Chaetura pelagica (chimney swift): 104391253
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Entry
104391253 CDS
T08631
Symbol
CASP8AP2
Name
(RefSeq) LOW QUALITY PROTEIN: CASP8-associated protein 2
KO
K25593
CASP8-associated protein 2
Organism
cpea
Chaetura pelagica (chimney swift)
Brite
KEGG Orthology (KO) [BR:
cpea00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cpea03019
]
104391253 (CASP8AP2)
Messenger RNA biogenesis [BR:
cpea03019
]
Eukaryotic type
mRNA processing factors
3' end processing
U7-dependent histone pre-mRNA processing factors
104391253 (CASP8AP2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Myb_DNA-binding_7
INO80F
Tachystatin_A
Motif
Other DBs
NCBI-GeneID:
104391253
NCBI-ProteinID:
XP_009998799
LinkDB
All DBs
Position
Unknown
AA seq
2009 aa
AA seq
DB search
MATNKDGLGLFDVSYGDGASPFKEGDESSVDIYDGLDNELTVPENSAPNSTPAENSLNLF
DEILIEEGTAKEASYNELQTEYGKCQQQIKELMKKFKEIQAQNVILQNENLALKKNISAL
IKTARVEINRKDEEISNLHQRLSEFPSHRSSFTRTYLPGSTNGRCSEMCKTKDSNFRSSD
SGDSIKMEHRMKNECSKDTYHSHSSHCTDSGKSSSEKRNTPNLPTCPPEELCNGGPQTCL
PNYDHSSNKDNRKERKEIKSNEQYSRGNDNKYKREVHQSTGNNVTTCSNRDGEEGNSDPQ
QKLKTPSEKASKKELQEKSQSIRHKCSPSAERRAERSVSSWEKQTAGKDRFQTKGELYAD
ERSQNVLKKDDKMHDKDEKNAGQKNKANEKLQEQPRRSGRRSSPHSKNEHSKSLHESREC
RLEESRKGKDINCKRDRGTNDHTSREGRTSPSNSSSREHKYARLKENSSRYEWETAHSKS
ERHRTEEKRKRENQDDNKHFRNERKVAKEISHQSAKESKRDKDVTKSEKKKFRAADGLKV
PKTKDDHVGTKSKDLKLSFMEKLNLTLSPAKKQCPTDRLITPSQKATDEGSTELTLQAEL
LDSAQPVNCGLTEQTSSMLQVLDSAAQSSMAPALPISASCENEALKVAAADPAEPEALSA
VTTDELSSETSPEADVSQVQLQASPEAAEILVPDEVQAETLSETLSEAAESGDLVESEVS
ATAVAETDPGLPESLPLEVTGSVPECENLLATVGVTQDVPAAEVAQSEPVSESKGAIPES
AEDKKEEDKVWPAADTGNSADQRDSQNLVSDDSEAKSSGALESCDVADYVSEKKPDCLME
VVKDSGHLASENVAFPVEEKNNCKINMSTSQSLDKTMLTEKYEPLVDQNACDLEPDLTEI
STTSSLSGEMCPRTKERETNQVTVDDDSSILSIDLNHLRHIPKAISPLNSPMRPLAKALK
MEGPCKGLVKSYNKDLNPESTVVVCPSKSLSKEVNKENQNPVSMSDERLEMESQLSISSD
EIEEGEIISSDEEKSKPERGSESTKMSGPKTSPETRNLIRSPQNQKSKTVHCKEDNGKFV
SVKVSTQKNRERHKNQTLRSSKDMKKNKTVSIASLEKIVHVIVEPSNVQEVMQMLRAIRK
QMRKNYMKFKVHFPVQHFHRIIESGIKNFTSLIKYLNFSKMSTLDETLKLSICDIIESKL
KQVKKNAIVDRLFEQQVSDMKKQLWKFVDEQLDYLFEKIRRMIIKLCDVGSMGNDRDEGK
FKRAGKQKHKISHKNDLQRSRKKSLKATSQKPEEYILSKQVVDYQRHKGHHEKNKTDAPK
PALTKCLNSIDNTRNSQTKVHLSKKNNLQGTITPLKGVKYEKEGFQLSREANKSDFSYDL
LTEQQASSLTFNLVSDAQMGEIFKSLLQGSDLLEKNGGNIDRNEWEFRTPEKQFLDSHKN
RSHAAELMQEIAAKEACVEPRAVEDMNWPLVSPVRAPSLASRLQMSVDPDVLDESCMFDV
PTNAASGKEDESSLQKTKSSVSSILLEDLAVSLTIPSPLKSDAHLSFLKPENNSSSAPEG
VLSAHYSEDALLEEEDATEQDIHLALESDNSSSKSSCSSSWTSRPVVPGFQCRPSLPMQA
VIMEKSNDHFIVKIRRAVPSTSPASDQVASGKXXXXXKEKGPSSTKMEKVEMRSGEKERS
SQRVTAATVQETVKSDGVKANQLPRVITGQDQNLALPQPLNESDNSIGKEEATGLLGPCR
KSSTIESHDTESPVEGSEQSQAHKLKVSENINEMDVRSQDSFPAGCSIESYIDLTDDVVS
ETSCCVVESTAGNRTQDISTGNSEMSDRKEELKECDDVTEELSSGMVAGGCTLEAKSTSN
TDVGCHISIDDKTSKKRKKEALRENSNSKRQRTEDERSDASDAKSEEVNSSPEKCSSKKN
ELQQNKDSSPLASTASSPSLYAKNIVKKKGEVVVSWTRNDDREILLECQRKGPSSKTFVS
LATRLNKSPNRVLERFKQLMKLFKKSKCK
NT seq
6030 nt
NT seq
+upstream
nt +downstream
nt
atggcaacaaataaggatggactgggactgtttgacgtctcttatggtgatggagcttct
cccttcaaggaaggtgatgagagctcagtggacatttatgatggcttggacaatgaattg
acagttcctgaaaattctgctccaaattctacaccagctgaaaacagcttaaatttgttt
gatgagatattaattgaagaagggactgcaaaggaagcatcctacaacgagttgcagaca
gagtatggaaaatgtcagcagcaaattaaagagttgatgaagaagtttaaggaaatacag
gcacagaatgtcattctgcagaatgaaaatctagctctcaaaaagaatatttcagcactt
atcaaaacagcaagagtggaaattaaccgtaaggatgaagaaatcagtaatctccatcaa
aggctatcagaatttcccagtcatcgaagtagcttcaccagaacttaccttccaggatca
actaatggaaggtgctctgagatgtgtaagacaaaagattccaatttcagatcttctgat
tcaggtgacagtataaagatggagcacagaatgaaaaatgagtgttcaaaagatacatac
cacagtcactcatctcactgtacggacagtgggaagtctagctctgaaaaaagaaacact
ccaaatttacccacatgccctcctgaagagctctgcaatggtggtcctcaaacatgtcta
cccaactatgaccacagttccaacaaggacaacagaaaggaaagaaaagaaattaaaagt
aatgaacaatatagtaggggaaatgacaacaagtacaaaagagaagtacatcagagcact
ggaaacaatgtaactacctgtagcaaccgtgatggtgaagaggggaattcagatcctcag
caaaagctgaaaaccccttcagagaaagctagtaaaaaggagctgcaagaaaaaagtcag
agcataagacacaaatgcagtccaagtgcagaaagaagagcagaaaggagtgtttcttcc
tgggagaaacaaactgctggtaaagacagatttcagacaaagggcgaattgtatgctgat
gagaggtcccaaaatgtattaaaaaaagatgataaaatgcatgataaagatgaaaaaaat
gcaggccaaaaaaataaagcaaatgaaaagctacaagagcaaccgaggaggtctggtaga
aggagtagtccacactcaaagaatgaacattcaaagagtcttcacgaatcacgtgaatgt
cgtttggaagagtctagaaaaggaaaagacatcaactgcaagagggacaggggaacaaat
gatcatacttctcgagaaggaaggacttcaccttctaattccagcagcagagagcataaa
tatgcacgcttgaaggaaaatagtagtaggtatgagtgggaaacagcacattccaaatca
gaaagacacagaacagaagagaaaaggaaaagagagaatcaggatgacaataaacatttt
agaaatgaaagaaaagttgcaaaagagatttctcaccaatctgcaaaagaatccaagaga
gataaggatgttacaaaaagtgagaaaaagaagttcagagcagcagatgggttgaaagtt
cccaaaactaaagacgatcacgttgggacaaaaagcaaagacttaaaacttagctttatg
gaaaagctaaatttaactctttctcctgctaagaaacaatgtccaacagatagacttata
acaccttcccagaaggccactgatgagggaagtacagagcttacactgcaggcagaactg
ttagattctgcccagcctgttaactgtggtctcacagagcaaactagttcaatgctgcaa
gttctggacagtgcagctcaaagcagcatggcaccagcactgcccatttcagccagttgt
gaaaatgaagccttgaaagtagcagcagcagatccagcagagcctgaagcattgtcagca
gtgacaactgatgaactgagctcagaaacttcaccagaggcagacgtgagccaggtacag
ctccaggcctcaccagaagcagcagagatactggttcctgatgaggtgcaggctgagaca
ttgtctgaaacattgtcagaagcagcagagagtggtgatctggttgaatcggaagtctca
gcaacagcagtggcagagacagatccaggtctcccagaatctttgcctctggaggtgaca
gggagtgtgccagagtgtgaaaacttgctggcgacagtgggtgtgacacaggatgtacca
gcagcagaagtggcacaatctgaacctgtcagtgaaagtaagggagccattccagagtca
gcagaagacaagaaagaggaagataaagtgtggccagctgctgatacaggaaactcagca
gaccagcgtgattctcaaaaccttgtctcagatgactcggaagccaaaagttctggtgcc
ctggagtcctgtgatgttgcagattatgttagtgaaaaaaaaccagactgtttaatggaa
gtggtgaaggacagtggtcacttggcttcagaaaatgttgcatttcctgtggaggaaaag
aataactgcaaaattaatatgagtacatctcagtcacttgacaaaactatgttaactgag
aagtatgaaccattagttgaccagaatgcttgtgatctggagccagacctaactgaaatc
agtactacgtcatctcttagtggtgagatgtgtccaagaactaaagagagagaaactaac
caagttactgttgatgatgacagctcaatactgagcattgatctcaatcacttgaggcac
attcccaaggcgatcagtccactgaacagtccaatgcgccctttggctaaagcacttaag
atggaaggtccctgcaaaggtcttgtgaagagttataataaagatttaaatcctgaaagt
acagttgtcgtctgtccctcaaagagtttgtcaaaggaagtaaacaaagaaaatcaaaat
ccagttagcatgtctgatgaacgcttagagatggagtcccagctgagtatctcttcagat
gaaatagaagaaggagaaatcataagtagtgatgaagaaaaatctaagccagaaagaggg
tctgaaagtacaaaaatgtcaggaccaaaaacttctcctgagacacggaatttgatccgt
agtccgcagaatcagaagagcaaaaccgtgcattgcaaggaggataatggaaaatttgtt
tctgtgaaagtaagtacacagaagaacagagagaggcataaaaatcagactttgagatca
tctaaggatatgaagaaaaataaaactgtgagcattgctagtcttgaaaaaatagttcat
gttattgtggaaccttcaaatgtacaagaagtcatgcagatgctaagagctatacgaaaa
cagatgaggaaaaattacatgaagttcaaggtacacttcccagttcagcattttcacaga
attatagaatctggtatcaaaaattttacatcgttaataaaatacttgaatttttccaag
atgtctacattagatgagacattaaaattgagtatctgtgatattatagagtccaaactt
aagcaagttaaaaagaatgcaatagtggaccgtctgtttgagcaacaagtgtctgatatg
aaaaaacagttatggaaatttgtagatgaacagcttgattacttgtttgagaagataagg
agaatgataataaaactgtgtgatgtgggaagtatgggaaatgatagggacgaagggaag
tttaaaagagcaggaaagcaaaaacacaagatcagtcataaaaatgatttgcaaagatct
agaaaaaagtccctgaaagccacatctcaaaagcctgaagaatatatcctttcaaagcaa
gttgtggattatcaacgacataagggtcaccatgagaaaaataaaacagatgcaccaaaa
cctgccttgacaaaatgtcttaactccattgataacacaagaaattcccaaaccaaagtt
cacctctccaaaaagaataatttgcaaggcactatcactccattgaagggtgtaaaatat
gaaaaggaaggattccagctgtccagggaagctaacaagtctgatttcagttatgacctt
ctcacagaacagcaagcatccagtcttacctttaatcttgtaagtgatgctcaaatgggt
gagattttcaaaagcttgttgcaaggttctgatctcttggaaaaaaatggtggcaatatt
gacagaaatgagtgggaatttaggactccagaaaaacagtttttagacagtcataaaaac
agaagccatgctgctgaactgatgcaagagattgctgcaaaagaggcttgtgttgaacct
cgagcagtagaagacatgaactggccacttgtttcacctgtaagagctccctctttagca
tctcggcttcagatgtctgttgatccagatgtgctagatgaaagctgtatgtttgatgtt
cctacaaatgcagcttcaggcaaagaagatgaaagcagtttacaaaagactaaatcttct
gtgtcttctatcctccttgaagatttggctgtttccttaactattccatcacctttgaaa
tccgatgctcacctcagctttctaaaacctgagaataattctagctcagctcctgagggc
gttctcagcgcacattacagtgaagatgcacttctggaagaggaggatgccactgagcaa
gacattcacttggctttagaatctgataactcaagcagcaaatcaagttgttcttcatca
tggacaagtcggcctgttgttcctggttttcagtgtcgccccagcctaccaatgcaagca
gtaatcatggagaaatccaatgatcattttattgtaaagattaggcgtgcagtgccatct
acctcaccagcatctgatcaggtggcttcagggaaagnnnnnnnnnnnngaaaagagaaa
ggaccatcctcaaccaagatggaaaaagtagaaatgagaagtggggaaaaagaaaggagc
agtcagcgtgtcacagcagccactgtgcaagaaactgtcaaatcagatggggttaaggca
aatcagttgcctcgtgtcatcactgggcaagatcaaaatcttgccttacctcagcctcta
aatgaatcagacaatagtattggaaaggaagaagctactgggttgcttggaccctgtaga
aaatcctctaccatagaaagccacgacacagaaagcccagttgaaggctctgagcaatct
caggcacacaaattgaaagtatctgaaaacataaatgaaatggatgttagatctcaagat
tcttttcccgctggatgcagtatagagtcatacatagacttaacagatgatgttgtcagt
gaaacttcatgttgtgtagtggaatccactgcaggtaacaggactcaggacatttctaca
gggaactcagaaatgagtgatagaaaggaagaactgaaagagtgcgatgatgtgacagaa
gagctttccagtgggatggtagcaggtggatgtactcttgaagcaaaatccacttcaaat
actgatgtggggtgccacataagtatagatgataaaactagtaaaaaaaggaaaaaggaa
gctctcagagagaattccaactcaaaaaggcaacgaactgaagatgaacggagcgatgca
agtgatgcaaagtctgaagaggtaaattcatcacctgaaaaatgttccagtaagaagaat
gagttgcagcagaacaaagactcttctcctttggcttcaactgcatcatcacctagtctg
tatgccaaaaacattgttaaaaagaaaggagaagtagtagtttcctggacaagaaatgat
gaccgagaaattttactggaatgccagagaaaaggaccatcaagcaaaacctttgtttcc
ttagccactaggctgaacaaaagcccaaatcgagttttagaaagattcaagcaattaatg
aagctgttcaagaaatcaaagtgcaagtaa
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