgctttgattttgactgga
aacttgcttgcagcatgtgctcctaggtgcttaaagaatccctggagtgctgaagaagat
tcaaaccaaggtgctgcaaagcaggaggaaccctggccagctctggcagatcgagctctg
atttctttagtagaacaacttttttctcatctgctcaaggtcattaatatttgtgcccat
gtaatggatgatgttgctcctggcccatcagtaaaggcagcgttgccttctctcacaaac
ccaccttctcttagtccaattcggagaaaggggaaagagagagagtctgttgagcagtca
tctgtgccaatgagccctaaaaagggtggtgaagcaagtccagccactaggcaaactgat
gctactgggcctgttccaacaagtaaatcatcttcagtaggaagcttttatcatcttaca
tcgtatctgaagttgtacgatgtcttgaaagcaacccatgctaattataaggttactttg
gatctccagaacagtaatgaaaagtttggatgtttcttacggtctgccttagatgttctg
tctcaaattttggaactcgctactcttcaagatattggaaagtgcgtagaagaaattttg
ggttacctaaaatcgtgtttcaacagagaaccaacaatggcaacagtttgtgtacagcag
ttattgaagacattgtttgggacaaatctggcttctcagtacgatggcttgtcttcaaac
cccaacaaagctcaaggcaaagctcagcgcttgggttcttccaatctgagacctggtctc
tatcattactgcttcatggcaccatacacacatttcacacaggcccttgctgatgctagt
ctaaggaacatggttcaagctgagcaggaacacgatgcttcaggatggtttgatgtgctg
cagaaagtttctacgcagctgaaaactagcataaccagtgcagcaaaacatcgtgctgat
aagaatgctattcacaatcacattcgtttatttgaaccccttgtcataaaagcattgaaa
caatacacaacaacaacatcagtacagctgcagagacaagttctagatttgcttgctcaa
ctggttcagctacgagttaactactgtcttctggattcagatcaggtttttattggattt
gtgctaaagcagtttgaatacattgaagtaggacagttcagggagtctgaagcaattatt
cctaatatcttctttttcctggtgttgctgtcttacgagcggtatcattccaagcagata
atcggaattcccaagatcattcaattgtgtgatggtatcatggccagtgggagaaaagct
gttacacatgcaataccagctctgcaacccattgttcatgacctctttgtgttgagagga
acaaataaagcagatgctggaaaagagttggaaacgcaaaaggaggtggtagtgtcaatg
ctgctgagacttattcagtaccatcaggtgctagaaatgttcatcttagtattgcagcag
tgtcataaagaaaatgaagacaaatggaaaagattgtcacgtcaaatagctgacattatt
ctcccaatgcttgcaaaacaacagatgcatatagactctcatgatgctctgggagtactg
aacaccttgtttgaaattttggctccttcctcccttcgccctgtggatatgcttttaagg
agtatgtttgttactcctaaaacaatggcatcagtgagcactgtccagctatggatttct
ggaattttagctatccttagagttctgatttcacagtcaacagaagacattgttctgtcc
cgtatacaagagctttccttctcaccgtatttgatttcatgtcaagcaattaacagactg
agatgtggggaaaataatgcagctgcaccagaggatcacactgaggttaaacaggctaaa
tacctgcctgaagagacattttctaggttcttattacaactggttggcattctactggaa
gatattgttaccaaacaattgaaagtggacatgaatgagcagcagcatactttctactgc
caggagctgggcacactgcttatgtgcttaatacatatcttcaaatcagggatgtttaga
agaatcacagctgcagctaccaggcttttcacaggagatggatcagatggtagtttctat
acccttgaaagtttgagtgaccttgttcaatccatgattcccacacacccttctttagtt
ctcctctggtgtcaaatcctgcttcttgtcaattataccaactacaactggtggtcagaa
gttcatcaaaccccaaagagacacagtctttctacaactaaattgcttagccctcagata
tctggagacagtgatgaatcaaattcagtgtctaaacgtggcatgtgcaatcgagagata
gtgagaagaggagcactcattcttttttgtgactatgtttgtcaaaacctgcatgattca
gaacacttgacctggcttattgtgaatcacgttcaagacttgattaatctgtcccatgag
cctccagtacaggacttcattagtgctgtgcacaggaactcggcagccagtggtctcttc
atccaggccattcagtcacggtgtgagaatcttgcagctcccacaactctgaagaagact
ttgcagtgcttagagggaatacatctcagccagtctggggctgtcctaacactgtatgtt
gataagctcctgtgtaccccattccgtgtgcttgctcgcatggttgacatgctggcttgt
cgtcgagttgaaatgcttttggctgcaactttacagaacagcattactcagttaccagtt
gaagaactggatagaattcaggaataccttcagaacagtggattagcaacaagacaccaa
agactttactcactcttggataggtttcgtcttatggtagcaccagacacaactagtcct
tcacctctggttacctcacacccactagatggagaagaccaaccagctttagagaatgta
atcctagacaaagactggtatgtgtctctagtgaggtcacagtgttggatcaagtctgac
tcggcactgctagaaggtgcagagctggtaaataggattcctcagcctgacctgaactcc
ttcatgaccagcaaggaattcaacctaagcttgttagcaccttgtttaagccttggcatg
aatgaaatatcaagagaccaaaggagcagcttctttgaaacagctcggagggtaactctg
gatcatgtgtctaccactgtgcaaaaccttcctgccaaccaccaggtttttcaaccgctg
ttgccaactgagccatcagcctactggaaaaaactaagtgatatctttggagatgaagtc
atgtatcagtctatgatgaccctatgtcgtgcactggctcagtatttgttgttactctca
aaactaccagctggtctccgtgttccttctgacaaagaggatgatatcctgaaattcatg
gttatgtcagtagaggcactgtcatggcgtttaatgcatgaccagatcccactgagtata
gatcttcaagctgctctggattgttgctgtctgacattacagcagcctagtctttggaat
ttactggcttctgcagttaatgtgacatatgcgtgctccttaattaattgcattagattt
atcatagaagcagttgcagttgaacccggtaatcaacttcttagtcctgaaagaaagaag
aatacatcaaaaggcttaattgagggtgaagttgattcaaacacacagaaaactaaacac
attgctgcagcttgtgaaatggtagctgagatggtggaatgcttacagactgtcttgtcg
ctggggcacaaaagaaacagctgtattccagcctttctgactcctgtcctcaagaatatc
atcatcagtttagcaaggctgcctctagtgaacagctatacaagagtacctcccttggtc
tggaaattaggctggtcaccaaagcctgcaggtgactttggcacagtttttcctgaaatc
ccagtagaattccttcaagaaaaagaaatctttaaggagttcatctatcgcattaataca
cttggatggatcagccgtactcagtttgaagagacttgggctactttgcttggtgtgctc
gtaactcaacctattgtaatggaccaagaggagaaccaacaagaggaagatacagagagg
acccaaattaatgttcttgcagtacaagccataacttccttggtgctgagtgcaatgaca
atacctgttgcaggcaatccagcagttagctgtttggaacagcagccccgcaacaaagct
ttaaaagctctggacacaaggtttgggaggaagctgagtgttatcaggggaattgttgaa
cgggaaatccaagcaatggtatctaagagagataatattgcaactcatcacttataccaa
gcttgggatcctgttccatcactttctcctgctactacaggtgctcttatcagccatgaa
aagctcttgctgcagatcaatactgaacgagaaataggagatatggattataaactggga
caggtctctatacattccatatggttaggaaacaatatcactccactgagagaagaggag
tggggtgaagatgaagaagatgagaatgacatacctgctccttcctcaccaccaacctct
cctattaacacaaggaagcaccgggctggtgtagatatccattcttgttctcagttcttg
cttgaactgtacagtcagtggatattgccttcaaaccccagcaagaggacaccagtcatc
ttgattagtgaagtagtgcgatcacttctggcagtatcagacttatttacagaaaggaat
cagtttgagatgatgtatacaacactgacagaactgcggaaggtacatccatcagaagat
gagattcttgtacagtatttgataccagccacttgtaaagctgctgctgttcttggaatg
gataaagctgtggctgaaccagtaagtcggctgctggaatcaaccctaagaagcactcat
atgccaagtcggattggagctctgcatggaattctttatatccttgagtgtgacctgctt
gatgagacagcaaagcaactcattccaattatcagcgagtatctgctctccaatttgaga
ggagtagcacattgtgtaaacatccataaccaacagcacatcttggtaatgtgtgcagct
gctttctatttgatcgagaactacccacttgatgtagggcctgaattctctgcaggaatt
atacagatgtgtggagtcatggtgtctggaagtgatgagtcaacaccgtccattatttat
cattgtgtcctgagaggattagaaagactccttctttcagagcaactttctaggctggat
agtgaatcactagttaaactgagtgtggacagagtgaatgtacagagcccccacagagca
atggcagcacttggactgatgctgacttgcatgtatacaggaaaggaaaaaatcagcccc
agtcgtaacacagatgcaaatccctctgctccagacagtgaatctgtgatcgtagctatg
gaacgagtttctgtcctttttgataggattaggaagggatttccttttgaagccagagtg
gtggctcgaatccttccacagttccttgatgattttttccccccacaagacgtaatgaat
aaagttattggagaatttctatccaatcagcaaccttaccctcagttcatggcaacagta
gtttataaggtattccagacactacatagcactggacagtcctcaatggtccgtgactgg
gtgatgctgtctctctctaatttcacacaaagaacacctgtggcaatggcaatgtggagt
ctttcctgtttttttgtcagtgcttccaccagtcaatggatttcagcaattcttccacat
attatcagccgaatgggaaaatctgagcaagtggatgtgaacatcttctgtttggtggcc
atagacttttaccgacatcaaatagatgaagaattagatcggagggcctttcagtcagtg
tttgaagtggtagcatctccaggaaccccttatcatcgactactaacttgtttgcagaat
gtccacaaggtcacagcatgttga
DBGET
integrated database retrieval system
