Chaetura pelagica (chimney swift): 104391211
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Entry
104391211 CDS
T08631
Symbol
DSCAM
Name
(RefSeq) Down syndrome cell adhesion molecule
KO
K06767
Down syndrome cell adhesion molecule
Organism
cpea
Chaetura pelagica (chimney swift)
Brite
KEGG Orthology (KO) [BR:
cpea00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
cpea04515
]
104391211 (DSCAM)
Cell adhesion molecules [BR:
cpea04515
]
Immunoglobulin superfamily
DSCAM family
104391211 (DSCAM)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
I-set
Ig_3
Ig_2
fn3
ig
Ig_DSCAM-DSCAML_C
V-set
Ig_5
C2-set_2
Pur_ac_phosph_N
Ig_4
C1-set
Sp38
V-set_CD47
Interfer-bind
fn3_2
C2-set_3
ChitinaseA_N
Adeno_E3_CR1
DUF6377
Motif
Other DBs
NCBI-GeneID:
104391211
NCBI-ProteinID:
XP_009998749
LinkDB
All DBs
Position
Unknown
AA seq
2003 aa
AA seq
DB search
MSSLFFFLTVFSEDLHASLYFVNASLQEVVFASTTGTLVPCPAAGIPPVTLRWYLATGEE
IYDVPGIRHVHPNGTLQIFPFPPSSFNNLIHDNTYYCTAENPSGKIRSQDVHIKAVLREP
YTVRVEDQKAMRGNVAVFKCIIPSSVEAYITVVSWEKDTVSLVSGPRFLITSTGALYILD
VQNEDGLYNYRCITRHRYTGETRQSNSARLFVSDPANSAPSILDGFDHRKAMAGQRVELP
CKASGHPAPKYRWLKDNVPWEPDSRFRQTVTGLLIENTRPSDSGNYVCEVWNNYGTAEMI
GRLYVKQPLKATISPRKVKSSVGSQVSLSCSVTGTEDQELSWYHNGEIINHGNNVRITGV
NQENLIMDGMAKSDGGAYQCFVRKDKMSAQDYVQVVLEDGTPKIISAFSEKVVSPGEPVS
LMCNVKGTPLPTITWTLDEDPIVKDSSHRISQIITSEGNVVSYLNVSNTHVRDGGVYRCT
ANNSAGVVLYQARINVRGPASIRPMKNITAIAGRDTYIHCRVIGYPYYSIKWYKNSNLLP
FNHRQVAFENNGTLKLSDVQKEVDEGEYTCNVLVQPQLSTSQSVHVTVKVPPFIQPFEFP
RFSIGQRVFIPCVVVSGDLPITITWQKDGRPIPASLGVTIDNIDFTSSLRISNLSLMHNG
NYTCIARNDAAAVEHQSQLIVRVPPRFVVQPSDQDGIYGKAVILNCSAEGYPVPTIVWKY
SKGAGVPQFQPIALNGRIQLLTNGSLLIKHVLEEDSGYYLCKVSNDVGADVSKSMYLTVK
IPAMITSYPNTTLATQGQKKEMSCTAHGEKPIIVRWEKEDRIINPEMSRYLVSTKEVGDE
VISTLQILPTVREDSGFFSCHAINSYGEDRGIIQLTVQEPPDPPEIEIREVRARSIALRW
TMGFDGNSPITGYDIECKNKSDSWDSVQRTKDVSPQLNQATIIDLHPSSTYNIRMYAKNR
IGKSEASNELTITTDEAAPDGPPQDVQLEPVSSQSIRVTWKAPKKHLQNGIIRGYQIGYR
EYSAGGNFQFNIISIDTTGDNEVYTLNNLKKFTQYGMVVQACNRAGIGPSSQEIITTTLE
DVPSCPPGNVQATATSPETISISWSTLAKETLNGILQGFRVIYWANLLDGELGEIRNVTT
TQPSLELDGLEKYTNYSIQVLAFTRAGDGVRSEQIFTRTKEDVPGPPAGVKAAAASASTV
FVSWLPPLKLNGIIRKYTVFCSHPYPTVISEFEASPDSFSYRIPNLSRNRQYSVWVVAVT
AAGRGNSSEIITVEPLAKAPARILTFSGTVTTPWMKDIVLPCKAVGDPAPTVKWMKDSNG
TPSLVMIDGRRSIFSNGSFVIRTVKAEDSGYYSCVASNNWGSDEIILNLQVQVPPDQPRL
TVSKTTSSSITLSWIPGDNGGSSIRGYILQYSEDNSEQWGSFPISPSERSYRLETLKCGT
WYKFTLTAQNGVGPGRISEIIEAKTLGKEPQFSKEQELFASINTTRVRLNLIGWNDGGCP
ITSFTLEYRPFGTTVWTTAQRTSLSKSYILYDLQEATWYELQMRVCNSAGCAEKQAKFAT
LNYDGSTIPPLIKSVVQSEEGLGTNEGLKMLVTISCILVGVLLLFVMLLIVRRRRREQRL
KRLRDAKSLAEMLMSKNTRTSDTLNKQQQTLRMHIDIPRAQLLIEERDTMETIDDRSTVL
LTDADFGETSKQKSLTVTHTVHYQSVSQATGPLVDVSDARPGTNPTTRRSAKTGPTARNR
YASQWTLNRPHPTISAHTLTTDWRLPTPRPAGSVDKESDSYSVSPSQDTDRARSSMVSTE
SASSTYEELARAYEHAKMEEQLRHAKFTITECFISDTSSEQLTAGTNDYTDSLTSSTPSE
SGICRFTASPPKPQDGGRVMNMAVPKAHRPGDLMHLPPYLRMDFLLNRGVQGTSRDLGLG
QACLEPQKSRTLKRPTVLEPIPMETSSTREVQSWQPGAVATLPQREGAELGQAAKMSSSQ
ESLLDSRGHLKGNNPYAKSYTLV
NT seq
6012 nt
NT seq
+upstream
nt +downstream
nt
atgtcttctcttttttttttccttacagttttcagtgaagatctacacgccagtctatat
tttgtcaatgcatctctgcaagaggtagtgtttgctagcaccacagggaccttggtaccc
tgtccagcagcagggatcccccctgtgacgctcagatggtacctagctacgggcgaggag
atctacgatgtcccagggatccgccacgtccaccccaatggcactctccaaattttccct
ttccctccttcaagctttaataacttaatccatgataacacttactattgcacagctgaa
aatccttcagggaaaatcagaagtcaggatgttcacattaaggccgttttacgggaaccc
tatactgtccgtgtggaggaccagaaagccatgagaggcaatgtagcagtgttcaagtgc
attatcccctcctctgtggaggcatacatcactgttgtctcatgggagaaagacacagtc
tcgcttgtctcaggacctagatttctcatcacatccacgggagccttgtatattttagat
gtacagaatgaagatgggctgtacaactaccgatgtatcacaaggcacagatacactgga
gaaactcgacaaagcaacagtgcaagactttttgtatcagatccagcaaattcagctcca
tctattctagatgggtttgaccaccgtaaagccatggcaggacagcgagtggagctgcct
tgcaaagcatcagggcaccccgcaccaaagtatcgttggctgaaggacaatgttccctgg
gagcctgacagcaggtttcggcagacagttacgggtctgctgatcgagaacacacgtccc
tcagactcaggcaactatgtctgcgaggtgtggaacaactatgggactgccgagatgata
gggcgactgtatgtgaaacaaccactaaaagccacgattagcccacggaaagtaaaaagc
agtgttggtagtcaagtgtccttgtcctgcagtgtaacaggaactgaggaccaggagctc
tcctggtatcataatggtgaaatcatcaaccatggtaacaacgtccggatcactggtgtc
aaccaggagaaccttattatggatggcatggccaagagtgatggtggagcttaccagtgc
tttgtgcgcaaggacaagatgtctgctcaagactatgttcaagtggtactagaagatgga
actcccaaaataatttctgccttcagtgagaaagtggtgagtccgggagagccagtctcc
cttatgtgcaacgtgaaggggactcctttgcctaccatcacttggacgctggatgaagat
cccattgtgaaggacagcagtcatcgtatcagccagattatcacctctgaaggcaacgtg
gtcagctacctgaatgtctctaacactcacgtccgagatggtggagtttatcgctgcact
gccaacaactctgctggagtcgtcctgtaccaggctcgaataaacgtaagagggccagca
agcattcgaccgatgaagaacatcacagcaatagctggacgggacacctacatccactgc
cgtgtgattggctacccgtattattccatcaaatggtacaagaactctaacctgctaccg
tttaaccatcgccaagtggcgtttgagaacaacgggacgctgaagctttcagatgtgcag
aaagaagtagatgagggcgaatacacatgcaatgtccttgttcaaccccagctgtccacc
agccagagtgtgcatgtgacagtaaaagttccaccttttattcagccttttgagttcccg
cggttctccatcgggcagcgggtcttcattccctgcgtggtagtctctggggacttgccc
atcaccatcacctggcagaaggatggcaggccgatcccagccagccttggggtgacgatt
gacaacatcgactttaccagctccttaaggatttctaatctttcgctgatgcacaatgga
aattatacctgtatagctagaaatgatgcagcagctgtggagcaccaaagccaattaatt
gtgagagtgcccccaaggtttgtggttcagcccagtgaccaggatggcatctatggaaaa
gctgtaattctcaactgctctgcagagggttatcctgttcctaccattgtctggaaatac
tcaaaaggtgccggtgttcctcagttccagccgattgcattgaatggtcgtatccagctt
ctcacaaatggctccttgctgattaaacatgtgctggaagaagacagtggatactacctc
tgcaaggtcagcaatgatgtgggagcagacgtcagcaagtccatgtacctcactgttaaa
attccagctatgataacatcctatccaaacaccaccttggcaacacaaggtcagaagaag
gaaatgagctgcacagcacatggagagaaacccatcatagtccgctgggaaaaagaagac
cgaatcattaaccctgaaatgtcccgttaccttgtttccaccaaggaagttggagatgaa
gtgatctctactctgcagattttgccaactgtgcgtgaagattctggcttcttttcctgc
catgccatcaattcgtatggggaggatcgtggaataattcagctcactgtgcaagagccc
cccgaccctcctgaaatagaaatccgagaggtgagagcacgcagtattgccctcaggtgg
accatgggatttgatggaaatagccccatcaccggctatgatatcgagtgcaagaacaag
tcagactcttgggactctgttcagagaaccaaagatgtttcccctcagctaaatcaagcc
acgatcattgacctccacccttcctcaacttacaacattcgcatgtatgccaagaatcgc
attgggaagagtgaggccagcaatgagctcaccattactactgatgaagcagctcctgat
ggtccacctcaggatgtccaacttgagcctgtatcttcacaaagcattagggtcacctgg
aaggctccaaagaagcacttgcaaaatggaattattcgtggataccagataggttatcgg
gagtacagtgcagggggcaatttccagttcaacatcatcagtattgataccacaggagac
aatgaagtttatacactgaataacctgaaaaaattcacccagtatggcatggtagtccag
gcttgtaaccgggctggaataggaccttcttctcaggaaatcatcaccactactcttgag
gatgtgcccagttgccctccagggaatgtgcaagccactgccacatcaccagaaaccatc
tctatttcctggtcaaccttggcaaaagaaaccctgaatgggattctgcaaggattcagg
gttatctactgggcaaatctcttggacggagagctaggagagataaggaatgtcactact
acgcagccatcactagagcttgatggcctggaaaaatacaccaactacagcattcaggtg
ttggcttttacacgagctggagatggagtgagaagcgaacagattttcacccgcactaaa
gaagatgttccaggtcctcctgctggtgttaaagcagctgcagcttcagcctccaccgtc
tttgtgtcctggctccctcccctcaagctgaacggcatcattcggaaatacactgtcttc
tgctcacacccctatcccacagtaatcagcgagtttgaagcctctcctgactcattttcc
tacagaatccccaacctgagccggaatcgccagtacagtgtctgggtggtagcagtgact
gctgctggaagaggcaacagcagtgagattatcactgtggaaccactagctaaagctcct
gccagaattttgactttcagtggcacagtgacaactccctggatgaaagacattgtcctc
ccttgcaaagctgtgggagacccagctccgacagtcaaatggatgaaggatagtaacggg
acacccagtctagtgatgattgatgggcgaagaagcatctttagcaacggcagctttgtc
atccgtactgtgaaagcagaggactctggatactacagttgtgtggccagtaataactgg
ggatcagatgaaataattttgaatttgcaggtacaagttccaccagaccagccaagactc
actgtatccaaaactacatcttcctctattactctttcctggatacctggagacaatggt
ggcagttctatccgaggttatattttgcagtactcagaagataacagtgagcagtggggt
agttttcccattagccctagtgagaggtcctaccgtttagaaacactgaaatgtggcacc
tggtacaagtttactctgactgctcagaatggagtggggccaggacgcatcagcgagatc
attgaggccaaaacacttggaaaagagccacagttttcaaaggaacaagagctctttgct
agcatcaacaccacgagagtgaggctgaacctgataggctggaatgacggcggctgcccc
atcacctccttcaccctggagtaccggccctttgggacaacagtctggacgaccgctcag
cggacatccctgtcaaagtcctacatactgtatgacctccaggaggcaacctggtatgag
ctgcaaatgagagtgtgcaacagtgctggctgtgcagagaaacaagccaaatttgcaact
ctcaattatgatggcagtacaatccctccactcattaagtcagttgtgcaaagtgaagaa
gggctgggaaccaacgaagggctaaagatgctggtgaccatttcctgtatcttggttggg
gtcctgctgctttttgtgatgctgctgatcgtgcggaggaggaggagagagcagagactg
aagaggctgcgagatgcgaagagtttggctgaaatgcttatgagcaagaacaccaggaca
tcagatacactcaataagcagcagcaaacactgaggatgcacatagacattcccagagca
cagcttctgattgaagagagggacacgatggagaccattgatgacagatctacagttctg
ctcactgatgctgactttggagagacgtctaaacagaagtcactgactgtcacccacacg
gtacattaccagtctgtatcacaagctacaggaccactggtggatgtttctgatgcacgg
ccaggaacaaatcctaccacaaggaggagtgccaaaaccggacccacagcgcgcaaccgc
tatgctagtcagtggaccctcaacagacctcaccccaccatatcagctcataccctcacc
acagactggaggctgcccacccccaggccagcaggttcagtggacaaggagagtgacagc
tacagcgtcagcccctcacaggacacagatcgagcaagaagcagcatggtctccacagaa
agtgcctcctcaacatacgaagagctagcgagagcgtacgagcatgcaaaaatggaagag
cagctgagacatgccaagttcaccatcacagaatgcttcatatcagacacatcgtcggag
cagctcacggcagggactaacgactacacagacagcctgacctcaagcacgccatcggag
tcggggatttgcaggttcaccgcctcgccccccaagcctcaggatggaggacgagtgatg
aacatggcagttccaaaggcacatcggccaggtgatctcatgcatttgccaccctacctt
aggatggactttttattgaaccgtggtgtgcagggcacgagcagagacctgggtttggga
caagcctgcttggagccgcagaaaagccgaaccttgaagcgcccgactgtcctggagccc
atacccatggagacatcctccacgagagaagtacagtcatggcaacctggtgctgtggca
acgttacctcagcgagaaggagctgagctaggacaggcagcaaaaatgagcagctcccaa
gaatccctgctggactcccggggccacttgaaaggaaacaatccctacgcaaaatcttac
accctggtataa
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integrated database retrieval system
