KEGG   Chaetura pelagica (chimney swift): 104391374
Entry
104391374         CDS       T08631                                 
Symbol
RIC1
Name
(RefSeq) protein RIC1 homolog isoform X1
  KO
K20476  RAB6A-GEF complex partner protein 1
Organism
cpea  Chaetura pelagica (chimney swift)
Brite
KEGG Orthology (KO) [BR:cpea00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:cpea04131]
    104391374 (RIC1)
Membrane trafficking [BR:cpea04131]
 Endoplasmic reticulum (ER) - Golgi transport
  Retrieval pathways
   Rab associated proteins
    104391374 (RIC1)
SSDB
Motif
Pfam: RIC1 PEP5_VPS11_N
Other DBs
NCBI-GeneID: 104391374
NCBI-ProteinID: XP_009998943
LinkDB
Position
Unknown
AA seq 1418 aa
MYFLSGWPRRLLCPLESMEQPLYIQTDPQRAFFAVLSRSQLSIWYCRPSVLIVSYKELSK
AASQFGPYKQAEWRPDSTMIAVSTANGYILFFEVPPARDKYLYEPMYPKGSPHLKGTPHY
KEEQCAPSLNLEMKKVLDLQASITSLQSMLEDLLVATADGFLHLVHWDGMTNGRKAINLC
TVPFSVDLQSSRAGSFLGFEDVYIRDMEYCATLDGFAVVFNDGRVGFITPMSSRFAAEQL
HGVWAQDVIDGTCVAVNNKYRLMAFGCANGSVQVYTIDTTTGAMQFSHKLELTPKQYPDI
WNKTGPVKLIRWSPDSCVVMVTWECGGLSLWSVFGAQLICTLGGDFAYQSDGAKKDPLKI
SSMTWGSEGYHLWVIDGSSSNMKPERDGNNEARQFGILQFHFIKSALTVNPCMSNQEQVL
LQGEDRLYLNCGDATQAQSPRNTSVHSEHKPARXXXPFSDGSLDSQGLSTLLGHRHWHVV
QIHSTYLESNWPIRFSAIDKLGQNVAVVGKFGFAHYSLLTKKWKLFGNITQEQNMMVTGG
LAWWNDFIVLACYNLNDHQEELRIYLRTSNLDNAFAHITKVQADTLLLSVFRDIVILFRA
DCSICLYSIERRPEGLNPTASIQVLQEVSMSRYIPHPFLVVSVTLTSVRTETGITLKMPQ
QACEAESIMLNLAGQLIMLQRDRSGPQIRDKDSNPNQRKHLPFCAPVVLAQSVENVWTTC
RINKQKRHLLEALWLSCGGAEMKVWLPLFPRDHRKPHSFLSRRIMLPFHINIYPLAVLFE
DALVLGAVNDTVLYDCLYTQTSAREHLEVLFPFSIVERTSQIYLHHILRQLLVRNLGEQA
LLLAHSCATLPYFPHVLELMLHEVLEEEATSREPIPDPLLPTVAKFITEFPLFLQTVVHC
ARKTEYALWNYLFAAVGNPKDLFEECLMAQDLDTAASYLIILQNMEVPAVSRQHATLLFN
TALEQGKWDLCRHMIRFLKAIGSGETETPPATPTTQEPSSSSGFEFFRHRSISLSQSAEN
LHGKFSLPKTLSMPSGPSGKRWSKDSDCAENMYIDMMLWRHARRLLEEIKLKDLGCFAAQ
LGFELIGWLCKERARAARVDDFVFALKKLHKDFLWPFPVIPASSINSPFKNGKYKTAVGE
QLLKSRSADTFVNMEMDTGVSNTPRSRSWLGTVSSSQREIDTVSSHGPHMQDAFLSPLLS
KGDECSIGSATDLTETSSMVDGDWTMVDENFSSLSLTQSELEHISLELASKGPHKSQVQL
RYLLHIFMEAGCLDWCIIIGLILRESSVINQVFSIMQSSDIDREICQNIKTGLYAVDRWA
STDCPGYKPFLNIIKPQIQKLSEIAEEQVQPEAFQPVNPSKVAEQVNPRAEESRTLSSHG
TNPQSDAGNSSASRHEEDKSKTEDADSFQEGSYDCIVS
NT seq 4257 nt   +upstreamnt  +downstreamnt
atgtatttcctcagcggctggccccggaggctgctgtgtcctctggaatccatggagcag
cctctgtacatccagacggatccccagagagctttcttcgccgtgttgtcccggtctcag
ctcagcatctggtactgtaggcccagtgtattaatagtaagctacaaggaactatcaaaa
gcagcttctcagtttggaccttataaacaagcagaatggcggcctgatagcaccatgata
gctgtttcaactgcaaatggatacatcttattttttgaagtaccgccagcaagagacaag
tacctttatgagccaatgtatcccaaaggaagtccacatctgaagggaaccccacattat
aaggaagaacaatgtgccccttcattaaatctagaaatgaagaaagtgctggacttgcaa
gcctctatcacaagtttgcagtccatgttagaagatctgcttgttgcaactgctgatggg
tttctccatcttgttcactgggatggtatgaccaatggaaggaaagccatcaacctatgt
acagttccattttctgtggacctgcagtcttctcgagcaggttcatttttgggctttgaa
gatgtttacatcagagatatggaatactgtgccacacttgatggttttgctgttgttttt
aatgatggcagagttggtttcattacaccaatgtcaagtagattcgctgctgagcagctc
catggtgtttgggcacaagatgtgattgatggaacttgtgtggcagtaaataacaaatac
aggctaatggcatttggatgtgccaatggctctgttcaggtttatacgatagataccacc
actggtgccatgcagttttctcataaattggagctgacaccaaaacaatatcctgatatt
tggaataaaacaggacctgttaaactaatcagatggtcacctgatagctgtgttgtgatg
gtgacctgggaatgtggaggcttgtccttgtggagtgtttttggtgctcagcttatctgt
actttaggaggtgattttgcgtatcagtctgatggtgccaaaaaggaccctctaaagatc
agttccatgacctggggatcagaagggtatcatctgtgggttattgatggaagttcttcc
aacatgaagcctgaaagagatggaaataatgaagctcgccaatttggtattctgcagttt
cattttatcaagagcgcactcactgttaatccttgtatgagtaaccaggaacaagtcctc
cttcaaggagaagatcgcttgtatttgaactgtggggatgcaacacaggcgcagagtccc
aggaatacttcagtacactctgaacacaagcctgccaggnnnnnnnnccctttttcagat
ggaagtttagattctcagggtttaagcactttactaggacacaggcattggcatgttgta
cagattcatagtacatatctagagagcaactggcctataaggttttcggctattgacaag
cttggacagaatgtagctgttgttggcaagtttggttttgcacattattccttactcacc
aaaaaatggaagctgtttggaaacattacgcaggagcaaaatatgatggtaacaggtggc
ttagcatggtggaatgacttcattgttcttgcatgttataatttgaatgatcatcaggaa
gagctgagaatctacctgcgaacatctaatcttgacaatgcatttgcacacatcaccaaa
gtgcaagcagacacgttactactgagtgtcttccgggacattgtaatattgttcagagca
gactgttccatttgcctttacagtattgagagaaggccagaaggtcttaaccctactgcc
agtatccaagttcttcaagaagtgtctatgtctcggtacattcctcatccttttcttgta
gtgtctgttacattgacatcagtgaggacagagactggcatcaccttgaagatgcctcag
caggcttgtgaagctgaaagtattatgctaaacttagcaggacaactcattatgttgcaa
agggatcgatctggaccccagatacgagacaaggatagtaatcctaatcaaaggaagcat
ctgcctttttgtgctccagttgtcctagcccagtctgttgaaaatgtatggactacttgc
aggatcaacaaacagaaacgccacttactggaggctctgtggctcagctgtggtggggca
gagatgaaagtctggcttcccctgtttcccagagatcatcgaaaaccgcattcctttctg
tcgagacgtatcatgctgccttttcacatcaacatatacccactggctgttttgtttgaa
gatgccttggttcttggtgctgttaatgacactgtgctctatgactgtttatacactcaa
accagtgctagagaacacttagaggttctctttcctttctccattgttgagagaacttct
cagatctacctccatcacattttacgccagctcttggttcggaaccttggtgaacaagcc
ttgcttttggcccactcctgtgccacactaccgtactttcctcacgtactagaactgatg
cttcatgaagtgctggaagaagaagctacctcgcgggaacccattcccgaccctctgctt
cccactgtggcaaagttcattacagagttccccctcttcctgcagacagttgttcattgt
gctaggaagacagaatatgccctgtggaattacctttttgctgctgttggaaacccgaag
gacttatttgaagagtgcttaatggcccaggacttggacacagctgcctcttatcttatt
atcctacagaatatggaagttccagcagttagcagacagcatgctactctcctatttaat
actgccttagagcagggaaagtgggacctctgtcgtcatatgatcagatttcttaaagcc
attggctctggtgagacagagacacctccagctacaccaacaactcaggaacctagttca
agtagtggctttgagttcttcagacatcgcagcattagtttatcccaatcagcagagaat
ctccatggcaaattcagtttgccaaaaacactgagcatgccctctggcccatcaggaaaa
aggtggagtaaagacagtgactgtgctgagaacatgtacattgacatgatgctctggcgg
catgctcggcgtctgctggaagagatcaagctgaaagaccttggctgctttgctgcacag
ctgggcttcgagctgatcggctggctctgcaaggagcgagccagagcggcacgcgtggac
gactttgtcttcgctttgaaaaagctacacaaggatttcctctggccatttccagtcata
ccagcttcatccatcaattcacctttcaagaatggaaagtacaagacagccgtgggggag
cagctgctaaaatctcggtctgcagacacctttgtaaacatggaaatggacacaggggtt
tcaaacacaccccggagtcgcagctggcttggcactgtgagctcctctcagagagagatt
gacacagtttcatcacatggaccacacatgcaagatgcattcctttctcctttgctaagt
aaaggtgatgaatgcagcattggttcagcaacagacctgactgaaacaagttccatggtg
gatggtgactggaccatggtggatgaaaacttctccagtctaagcttaactcagtcagag
cttgaacacatatctctagaactggcaagtaaagggccacacaagtcacaggttcagctg
cggtacttgctacatatcttcatggaagcaggatgtctggactggtgcattatcataggc
cttatcctcagagaatcttcagtgatcaaccaggttttcagtataatgcagtcctcagat
attgatcgagaaatctgtcagaatatcaagactggcctatatgctgttgacagatgggct
tctacagattgccctgggtacaagccatttctaaatatcatcaaaccacagatccagaaa
ctaagtgaaatagcagaagagcaggtacagcctgaagcttttcagccagtgaatccttct
aaggttgctgagcaagtgaaccccagagctgaggaaagcaggactttatctagccatggc
actaaccctcagagtgatgctgggaacagcagtgcaagcaggcacgaagaggacaagtct
aagacagaggatgcggattcattccaagaaggcagttatgactgtattgtgtcttaa

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