Chaetura pelagica (chimney swift): 104391463
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Entry
104391463 CDS
T08631
Symbol
ZSWIM8
Name
(RefSeq) zinc finger SWIM domain-containing protein 8
KO
K25207
zinc finger SWIM domain-containing protein 8
Organism
cpea
Chaetura pelagica (chimney swift)
Brite
KEGG Orthology (KO) [BR:
cpea00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cpea04121
]
104391463 (ZSWIM8)
Ubiquitin system [BR:
cpea04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul2 complex
Target recognizing subunit
104391463 (ZSWIM8)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ZSWIM4-8_C
SWIM
Motif
Other DBs
NCBI-GeneID:
104391463
NCBI-ProteinID:
XP_009999065
LinkDB
All DBs
Position
Unknown
AA seq
1833 aa
AA seq
DB search
MELMFAEWEDGERFSFEDSDRFEEDSLCSFISEAESLCQNWRGWRKQSAGPNSPTGGTKA
AGSGGASPTPNGLVIPLVELSAKQVAFHIPFEVVEKVYPPVPEQLQLRIAFWSFPENEED
IRLYSCLANGSADEFQRGEQLFRVRAVKDPLQIGFHLSATVVPPQMVPPKGAYNVAVMFD
RCRITSCSCTCGAGAKWCAHVVALCLFRIHNASAVCLRAPVSESLSRLQRDQLQKFAQYL
ISELPQQILPTAQRLLDELLSSQSTAINTVCGAPDPTAGPSASDQSTWYLDESTLSDNIK
KTLHKFCGPSPVVFSDVNSMYLSSTEPPAAAEWACLLRPLRGREPEGIWNLLSIVREMFK
RRDSNAAPLLEILTDQCLNYEQITGWWYSVRTSASHSSASGHTGRSNGQSEVAAHACASM
CDEMVVLWRLAVLDPTISPQRHRDLCSQLRQWQLKVIDNVKRGQHKKSLEKLFQGFKPAV
EACYFNWEEAYPIPGITYSSSDKKNSFCWVKAIQQRSCRLQCAETACDAGRTHGQEPGGP
YLQPGDRLRPSPQEPAVRPKELTGKRKVVSETPQRVLRRLSAEGDKAVYKTAVGKAKLPV
SKGLTSKHSGKRRMSSEDSSLEPDLAEMSLDDSSLALGAEASNTFSFTESPLSRSYRDTF
EEDGGVYFSEGPEPSIRSSSMAKKSPKDPVGEMGSGDDDLPSADENSGGVSLKPEEVGEN
GAAGGGDDGEEEDDYQVYYLNPQEVAKEDDDKAEGGNEEEQDIFAGIKPLEQENRMEILF
ACAEALYAHGYSNEACCLTVELARDLLANPPDLKVEQPPSKGKKNKVSTSKQTWMATNTL
SKAAFLLTVLSERLEYHNLAFQIGMFALELQRPPASTKALEVKLAYQESEIAALLKKIPL
GTNEMNTIRGRAEELREGTLCDYRPVLPLMLASFIFDVLCTPVVSPTGSRPPSRNWNNEM
PGDEELGFEAAVAALGMKTTVSEAEHPLLCEGTRREKGDLALVLMITYKDDQSKLKKILD
KLLDRESQTHKPQTLSSFYSSSKPTVANQKSPSKHAAQSTAAIQQLPGTSVTQQASVSTA
VQSSPENFVDKSAQESSQRSPCEPATEATVLKQEGKVPSRLALGNRGGYNGRCWGSPVRQ
KKKHTGMASIDSSAPETTSDSSPTLSRRPLRGGWATTSWGRGQDSDSISSSSSDSLGSSS
SSGSRRASGGARAKTVEVGRYKGRRLESHAPHVPNQPSEAAAHFYFELAKTVLIKAGGNS
STSIFTHPSSSGGHQGPHRNLHLCAFEIGLYALGLHNFVSPNWLSRTYSSHVSWITGQAM
EIGSAALNILVECWDGHLTPPEVASLADRASRARDSNMVRAAAELALSCLPHAHALNPNE
IQRALVQCKEQDNLMLEKACMAVEEAAKGGGVYPEVLFEVAHQWYWLYEQTVGGTPAQRE
GATGCSASGTRAASEAARGLTDNRVTSEPTTVTVAAAVTAAATVMPVISVGSTMYQQHTM
AGPAMAHTHTQGLHPNTTLQTHIPCNPQYIGHTIQHMPRPAVFPVPGSAYPQGVHPAFIG
AQYPYSVTTPSLAATAVSFPGVPVPSMTQIAVHPYHSETGLSLSSNVAIGSVHAGSTFPA
IQGSSLTTLSSQPNSLVTGGFPAEDEQHSQPVSPQGLHYLHSAYRVGMLALEMLGRRAHN
DHPNNFSRSPPYTEDVKWLLGLAAKLGVNYVYQFCVGAAKGVLSPFVLQEIIMEALQRLN
PAHVHNHLRTPAFHQLVQRCQQAYIQYIHHRLIHLTPAYYDDFVNAIRSARSAFCLTPMG
MMQFNDILQNLKRSKQTKELWQRVSLEMTTFSP
NT seq
5502 nt
NT seq
+upstream
nt +downstream
nt
atggaactcatgttcgcagagtgggaggacggggagaggttttcatttgaagattctgat
cgctttgaagaagactctctttgttccttcatctctgaggcagagagcctttgccagaac
tggagaggatggaggaaacaatcagctgggcccaattcccccactgggggaaccaaggct
gctggatcaggaggtgcttcccccacacccaatgggctggtgatcccattggtggaactg
tctgcaaaacaggttgcatttcacattccatttgaggtggtggagaaagtttatcctcca
gtgcctgagcaactgcagcttcgaattgctttctggagtttcccagaaaatgaggaagat
atcagattgtactcatgtttggcaaatggcagcgcagatgaattccagcgaggggagcag
ctgtttcgggtgagggctgtcaaagaccctctgcagattggtttccatctgagtgccact
gtggtacccccacagatggtgccacccaaaggtgcatacaatgtggcagtgatgtttgac
cgatgcaggatcacctcgtgcagctgcacctgcggagctggagccaagtggtgtgctcac
gttgtggcactctgcctcttccggatacacaacgcatctgcagtatgcttaagagcaccg
gtttccgagtccttgtctcgactgcaaagagaccaattgcaaaaatttgctcaataccta
atcagtgaacttccacaacagattcttccaacagctcagcgcttgctggatgagttgtta
tcttctcagtctactgccatcaatacggtgtgcggagccccggatcccactgctggacct
tctgcatcagatcaaagcacctggtacttagatgaatctactctgagtgacaacataaag
aaaacccttcataaattctgtggaccctctcctgttgtgttcagtgatgtgaattcaatg
tatctttcttctacggagccaccagctgctgctgagtgggcctgtctcctgcgtcccctg
cgaggaagagaacctgaaggaatctggaacctgctttccattgtgcgggaaatgtttaag
agacgggatagtaatgcagctcctttgctggagattctgactgatcagtgtctcaactat
gagcagataactggctggtggtacagtgtgcgaacatctgcatcacacagcagtgctagt
gggcacacaggacgcagcaatgggcagtcagaagtagctgctcatgcctgtgcaagtatg
tgtgatgagatggtggttctttggaggctggctgtccttgacccaactattagtccacag
aggcacagagacctttgctcacagctcagacagtggcagctgaaagtcatagataatgtt
aagagaggtcagcacaagaagtcactggagaagctcttccagggtttcaagccagctgtg
gaagcctgttacttcaactgggaggaagcttatcccattcctgggatcacatacagcagc
agtgacaagaagaactcattctgttgggtaaaggccatccagcagaggagctgccggttg
cagtgtgcagaaactgcctgtgacgctggtagaacccatggacaggagcctggaggacca
tatctgcagcctggggacaggctgcgtccctccccccaggagccagcagttcgtccaaag
gaacttactggaaagcggaaggttgtctctgaaacaccacagagggttttgagacgactc
tcagcagaaggtgataaagctgtgtataagactgcagtaggcaaagcaaagttgccagtg
agcaagggcttgaccagtaaacatagtgggaaacgccgcatgagcagtgaagacagctct
ctggagccagacttggcagagatgagcctggatgacagcagcttggctttgggggcagaa
gccagcaacacgtttagttttacagaaagcccactgagcaggagctacagggacaccttt
gaggaggatggtggggtatacttctctgagggacctgagcctagtatcagaagcagttcc
atggccaagaaatcgcccaaggatcctgtgggggaaatgggtagtggtgatgatgacctg
ccttctgcagatgagaatagtggcggtgtgagcctgaagccagaagaagtgggagagaat
ggtgcagcaggtggaggggatgatggagaagaggaagacgattaccaggtatactatcta
aatccacaagaggtagccaaggaagatgatgacaaagctgaagggggaaatgaagaggag
caggatatatttgcaggtataaagcctctggagcaggagaaccggatggagatccttttt
gcctgtgcagaggccctgtatgcacatggatacagcaatgaagcatgctgcttaactgta
gagctcgccagggacctactggccaaccctccagacctcaaagtcgagcagccaccatct
aagggcaaaaagaacaaggtatcaaccagcaagcagacatggatggcaaccaacaccttg
tctaaagctgctttcttgctgactgtgttaagtgagcggctggagtatcacaacctggcc
ttccaaataggaatgtttgctctggagctgcagagaccacctgcctctacaaaggctctg
gaggtgaagctggcataccaggagtctgagattgcagccctcttgaagaagattcccttg
ggcactaatgagatgaacactattcgagggagagctgaagaactacgagaagggacgcta
tgtgattaccgtcctgtcctgcctctgatgttggctagcttcatatttgatgtcctgtgc
actccagtggtctctcctacgggctctagacccccaagccgtaattggaataatgaaatg
cctggagatgaagagcttggctttgaggcagctgttgctgctcttggcatgaaaacaact
gtcagtgaagcagaacatcctctgttgtgtgaaggcacccgaagggagaaaggggatctg
gcactagtcctgatgattacatacaaggatgatcagtctaagctgaagaagattttggac
aaactcctggacagagagagtcaaactcataaaccacagactctgagttccttttactca
tccagcaagccaacagtagcaaatcaaaaatctccctccaaacatgctgcccagtccact
gcagctatccagcagcttccagggacttctgtcacacagcaagcttctgtaagcactgca
gtccagagcagtcctgagaacttcgtggacaagagtgcacaggagagttctcagaggtca
ccctgtgagccagctacggaggccactgtcttgaaacaagagggaaaggtccccagtcgt
ctggcccttggaaaccgaggtggatacaatgggagatgctggggttcacctgtcaggcag
aagaagaaacacacaggcatggctagtattgacagcagtgctcctgaaaccacttctgac
agttctccaacactcagtcggcgtccgctacgtgggggttgggcaacaacatcctggggc
agaggacaggacagtgacagcatcagcagttcttcaagtgattcactgggatcttcctct
tccagtggcagtaggagagccagtgggggagcccgtgcaaagactgtggaagttggcagg
tataaaggaaggcggctggagagccatgctcctcatgtcccaaaccagccctcagaggca
gctgctcatttctactttgaattggccaagacagtccttatcaaagcaggtggaaacagc
agtacctccatcttcacccacccttcctccagtggtgggcaccagggaccacaccgcaac
cttcacctctgcgccttcgagattgggctgtatgcactagggctgcacaacttcgtgtct
cccaactggctctctcggacttactcctctcatgtctcttggatcacagggcaggccatg
gagattggtagtgcagccttgaatatcttggtggagtgttgggatggacatctgactccc
ccagaggtggcatcattggcagacagagcttcacgggccagggattccaacatggtgcgg
gcagctgctgaactggcactcagctgcctgccccatgcccatgccctgaacccaaatgag
atccagagggctctggtgcagtgtaaggaacaggacaatttgatgctggaaaaggcctgt
atggcagtagaagaggcagccaaaggaggtggcgtgtacccagaagtcctctttgaagta
gctcaccagtggtactggctttatgaacagactgttggtgggaccccagcccagagagaa
ggtgccactggctgcagtgccagtggtacacgggctgcttctgaagcagcacgtgggttg
acagacaaccgggtgacatctgagccaaccactgtaacagtggcagctgcggtaaccgcg
gcagcaaccgtcatgccggtaatctctgtggggtcaaccatgtaccagcagcacaccatg
gcggggccagcaatggcacatacacacacacagggccttcaccctaacacaacccttcag
actcacatcccctgtaatcctcagtatattggacacactatccagcacatgccacgccca
gctgtcttccccgtgcctggctcagcgtacccccagggtgtccatccagcattcatagga
gcacagtacccgtattcggtaacaacaccatcactggcagctacagcagtgtcgttccct
ggtgtgccagtcccatccatgacgcagattgcggtgcatccctatcacagtgagacagga
ctgtcactgtcttccaatgtagcaataggaagtgtccatgcaggatcaacgttcccagcg
attcaggggtcttccttgacaactttgtcctcacagcccaactcccttgttacagggggt
tttcctgccgaggatgagcagcacagtcagcctgtgagcccccagggtctgcactacctc
cactccgcataccgagttggcatgctggctctggagatgcttggccgaagagctcacaat
gaccatcccaacaacttctcgcgcagcccaccctacacagaggatgtaaagtggctcctt
gggttagctgcaaaattaggtgtaaactatgtgtatcagttttgcgttggtgcagccaag
ggggtgctgagcccttttgtgcttcaggagatcatcatggaagctctacagaggctcaac
cctgcccatgtgcacaaccacctgcgtaccccagccttccaccagctggtgcagaggtgc
cagcaggcctacatacagtatatccaccatcggctgatccatctcactccagcttactac
gatgactttgtgaatgccatccgcagcgccagaagcgccttctgcctgactcccatgggc
atgatgcagtttaatgatattctccagaacctaaagcgcagcaagcagacaaaggagctg
tggcaaagggtctctctggaaatgaccaccttctcgccgtga
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integrated database retrieval system
