Chaetura pelagica (chimney swift): 104391090
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Entry
104391090 CDS
T08631
Symbol
MSH4
Name
(RefSeq) mutS protein homolog 4
KO
K08740
DNA mismatch repair protein MSH4
Organism
cpea
Chaetura pelagica (chimney swift)
Brite
KEGG Orthology (KO) [BR:
cpea00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cpea03036
]
104391090 (MSH4)
Chromosome and associated proteins [BR:
cpea03036
]
Eukaryotic type
Meiosis-specific proteins
Others
104391090 (MSH4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_II
MutS_IV
AAA_14
AAA_22
nSTAND3
ATPase_2
AAA_28
AAA_30
AAA_23
AAA_18
AAA_29
Motif
Other DBs
NCBI-GeneID:
104391090
NCBI-ProteinID:
XP_009998617
LinkDB
All DBs
Position
Unknown
AA seq
850 aa
AA seq
DB search
MAWESYFGDKSSCVENTSALNLTSSSSVRGLSSTGKGKAALPCGRPVFRSHTPLMGYSVT
SSSAVSSHSAASVIVAVVEGRGLARGEVGMASIDLKNPEMILSQFADNTTYAKVITKLKI
LTPLEIVMSNTACDAGSTTKLFSLITEHFKNVTFTTVQRKYFNETKGLEYIEQLCASEFS
TIFMEIQSKYYCLAAAAALLKYVEFIQNSVYAPKSLKVRFQGSEKTAMIDSSSAQNLELV
INNRDSRNSHTLFGVLNYTKTPGGSRRLRSNILEPLVDAETINMRLDCVQELLQDEELFF
GLQAVISKFLDTEQLLSVLVQIPKQDTVKTAESKITNLIYLKHTLELVEPLKAALRSCNT
PLLKAYYSSLEDTRFRIILEKITAVINDDTRYTKGCLSMRTQKCYAVKPNINEFLDIARR
TYTEIVDDIAGMITQLAEKYNLPMKTSFSSARGFFIQMNVDCSTLPNGQLPSEFTKITKM
KNTYSFTSADLIKMNERCQESLREIYHMTYLIVCKLLNEIYEHINCLYKLSDIVSMLDML
LSFAHACTLSDYVRPEFTDTLAIKQGWHPILEKIAVEKPVSNNTYLTEGNNFVIITGPNM
SGKSTYLKQIALCQIMAQIGSYVPAEYCSFRIAEQIFTRIGMDDDIETNASTFMKEMKEI
TYIIQNANDKSLIIIDELGRGTSAEEGIGICYAACEYLLNLKAFTLFATHFLELCHIDAL
YPNVENCHFEVQHVRSSAGNKEKIAYTYTLSKGYTEEKNYGLKAAEVSSLPSSVILDAKE
ITNHIAKQILHRQKSTPEMMKQRAVYHLAMRLVQTARNSRLDPDSLRVYLKGLKKKYEAS
SPASGQNDVQ
NT seq
2552 nt
NT seq
+upstream
nt +downstream
nt
atggcttgggagtcgtattttggggacaaaagttcttgtgtagaaaacaccagtgctttg
aatctcacaagttcttcctctgtgcgaggcctgagcagcacgggtaaaggaaaagcagcc
cttccttgtggcagacctgttttcagaagccataccccacttatggggtattcagtgacc
tcctcgtctgcagtgtcttctcattctgctgcctccgtcattgtagctgtggtagaaggg
agaggccttgccaggggcgaagtaggaatggccagtattgacttaaaaaatcctgagatg
atactatcacaatttgcagacaatacaacttatgccaaggttattactaaactcaagatt
ttaacaccactagaaatagtaatgtcgaacactgcttgtgatgcagggagcacgacaaaa
ttattcagtcttataacagaacactttaagaatgtgacttttacaactgtccaaagaaaa
tacttcaatgaaacaaaaggtttggaatacatagagcaattgtgtgcatctgaatttagc
accattttcatggagattcaatcaaagtactactgtcttgcagctgctgcagctttgcta
aaatacgttgaatttattcaaaattcagtttatgctcctaagtcactcaaggtgcgtttt
caggggagtgagaaaactgctatgatagattcatcatcagcacaaaacctcgagctagtc
attaataacagagattctcggaacagtcacacactttttggtgtcctgaattacactaaa
actccaggaggaagtcgaagacttagatccaatatcctggagccactggttgacgctgaa
acaattaacatgagattggactgtgttcaggaattactccaggatgaggagctctttttt
ggtcttcaagcagttatctcaaaattcctggatacagaacaactactttcagttttggta
caaattccaaagcaggatacagttaaaactgctgaatcaaaaataactaatttaatatac
ctgaaacatactttggaacttgtggagcctctaaaagctgctttaagaagctgcaacacg
ccgctgctgaaggcttattacagttctcttgaagatacaagattcagaattatccttgaa
aagatcacagcggtgattaatgacgatacccggtacacaaaagggtgtctgagtatgagg
acccagaagtgctatgctgttaagccaaacatcaatgaattccttgacattgctcgtaga
acatacacagagattgttgacgacatagcaggtatgataacacaacttgcagaaaagtac
aatctaccaatgaagacaagtttcagctctgctcgtgggttttttatccagatgaatgtt
gattgttcaacattacctaatggccagcttccttcagaatttacaaagatcactaaaatg
aaaaacacatatagcttcacatcagcagatttaataaaaatgaatgaaagatgtcaggag
tccctgagagaaatatatcacatgacctacttaatagtgtgtaaactactgaatgagatc
tatgaacacattaattgcctgtacaagctgtctgacattgtgtcaatgctggatatgctg
ctttcatttgcccatgcctgcactctttctgattatgttcgtccagaatttacagatact
ttagcaatcaagcagggatggcatcccattcttgaaaagatagctgtggaaaaacctgtg
tctaacaacacgtacctaacagagggtaacaattttgttattattacgggaccaaatatg
agtggaaaatcaacatacttaaaacagattgctctctgtcaaattatggcacagattggt
tcttatgtcccagcagagtattgttcttttagaattgcagagcaaatttttaccagaata
ggtatggatgatgatatagaaacaaatgcatcaacattcatgaaggaaatgaaagagata
acatacatcatacaaaatgctaatgacaagtcactcatcatcattgatgagctaggcaga
ggtaccagtgctgaagaaggtattggcatttgttatgctgcctgtgaatatctgttgaat
ttaaaggcgtttacattgtttgctacacatttcctggaactgtgtcatatagatgctttg
tatcccaatgtggaaaattgccattttgaagtgcaacatgtgagaagcagtgctggaaat
aaggagaaaattgcttacacttacacgctctctaaaggatatacagaggaaaagaactat
ggattaaaagctgcagaagtttcctccctgccatcatctgtaattttggatgcaaaggaa
atcacaaatcatattgcaaaacaaattttgcacaggcagaagagcactcctgagatgatg
aagcagagagctgtgtaccatttagccatgaggttggttcagactgccaggaattctcga
ctggatccagacagtttgcgcgtttatttgaaaggtttgaagaaaaagtacgaagccagt
agtcctgcatctggacaaaatgatgtgcaaaa
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