Chaetura pelagica (chimney swift): 104391374
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Entry
104391374 CDS
T08631
Symbol
RIC1
Name
(RefSeq) protein RIC1 homolog isoform X1
KO
K20476
RAB6A-GEF complex partner protein 1
Organism
cpea
Chaetura pelagica (chimney swift)
Brite
KEGG Orthology (KO) [BR:
cpea00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cpea04131
]
104391374 (RIC1)
Membrane trafficking [BR:
cpea04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Rab associated proteins
104391374 (RIC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RIC1
PEP5_VPS11_N
Motif
Other DBs
NCBI-GeneID:
104391374
NCBI-ProteinID:
XP_009998943
LinkDB
All DBs
Position
Unknown
AA seq
1418 aa
AA seq
DB search
MYFLSGWPRRLLCPLESMEQPLYIQTDPQRAFFAVLSRSQLSIWYCRPSVLIVSYKELSK
AASQFGPYKQAEWRPDSTMIAVSTANGYILFFEVPPARDKYLYEPMYPKGSPHLKGTPHY
KEEQCAPSLNLEMKKVLDLQASITSLQSMLEDLLVATADGFLHLVHWDGMTNGRKAINLC
TVPFSVDLQSSRAGSFLGFEDVYIRDMEYCATLDGFAVVFNDGRVGFITPMSSRFAAEQL
HGVWAQDVIDGTCVAVNNKYRLMAFGCANGSVQVYTIDTTTGAMQFSHKLELTPKQYPDI
WNKTGPVKLIRWSPDSCVVMVTWECGGLSLWSVFGAQLICTLGGDFAYQSDGAKKDPLKI
SSMTWGSEGYHLWVIDGSSSNMKPERDGNNEARQFGILQFHFIKSALTVNPCMSNQEQVL
LQGEDRLYLNCGDATQAQSPRNTSVHSEHKPARXXXPFSDGSLDSQGLSTLLGHRHWHVV
QIHSTYLESNWPIRFSAIDKLGQNVAVVGKFGFAHYSLLTKKWKLFGNITQEQNMMVTGG
LAWWNDFIVLACYNLNDHQEELRIYLRTSNLDNAFAHITKVQADTLLLSVFRDIVILFRA
DCSICLYSIERRPEGLNPTASIQVLQEVSMSRYIPHPFLVVSVTLTSVRTETGITLKMPQ
QACEAESIMLNLAGQLIMLQRDRSGPQIRDKDSNPNQRKHLPFCAPVVLAQSVENVWTTC
RINKQKRHLLEALWLSCGGAEMKVWLPLFPRDHRKPHSFLSRRIMLPFHINIYPLAVLFE
DALVLGAVNDTVLYDCLYTQTSAREHLEVLFPFSIVERTSQIYLHHILRQLLVRNLGEQA
LLLAHSCATLPYFPHVLELMLHEVLEEEATSREPIPDPLLPTVAKFITEFPLFLQTVVHC
ARKTEYALWNYLFAAVGNPKDLFEECLMAQDLDTAASYLIILQNMEVPAVSRQHATLLFN
TALEQGKWDLCRHMIRFLKAIGSGETETPPATPTTQEPSSSSGFEFFRHRSISLSQSAEN
LHGKFSLPKTLSMPSGPSGKRWSKDSDCAENMYIDMMLWRHARRLLEEIKLKDLGCFAAQ
LGFELIGWLCKERARAARVDDFVFALKKLHKDFLWPFPVIPASSINSPFKNGKYKTAVGE
QLLKSRSADTFVNMEMDTGVSNTPRSRSWLGTVSSSQREIDTVSSHGPHMQDAFLSPLLS
KGDECSIGSATDLTETSSMVDGDWTMVDENFSSLSLTQSELEHISLELASKGPHKSQVQL
RYLLHIFMEAGCLDWCIIIGLILRESSVINQVFSIMQSSDIDREICQNIKTGLYAVDRWA
STDCPGYKPFLNIIKPQIQKLSEIAEEQVQPEAFQPVNPSKVAEQVNPRAEESRTLSSHG
TNPQSDAGNSSASRHEEDKSKTEDADSFQEGSYDCIVS
NT seq
4257 nt
NT seq
+upstream
nt +downstream
nt
atgtatttcctcagcggctggccccggaggctgctgtgtcctctggaatccatggagcag
cctctgtacatccagacggatccccagagagctttcttcgccgtgttgtcccggtctcag
ctcagcatctggtactgtaggcccagtgtattaatagtaagctacaaggaactatcaaaa
gcagcttctcagtttggaccttataaacaagcagaatggcggcctgatagcaccatgata
gctgtttcaactgcaaatggatacatcttattttttgaagtaccgccagcaagagacaag
tacctttatgagccaatgtatcccaaaggaagtccacatctgaagggaaccccacattat
aaggaagaacaatgtgccccttcattaaatctagaaatgaagaaagtgctggacttgcaa
gcctctatcacaagtttgcagtccatgttagaagatctgcttgttgcaactgctgatggg
tttctccatcttgttcactgggatggtatgaccaatggaaggaaagccatcaacctatgt
acagttccattttctgtggacctgcagtcttctcgagcaggttcatttttgggctttgaa
gatgtttacatcagagatatggaatactgtgccacacttgatggttttgctgttgttttt
aatgatggcagagttggtttcattacaccaatgtcaagtagattcgctgctgagcagctc
catggtgtttgggcacaagatgtgattgatggaacttgtgtggcagtaaataacaaatac
aggctaatggcatttggatgtgccaatggctctgttcaggtttatacgatagataccacc
actggtgccatgcagttttctcataaattggagctgacaccaaaacaatatcctgatatt
tggaataaaacaggacctgttaaactaatcagatggtcacctgatagctgtgttgtgatg
gtgacctgggaatgtggaggcttgtccttgtggagtgtttttggtgctcagcttatctgt
actttaggaggtgattttgcgtatcagtctgatggtgccaaaaaggaccctctaaagatc
agttccatgacctggggatcagaagggtatcatctgtgggttattgatggaagttcttcc
aacatgaagcctgaaagagatggaaataatgaagctcgccaatttggtattctgcagttt
cattttatcaagagcgcactcactgttaatccttgtatgagtaaccaggaacaagtcctc
cttcaaggagaagatcgcttgtatttgaactgtggggatgcaacacaggcgcagagtccc
aggaatacttcagtacactctgaacacaagcctgccaggnnnnnnnnccctttttcagat
ggaagtttagattctcagggtttaagcactttactaggacacaggcattggcatgttgta
cagattcatagtacatatctagagagcaactggcctataaggttttcggctattgacaag
cttggacagaatgtagctgttgttggcaagtttggttttgcacattattccttactcacc
aaaaaatggaagctgtttggaaacattacgcaggagcaaaatatgatggtaacaggtggc
ttagcatggtggaatgacttcattgttcttgcatgttataatttgaatgatcatcaggaa
gagctgagaatctacctgcgaacatctaatcttgacaatgcatttgcacacatcaccaaa
gtgcaagcagacacgttactactgagtgtcttccgggacattgtaatattgttcagagca
gactgttccatttgcctttacagtattgagagaaggccagaaggtcttaaccctactgcc
agtatccaagttcttcaagaagtgtctatgtctcggtacattcctcatccttttcttgta
gtgtctgttacattgacatcagtgaggacagagactggcatcaccttgaagatgcctcag
caggcttgtgaagctgaaagtattatgctaaacttagcaggacaactcattatgttgcaa
agggatcgatctggaccccagatacgagacaaggatagtaatcctaatcaaaggaagcat
ctgcctttttgtgctccagttgtcctagcccagtctgttgaaaatgtatggactacttgc
aggatcaacaaacagaaacgccacttactggaggctctgtggctcagctgtggtggggca
gagatgaaagtctggcttcccctgtttcccagagatcatcgaaaaccgcattcctttctg
tcgagacgtatcatgctgccttttcacatcaacatatacccactggctgttttgtttgaa
gatgccttggttcttggtgctgttaatgacactgtgctctatgactgtttatacactcaa
accagtgctagagaacacttagaggttctctttcctttctccattgttgagagaacttct
cagatctacctccatcacattttacgccagctcttggttcggaaccttggtgaacaagcc
ttgcttttggcccactcctgtgccacactaccgtactttcctcacgtactagaactgatg
cttcatgaagtgctggaagaagaagctacctcgcgggaacccattcccgaccctctgctt
cccactgtggcaaagttcattacagagttccccctcttcctgcagacagttgttcattgt
gctaggaagacagaatatgccctgtggaattacctttttgctgctgttggaaacccgaag
gacttatttgaagagtgcttaatggcccaggacttggacacagctgcctcttatcttatt
atcctacagaatatggaagttccagcagttagcagacagcatgctactctcctatttaat
actgccttagagcagggaaagtgggacctctgtcgtcatatgatcagatttcttaaagcc
attggctctggtgagacagagacacctccagctacaccaacaactcaggaacctagttca
agtagtggctttgagttcttcagacatcgcagcattagtttatcccaatcagcagagaat
ctccatggcaaattcagtttgccaaaaacactgagcatgccctctggcccatcaggaaaa
aggtggagtaaagacagtgactgtgctgagaacatgtacattgacatgatgctctggcgg
catgctcggcgtctgctggaagagatcaagctgaaagaccttggctgctttgctgcacag
ctgggcttcgagctgatcggctggctctgcaaggagcgagccagagcggcacgcgtggac
gactttgtcttcgctttgaaaaagctacacaaggatttcctctggccatttccagtcata
ccagcttcatccatcaattcacctttcaagaatggaaagtacaagacagccgtgggggag
cagctgctaaaatctcggtctgcagacacctttgtaaacatggaaatggacacaggggtt
tcaaacacaccccggagtcgcagctggcttggcactgtgagctcctctcagagagagatt
gacacagtttcatcacatggaccacacatgcaagatgcattcctttctcctttgctaagt
aaaggtgatgaatgcagcattggttcagcaacagacctgactgaaacaagttccatggtg
gatggtgactggaccatggtggatgaaaacttctccagtctaagcttaactcagtcagag
cttgaacacatatctctagaactggcaagtaaagggccacacaagtcacaggttcagctg
cggtacttgctacatatcttcatggaagcaggatgtctggactggtgcattatcataggc
cttatcctcagagaatcttcagtgatcaaccaggttttcagtataatgcagtcctcagat
attgatcgagaaatctgtcagaatatcaagactggcctatatgctgttgacagatgggct
tctacagattgccctgggtacaagccatttctaaatatcatcaaaccacagatccagaaa
ctaagtgaaatagcagaagagcaggtacagcctgaagcttttcagccagtgaatccttct
aaggttgctgagcaagtgaaccccagagctgaggaaagcaggactttatctagccatggc
actaaccctcagagtgatgctgggaacagcagtgcaagcaggcacgaagaggacaagtct
aagacagaggatgcggattcattccaagaaggcagttatgactgtattgtgtcttaa
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