Chaetura pelagica (chimney swift): 104391118
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Entry
104391118 CDS
T08631
Symbol
ERCC6
Name
(RefSeq) DNA excision repair protein ERCC-6
KO
K10841
DNA excision repair protein ERCC-6
Organism
cpea
Chaetura pelagica (chimney swift)
Pathway
cpea03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
cpea00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
104391118 (ERCC6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cpea03036
]
104391118 (ERCC6)
03400 DNA repair and recombination proteins [BR:
cpea03400
]
104391118 (ERCC6)
Chromosome and associated proteins [BR:
cpea03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
104391118 (ERCC6)
DNA repair and recombination proteins [BR:
cpea03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
Other TCR factor
104391118 (ERCC6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
TFIIF_beta
Motif
Other DBs
NCBI-GeneID:
104391118
NCBI-ProteinID:
XP_009998650
LinkDB
All DBs
Position
Unknown
AA seq
1499 aa
AA seq
DB search
MPTDNSHLPDSIQEQDPVTASSNNCQDNAEGLGTEQENGICNSDLGNRVPSSASQSSASM
VVPLEVPRRAQPLLQINRQQIQSVSYSAQAAELKDLGVDVYDQDVLEQGVLQQVDNAINE
ANKATKIADAEKEYPAVLDDLRSCATSLKQINKIIEQLSPQAANNKDINRKLDSVKRQKY
NKEQQLKKIKAKQKRLQAVLGGTEILDKVHEIEFEEDEEPGPSSLGSMLMPVQETEWEEL
IRTGQMTPFGTKIPQKPERNTRRLMLNEESDFEKYLADQAKLSSERKKLSLHKGVKKKAQ
AKNVQCVAPTSTTTEKNGKALSKTDKRLKKHMRRLQKHALQIQSKAKIPKEKKYLETKKF
KCEQEDDSGESEYIPDEELFNPEVADEEEEQASSHAENDSDYELRNLSRKRKHLVKRDFK
EAEDDVDFIPSSEEEEHILGKRKVKRWRDDGDEAYYKQRLRRWQKERLKDKEHQIAEELS
EESDTEFEEGFKVPGFLFKKLFKYQQTGVRWLWELHCQQAGGILGDEMGLGKTIQIIAFL
AGLSYSKIRTRGSNYRYQGLGPTVIVCPATVMHQWVKEFHTWWPPFRVAVLHETGSYTEK
KVKLIHEIASCHGILITSYSYIRLMQDNIHRYDWHYVILDEGHKIRNPNAAVTLACKQFR
TPHRIILSGSPMQNNLKELWSLFDFVFPGKLGTLPVFMEQFSVPITMGGYSNASPVQVKT
AYKCACVLRDTINPYLLRRMKADVKMSLSLPDKNEQVLFCRLTEEQRQVYQDFINSKEVY
QILNGEMQIFSGLVALRKICNHPDLFSGGPRILKGVPDTEVEEVDQFGYWKRSGKMIVVE
SLLKIWHKQGHRVLFFTQSRQMLQILEVFVRDRNYSYLRMDGTTTIASRQPLITRYNEDK
SIFIFLLTTRVGGIGVNLTGADRVIIYDPDWNPSTDTQARERAWRIGQKKQVTVYRLLTA
GTIEEKIYHRQIFKQFLTNRVLKDPKQRRFFKSNDLYELFTLSSPDVSQGTETSAIFAGT
GSDVQVSKHQLKQKLEKPPDNNTSKGDLHLKESSSPMYSKSSNSYSAAYMTDSSSKAIET
SEETEGNLENFGQNTFAKDDNVQADTNIHSLNKSKEESLERADKSVSQTLPDDARSSENA
KCLNTVVAAEVHGAANVNAKGVFSFTCGAAASWEKQADKTEDRQLDSNHYKCTSKTKHSV
NMLSHESHKDKSKKKHHKDARFEGERIPHLVKQKRYRKENNEEKEEDSKKNDDYVLEKLF
KKSGVHSVMKHDAIMEASSADYVLVEAEANRVAQDALRALKVSRQRCLGAASGVPTWTGT
SGLSGAPSAIKSRFGQKRNPMLLSSHSISASPAKKCKDANTIKKENVKKCSSNGHFDGKS
GESSSSALDSSSLLAKMRARNHHVLPQQRANEEDGNHQQAPTPAPGSTEYDELLVDMRNF
IAFQARVDGEASTRELLHEFESKLPAAQSCVFRELLRNVCTFHRNPNGEGIWRLKPEFR
NT seq
4500 nt
NT seq
+upstream
nt +downstream
nt
atgccaacagacaacagccacctgccagacagtatccaagaacaagaccctgttactgct
tcaagcaataattgccaggataatgctgagggattgggaactgagcaagaaaatggcatt
tgtaacagtgacttgggtaacagagttcccagctctgccagccagtcttctgcttccatg
gttgttcctttggaggtgcccagaagagcacagccccttttgcagatcaacaggcagcag
attcagtctgtctcatatagtgcacaggctgctgagctcaaagatttaggagttgatgtc
tatgaccaggatgtattggaacaaggagttcttcagcaagtagataatgcaattaatgaa
gctaataaagcaacaaaaatagctgatgcagagaaagaatatccagcagtactggatgac
ttaagatcatgtgcaacatctctgaaacaaataaataaaattattgagcaactttcacct
caagctgccaacaacaaagatataaacagaaaactagattctgtaaagcggcaaaaatat
aacaaggagcaacagctaaagaagatcaaagcaaaacaaaaacgtcttcaagcagttctt
ggtggaacagaaattcttgataaagtacatgagattgaatttgaggaagatgaagaacct
ggtccatcaagtcttggcagtatgcttatgcctgttcaggaaacagaatgggaagagctt
attcgtacaggccagatgactccatttggaaccaaaatacctcagaagccagagaggaac
acacgacgattaatgctaaatgaagaatctgattttgagaagtacttagcagaccaagct
aagctgtcatctgaaagaaagaagttatctcttcacaaaggagtgaagaagaaagcacaa
gccaaaaatgttcagtgtgtagctcccacatctactacaacggaaaaaaatggtaaagcc
ctatcaaaaacagacaagcgcttaaaaaaacacatgagaagacttcagaaacatgccctt
cagattcaatcaaaggcaaagattccgaaagaaaagaagtatcttgagaccaagaagttc
aagtgtgaacaggaggatgatagtggagagtctgagtacatacctgatgaagagctcttc
aatccagaagtagcggatgaggaggaggagcaggcatcttctcatgctgagaatgattct
gattatgaactcaggaatttgtcaagaaaaagaaaacatttggtgaagagagattttaaa
gaagctgaagatgatgttgacttcattccaagctctgaggaagaagagcatatactgggg
aagcgcaaagtaaagagatggagagatgatggagatgaagcctattataaacagagacta
aggaggtggcaaaaagaacgattgaaggacaaagaacatcaaatagctgaggaactttct
gaagaaagtgacactgaatttgaagaaggtttcaaagtaccaggatttctcttcaaaaag
cttttcaagtaccagcagacaggtgttaggtggctctgggaattgcactgccagcaggca
ggaggaattctgggagatgagatgggattgggcaagaccatccagataattgccttcttg
gcaggtctgagctacagcaagatcaggactcgtggttcaaattacaggtaccagggattg
ggtccaacagtgattgtttgtccagccactgtgatgcatcagtgggtaaaagagttccac
acttggtggcctccgtttagagtcgctgttctccatgaaactggttcttatacggagaag
aaggtgaaactaattcatgaaattgcttcatgccatggaattttaattacgtcttattca
tacattcgactgatgcaggataacatccacagatatgactggcattatgtgattctggat
gagggtcacaaaatccgaaacccaaatgctgcagtcacacttgcatgcaagcagttccgc
acaccccatcgaatcatcctgtctggctcccctatgcaaaataacctgaaggagctctgg
tccctctttgactttgtattcccagggaaactgggaacgctacctgtgttcatggagcaa
ttttctgttccaataaccatgggaggatattccaatgcatctcctgtccaggtaaaaacg
gcatacaaatgtgcctgtgtgttacgggacaccataaatccctacctgctgcgaagaatg
aaggctgatgtgaaaatgagcctttcacttccagataaaaatgaacaggttctcttttgc
cgtttgacagaagagcagcgtcaagtctatcaagatttcatcaactctaaagaagtttac
cagattctcaatggagaaatgcagattttctcaggactggtagctttgaggaagatttgc
aaccaccctgacctcttctctggtggtcccagaatcttgaagggtgtaccagacactgag
gtggaggaagtagatcagtttggatattggaagcgttctggaaaaatgatagtggtagag
tccttactgaaaatatggcacaagcaaggtcacagagtattgttttttactcagtcaaga
cagatgctgcagatacttgaagtctttgtgagagacagaaactattcctacctcaggatg
gatggaaccacaacaatagcttccagacagccccttataacaagatataatgaggacaaa
tccatatttatttttcttctgacaactcgtgttggtggcattggagttaacttgactggt
gctgacagggttattatttatgatcctgactggaatcccagtacagacacacaggctcgg
gaacgtgcttggagaataggccaaaagaagcaggtgactgtgtataggcttctcactgca
ggcactatagaagagaagatataccacagacaaatcttcaagcagtttttaacaaacaga
gtgctgaaagatcctaagcagagacgctttttcaaatccaatgacctttatgaacttttt
actctgagcagcccagatgtgtctcaggggacagaaacaagtgcaatttttgcaggtact
ggttcagatgttcaagtctcaaaacaccagttgaaacagaaactggaaaagccacctgat
aacaacacttctaaaggtgatctccatcttaaagaaagtagctcacctatgtacagcaag
tcatccaattcctactcagctgcctacatgacagattcttcttctaaagcaatagagaca
agtgaggaaaccgaaggaaacttggaaaactttggccaaaatacctttgcaaaagatgat
aatgtacaagctgatactaatatacattcattgaataaaagcaaggaggaaagcttggaa
agagctgacaaatctgtgtcccagacattgccggatgatgcaaggtcttcagagaatgcc
aaatgtctgaacactgtggtagctgctgaagtacatggagcagctaatgtaaatgccaag
ggagtttttagttttacatgtggcgcagctgcctcatgggaaaagcaggctgataaaact
gaagataggcagttagatagtaatcattataaatgtacttcaaaaacaaagcacagcgtg
aatatgctgtcacatgagagccacaaagataagtctaagaagaaacatcacaaagatgcc
aggtttgaaggagagcgcattcctcatctagtgaaacaaaaacgatacagaaaggagaac
aatgaagagaaggaggaagactcaaaaaaaaatgatgattacgtcttggagaaacttttc
aaaaaatcaggagtacacagtgttatgaagcatgatgccattatggaagcttctagcgca
gattatgtgctggtggaagcagaagcaaacagagtggcccaggatgccttaagagcctta
aaagtctcccgacagaggtgtttaggagctgcttctggtgtgccaacctggacaggcacg
agtggtctttcaggtgcaccatcagcaataaagagtcggtttggtcaaaaaagaaacccc
atgctgctttcttcacattccattagtgcatcacctgcaaagaagtgcaaggatgcaaat
acaataaagaaagaaaatgtgaagaagtgtagttccaatgggcactttgatggaaaatct
ggagaatcatcgtccagtgcactagactcttcatctttattagctaagatgagggcaaga
aaccaccatgttttaccacaacagagagcgaatgaggaagatgggaatcatcagcaagca
cccaccccagccccaggttccacagaatacgatgaactgctggtggacatgcgtaacttc
atagccttccaggcccgcgtggacggtgaggccagcactcgggagctgctgcatgaattt
gagtccaaactgcctgcagcgcagtcctgcgtcttcagagaactcctccgcaacgtctgc
accttccataggaacccaaacggtgaaggcatttggagactaaagccggaattccgctga
DBGET
integrated database retrieval system
