Chaetura pelagica (chimney swift): 104391425 Help Entry 104391425         CDS       T08631                                  Symbol HIF1A Name (RefSeq) hypoxia-inducible factor 1-alpha   KO K08268   hypoxia-inducible factor 1 alpha Organism cpea  Chaetura pelagica (chimney swift) Pathway cpea04137   Mitophagy - animal cpea04140   Autophagy - animal cpea04148   Efferocytosis Brite KEGG Orthology (KO) [BR:cpea00001]  09140 Cellular Processes   09141 Transport and catabolism    04140 Autophagy - animal     104391425 (HIF1A)    04137 Mitophagy - animal     104391425 (HIF1A)    04148 Efferocytosis     104391425 (HIF1A)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03000 Transcription factors [BR:cpea03000]     104391425 (HIF1A) Transcription factors [BR:cpea03000]  Eukaryotic type   Basic helix-loop-helix (bHLH)    Factors with PAS domain     104391425 (HIF1A) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  bHLH_HIF1A PAS_3 PAS_11 HIF-1a_CTAD PAS HIF-1 PAS_9 PAS_4 HLH Motif Other DBs NCBI-GeneID:  104391425 NCBI-ProteinID:  XP_009999000 LinkDB All DBs Position Unknown AA seq 868 aa AA seqDB search MGLSELPATLGDIWGIQHPLIDCTDTYGQVEFKAAEVIFTFVSEIRGPKKEDKESPDGIS PLPLVFHQEKRISSERRKEKSRDAARCRRSKESEVFYELAHQLPLPHTVSAHLDKASIMR LTISYLRMRKLLDAGELETEAKMEKELNCFYLKALDGFVMVLSEDGDMIYMSENVNKCMG LTQFELTGHSIFDFAHPCDHEELREMLTHRNGPVKKGKEQNTERSFFLRMKCTLTSRGRT VNIKSATWKVLHCTGHIRVYDTCGNQTHCGYKKPPMTCLVLICEPIPHPSNIEVPLDSKT FLSRHSLDMKFSYCDERITELMGYEPEELLGRSIYEYYHALDSDHLTKTHHDMFTKGQVT TGQYRMLAKQGGYVWVETQATVIYNTKNSQPQCIVCVNYVLSGIVQKDLIFSLGQTECML KPVESPDMKMTKIFSKDDLDDTNSLFEKLKQEPDALTVLAPAAGDTIISLDFSSNESDEQ QCDEVPLYNDVMLPSSSEKLQNINMAMSPLPASETTKPLRSNADPALNREVVSKLEPNTE PLELSFTMPQVQEQPTSPSDASTSQSSPEPSSPNDYCFHVDNEIAEFKLELVEKLFAIDT EAKNPFSTQETDLDLEMLAPYIPMDDDFQLRSFDQLSPLESSSSGSQNAAITIFQQPQTP SSTADEKKPVTEHVDDVKTLIAPSSPAHIISETSSAPASPYSGNRSRTASPNRAGKGTLD QTEKSCPGVPSLLTVTLNKRSTAMDEELNPKMLALHNAQRKRKMEHDGSLFQAVGIGTLF QQTGDRGGNASLAWKRVKGCKTTGPNGVEQKTIILLSTDIASKLLGQSMDESGLPQLTSY DCEVNAPVQGNRNLLQGEELLRALDQVN NT seq 2607 nt NT seq  +upstreamnt  +downstreamnt atggggctttcagagctgcctgccaccctgggtgacatttggggaattcaacatccccta attgactgcacagacacttacgggcaggttgaatttaaggcagcagaagtaatttttacc tttgttagtgaaatccgtggtccaaaaaaagaggacaaagagagtccagatggtatttca cctctgcccttggttttccaccaagagaaaaggattagctcggagcgcaggaaagagaag tcaagagatgcagcccggtgccggaggagcaaggaatccgaagtgttctacgagctggct catcagctgcccctgccccacactgtgagtgcacatctggacaaggcttccattatgaga ctgaccatcagctacctgcgcatgagaaagctgctagatgctggtgagctggaaacagaa gccaaaatggagaaggaactgaactgtttctacttgaaagctcttgatggatttgtcatg gttctgtctgaagatggggacatgatttacatgtctgaaaatgtgaacaagtgcatggga ctcactcagtttgagttgacggggcacagtatatttgattttgctcatccatgtgaccat gaagagctgagagaaatgcttacacacagaaatggtcctgtgaaaaagggcaaagagcaa aacacggagcgcagcttttttctcagaatgaagtgcacactgactagcaggggaagaaca gtgaatataaagtctgctacgtggaaggtactgcactgcactggacacatccgtgtgtac gacacatgtggtaatcaaacccactgtggctataaaaagcctcccatgacatgtctggtg ttgatctgtgaacctattcctcatccatcaaacattgaggtccccttggacagtaaaacc ttcctcagtcgtcacagtcttgatatgaagttttcctactgtgatgaaagaattacagag ttgatgggctatgagccagaggaactcctgggtcgctcaatctatgagtactatcatgca ctggattctgatcatctgaccaaaacacaccacgacatgttcacaaaagggcaggtgaca acaggacagtacagaatgcttgctaaacaaggtggctatgtctgggttgaaactcaagca actgttatatacaacactaagaattctcagccacagtgcatagtgtgcgtaaactacgtg ctgagtggaattgttcagaaggacttgattttttcccttggacaaaccgagtgtatgcta aaaccagtggagtctcctgatatgaaaatgaccaaaatattcagcaaagatgacctggat gataccaacagcctatttgaaaaacttaaacaggaaccagatgctttaactgtgctggcc ccagctgctggagacacaattatctctctagatttcagcagtaatgagtctgatgaacaa caatgtgatgaagttcctttgtataatgatgtaatgctcccctcatccagtgagaaattg cagaatataaatatggcaatgtccccactacctgcctctgaaactacaaagccacttcgt agcaatgctgatcctgcactcaatagagaggttgtatcaaagctggagccaaacacagag ccactcgaactttcttttaccatgcctcaggtgcaagagcaaccaaccagcccttctgat gcaagtaccagccaaagttcacctgagcccagtagtccaaacgactactgctttcatgtg gataatgaaatagctgagttcaaattggaattggtggagaagctctttgcaatagataca gaagcgaaaaatccattttctactcaggaaactgatttagatttggagatgttggctcct tacatcccaatggatgatgacttccagttgcgctcctttgatcagctgtccccactggaa agcagttcatctggctctcagaatgcagccattaccatcttccagcagcctcagacacca tcaagtactgctgatgaaaaaaaaccagtgacagaacatgtggatgatgtgaagacgcta attgcaccttcatctcctgcccacatcatcagtgaaacgagtagtgccccagcatcacct tatagtggcaataggagtcgaaccgcgtctccgaaccgagcgggaaaaggaacgttggat cagacggaaaaatcttgtccgggagtgcccagtttgctaacagtcactctgaacaaaaga tctactgcaatggatgaagaactaaatccaaagatgctagctttgcataatgctcagaga aaacgaaaaatggaacatgatggttcactttttcaggcagttggaattgggactttattc cagcagacaggtgaccgtggaggaaatgcatcacttgcttggaagcgtgtaaagggatgc aaaacaactggtcctaatggagtggagcaaaagacaatcattctgctatcaactgacata gcaagtaaacttctagggcagtcgatggatgaaagtggactaccccagctcaccagttac gattgcgaagtaaacgcacccgtacaaggcaacagaaacctgctacagggtgaagaactg ctcagagctctggatcaagttaactga

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