Chaetura pelagica (chimney swift): 104391448
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Entry
104391448 CDS
T08631
Symbol
POLR3A
Name
(RefSeq) DNA-directed RNA polymerase III subunit RPC1
KO
K03018
DNA-directed RNA polymerase III subunit RPC1 [EC:
2.7.7.6
]
Organism
cpea
Chaetura pelagica (chimney swift)
Pathway
cpea03020
RNA polymerase
cpea04623
Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:
cpea00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
104391448 (POLR3A)
09150 Organismal Systems
09151 Immune system
04623 Cytosolic DNA-sensing pathway
104391448 (POLR3A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cpea03021
]
104391448 (POLR3A)
Enzymes [BR:
cpea01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
104391448 (POLR3A)
Transcription machinery [BR:
cpea03021
]
Eukaryotic type
RNA polymerase III system
RNA polymerase III
Core subunits
104391448 (POLR3A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-GeneID:
104391448
NCBI-ProteinID:
XP_009999024
LinkDB
All DBs
Position
Unknown
AA seq
1369 aa
AA seq
DB search
MKSPEEMRQQAHIQVVSKNLYSQDNHHSPLQYGVLDHRMGTSEKDRPCETCGKNLADCLG
HYGYIDLELPCFHVGYFKAVIGILQMICKTCCHIMLSVEEKKQFLDYLKRPGLTYLQKRG
LKKKVSEKCRKKNTCPYCGAFNGTVKKCGLLKIIHEKYKTNKKVVDPVVSTFLQSFETAI
EHNKEVEPLLGRAQENLNPLVVLNLFKRIPAEDIPLLLMNPEAGKPSDLILTRLLVPPLC
IRPSVVSDLKSGTNEDDLTMKLTEIIFLNDVIKKHRISGAKTQMIMEDWDFLQLQCALYI
NSELSGIPLNMAPKKWTRGFVQRLKGKQGRFRGNLSGKRVDFSGRTVISPDPNLRIDEVA
VPVHVAKILTFPEKVNKANINFMRKLVCNGPDVHPGANFIQQRHTQMKRFLKYGNREKMA
QELKFGDVVERHLIDGDIVLFNRQPSLHKLSIMAHIARVKPHRTFRFNECVCTPYNADFD
GDEMNLHLPQTEEAKAEALVLMGTKANLVTPRNGEPLIAAIQDFLTGAYLLTLKDTFFDR
AKACQIIASILVGKDEKIKVRLPPPAILKPVTLWTGKQVFSLILKPSDDCPVKANLRTKG
KQYCGKGEDLCYNDSYVTIQNSELMSGSMDKGTLGSGSKNNIFYILLRDWGQVEAADAMS
RLARLAPVYLSNRGFSIGIGDVTPGQGLLKAKYELLNAGYKKCDEYIEALNTGKLQQQPG
CTAEETLEALILKELSVIRDHAGSACLRELDKSNSPLIMALCGSKGSFINISQMIACVGQ
QAISGSRVPDGFENRSLPHFEKHSKLPAAKGFVANSFYSGLTPTEFFFHTMAGREGLVDT
AVKTAETGYMQRRLVKSLEDLCSQYDLTVRSSTGDIIQFIYGGDGLDPAAMEGKDEPLEF
KRVLDNIRAVYPCRSEPALSKNELVLTSESIMKKNEFLCCRDSFLQEIKKFIKGVSEKIK
KTRDKYGINDNGTTEPRVLYQLDRITPTQLEKFLETCRDKYMRAQMEPGSAVGALCAQSI
GEPGTQMTLKTFHFAGVASMNITLGVPRIKEIINASKAISTPIISAQLDKDDDPDFARLV
KGRIEKTLLGEISEYIEEVFLPDDCFILVKLSLERIRLLRLEVNAETVRYSICISKLRVK
PGDVAVHGEAVVCVTPRENSKSSMYYVLQSLKEELPKVVVQGIPEVSRAVIHIDEQSGKE
KYKLLVEGDNLRAVMATHGVKGTKTTSNNTYEVEKTLGIEAARTTIINEIQYTMVNHGMS
IDRRHVMLLSDLMTYKGEVLGITRFGLAKMKESVLMLASFEKTADHLFDAAYFGQKDSVC
GVSECIIMGIPMNIGTGLFKLLHKADKESTPPRRPLIFDNNEFHIPIVT
NT seq
4110 nt
NT seq
+upstream
nt +downstream
nt
atgaagtctccggaggagatgcgtcagcaagcccacattcaagtggtcagcaaaaacttg
tacagtcaggacaaccaccactccccgctgcagtacggagtgctcgatcatcgcatggga
accagtgaaaaagaccgaccctgtgaaacctgtggaaaaaatctagctgattgtttagga
cattatggatacattgacttagaactaccatgtttccatgttggatatttcaaagctgtg
ataggcatcttacagatgatctgcaaaacctgttgccatatcatgctatcagtggaagaa
aaaaagcaatttttggattacctgaaacgacctggcctgacttaccttcagaaaagaggg
ctgaaaaaaaaagtgtctgaaaaatgccgaaagaaaaacacttgtccttactgtggtgcg
tttaatggaactgtgaagaagtgtggtttgttgaaaataatacatgaaaaatacaagacc
aataagaaagtggtagatccagtagtatctacttttcttcagtcctttgaaactgccata
gaacataacaaagaagtagaacccttactggggagagctcaggaaaacttgaatccttta
gtagtattgaacctctttaaaagaatcccagcagaagacattcccctgcttctaatgaat
ccagaagcaggcaagccttcagatttgatcctgacgcgacttttagtgcctcctctgtgt
atcagaccctctgtcgtgagtgatttgaaatctggcaccaatgaagatgacttgacaatg
aaattgacagagataattttcctcaatgacgtaataaaaaagcataggatatcaggagcc
aaaacacagatgattatggaagactgggactttcttcaactgcagtgtgctctgtacatt
aacagtgagctctcaggaattcctcttaacatggcacctaaaaaatggaccaggggtttt
gttcagagacttaaaggaaagcaaggtcggtttagaggcaatctgtctgggaagcgcgtg
gatttctctggccgaacagtaatttcacctgatcctaacttaagaatagatgaagtagca
gtgcctgtccatgttgctaaaatactaacctttcctgaaaaggtgaacaaagcaaatatt
aattttatgagaaaacttgtctgtaatggtcctgatgttcatcctggagccaactttata
cagcaaaggcacacacagatgaaaagatttttgaaatacggaaaccgagaaaagatggcc
caggagctgaagtttggtgatgttgtggagcgacatcttatagatggtgacatagtcctg
ttcaaccgacaaccctctcttcataagttgagcattatggctcacattgctagagtaaaa
cctcataggacattcagatttaatgaatgtgtctgtacaccatacaatgcagactttgat
ggagatgagatgaaccttcaccttcctcagacagaagaagcaaaagcagaagcacttgtt
ttaatggggactaaagcaaatttggtaacaccaagaaatggagaaccccttattgctgct
attcaagattttctcacaggtgcctatcttcttacattaaaagatacctttttcgataga
gccaaagcctgtcaaataattgcttctatcctggttggcaaggatgaaaagattaaagtt
cgtcttccacctccagccattctgaagcctgtaacactttggacaggaaaacaggttttc
agcctcattctcaaacccagtgatgattgtcctgtaaaagccaatctgcgaaccaagggc
aaacagtattgtggcaaaggggaagacctgtgttacaatgattcttatgtcacaattcaa
aacagtgagttaatgagtggcagcatggacaaaggaaccttaggttcaggttccaagaac
aacatcttctacatcttgctgagagactggggacaggtagaagctgcagatgccatgtca
cgactagcaagacttgctcctgtatatctttctaatcgtggcttttcaattggaattggt
gatgtaacccctgggcagggtctgctaaaagctaaatatgagctcctgaatgctggctat
aagaaatgtgatgagtatattgaagctttgaacactggcaagctacagcagcagcctggc
tgtactgcagaggagacactagaggccttaatccttaaagaactctctgttatcagagat
catgctggcagtgcttgtctcagagaactggacaagagcaacagtccccttatcatggct
ctctgtggttctaaaggctccttcattaatatatcccagatgattgcctgtgtcggtcag
caggctatcagtgggtcccgagttcctgatggatttgagaacagatccttgcctcacttt
gagaagcattctaagctcccagcagcaaaaggctttgttgctaatagcttctattctggg
ttgactcccactgagttttttttccatacaatggctggtcgagaaggtctggttgacaca
gctgtaaaaacagctgaaactggatatatgcagaggcggctggtaaaatcacttgaagat
ctttgctcacagtatgatttaacagtcagaagttctactggtgacattatacagttcatt
tatggaggagatggcttggatcctgcagccatggaagggaaggatgaaccactggagttc
aagcgtgttctagacaatatcagagctgtatatccatgccgaagtgaaccagcccttagt
aaaaatgaattggtgttaacatctgagtccatcatgaagaagaatgaattcctttgttgc
cgagacagttttctgcaggaaattaaaaaattcatcaaaggtgtttctgagaagataaaa
aaaactagggacaagtatggcattaatgacaatggcacaacagagccacgagttttatat
cagttggataggattactccaacacaactagaaaagtttctggagacttgtagggacaaa
tacatgagggcacagatggagcctggttctgcagtaggagctctttgtgcacagagtatt
ggtgagcctggcacacagatgactctcaagactttccattttgctggtgttgcttcaatg
aacattactttgggtgtgccaagaatcaaagaaatcattaatgcttcaaaggcaattagc
acccctattatatcagcacagttggacaaagatgatgatcctgattttgctcgtctggtt
aaaggaagaattgagaaaaccttgttaggagagatttcagaatatattgaggaagtgttt
cttccagatgattgtttcatcctagtgaagctgtctttagaacgtattagactactgaga
ttagaggtgaatgcagagactgtgcgttactctatttgcatatctaaactcagagtaaag
cctggggatgttgctgtccatggagaagcagttgtgtgtgtgaccccccgtgaaaacagc
aagagttcaatgtattatgtattgcagtccctgaaggaagaactgccaaaggttgtagtg
caaggtataccagaggtttcccgagccgtcattcatattgatgaacaaagtggaaaggaa
aaatataaacttctagtagaaggtgataatctgcgagctgttatggctactcacggagtg
aaaggaacaaaaacaacatctaacaacacttatgaggtagagaagaccctaggaattgaa
gctgctcggacaaccattatcaatgagattcagtatacaatggtgaatcatggtatgagc
attgacaggagacatgttatgttgctgtctgatctaatgacttacaagggtgaagtcctg
ggcattactaggtttggactggcaaaaatgaaagaaagtgtgttgatgttggcttctttt
gaaaagactgcagaccatctatttgatgctgcctactttgggcagaaggattctgtttgt
ggtgtttctgagtgcataatcatgggaattcccatgaatattggaacaggtctttttaaa
ctgttgcacaaagcagacaaagaatcaacccctcctaggaggcctctgatatttgataat
aatgaatttcatattcctattgttacatag
DBGET
integrated database retrieval system
