Chaetura pelagica (chimney swift): 104391506
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Entry
104391506 CDS
T08631
Symbol
NFKB2
Name
(RefSeq) LOW QUALITY PROTEIN: nuclear factor NF-kappa-B p100 subunit
KO
K04469
nuclear factor of kappa light polypeptide gene enhancer in B-cells 2
Organism
cpea
Chaetura pelagica (chimney swift)
Pathway
cpea04010
MAPK signaling pathway
cpea04625
C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
cpea00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
104391506 (NFKB2)
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
104391506 (NFKB2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cpea03000
]
104391506 (NFKB2)
Transcription factors [BR:
cpea03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) Rel/Ankyrin
104391506 (NFKB2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RHD_DNA_bind
Ank_2
Ank
RHD_dimer
Ank_3
Ank_5
Ank_4
Death
Motif
Other DBs
NCBI-GeneID:
104391506
NCBI-ProteinID:
XP_009999123
LinkDB
All DBs
Position
Unknown
AA seq
910 aa
AA seq
DB search
MGADCLDGLDYDDFSFGPHMMEQKEPVMETVEGPYLVIIEQPKQRGFRFRYGCEGPSHGG
LPGASSEKGRKTYPTVKICNYNGMARIEVDLVTHSDPPRVHAHSLVGKQCNEAGNCIAIV
GPKDMTAQFSNLGVLHVTKKNMMEIMKEKLKQQKMRNRSHLLTEAELREIELEAKELKKV
MDLSIVRLRFTAYLRDSSGNFTLALQPVISDPIHDSKSPGASNLKISRMDKTAGSVRGGD
EVYLLCDKVQKDDIEVRFYEDDENGWQAFGDFSPTDVHKQYAIVFRTPPYHKPKIDRPVT
VFLQLKRKRGGDVSDSKQFTYYPVVEDKEEVERKRKKVLPQFPQHFGGGSHMGGAGGGAG
GFGSGGGGNLSXXXXXXXXPYSTGVAYNSIYSTGPHPVGGYQGGVQMKGSEAEGARSDRQ
AAVESTYCKELQQHAHLCQLWMLALARHNAHALLDYSVTADPRMLLAVQRDLAASQDENG
DTPLHLAIIHEQTAVIKQLIEVIVSIPNQQIINISNNLQQTPLHLAVITKQPQVVQLLLQ
ARADPTLLDRYGNSLLHLALQAGDDEMLKTLLAHLGSSAPYLLRLPSFHGLLPVHLAVKA
KSLSCLDLLVRKGADVNAVERQGGRTPLHLAVEMENLNMVTHLVKKLGADVNSRTFAGNT
PLHLAAGLGSPTLTKLLLKAGADMLCENDEPVSPSSSEASSDTDADPEEQELAMELGELA
PALEQGSDPQPPAQGHGQAGHRPRRCHTPLDLTQSQKVREILLQASQQDPAAELPTASQP
GKVLSLDSEALQGLVQRRNMSSEGSAKRLGLCSLVETYKDTPSPSVSLLRSYELAGGSLG
GLLEALDSMGLRKAVRMLHKTEALEKLQSTELKEDSAYGSESVEEEQGPTLALKPGPGSD
LPHSQQPQVH
NT seq
2733 nt
NT seq
+upstream
nt +downstream
nt
atgggggcagattgcctggatgggcttgactatgatgacttcagttttggccctcacatg
atggagcagaaggagcctgtgatggagacagtggaaggtccctaccttgtcattattgag
cagcctaagcagcgggggttccggtttcggtacggctgcgagggcccttcgcacgggggg
ctgccaggagcgtccagcgagaaggggcgcaagacctatcccactgtcaagatctgcaat
tacaatgggatggcccggatcgaggtagacctggtgacgcacagtgatcctccccgtgtg
catgcccacagcctggtggggaagcagtgcaacgaggctgggaactgcattgcaattgtg
ggacccaaggacatgacggctcagttcagcaacctgggtgtgctccatgtcaccaagaag
aacatgatggagataatgaaagaaaagctgaagcagcagaagatgcgcaacaggagccat
ctgctgacagaagcagagctgcgtgagatcgagctggaggcgaaggagctgaagaaggtg
atggacctgagcattgtgcggttgcgcttcaccgcctacctccgggacagcagcgggaac
ttcacgctggccctccagcctgtcatctcggaccccatccatgacagcaaatccccagga
gcttccaatctgaagatttcacggatggataagacagcaggctctgtaagaggaggggat
gaggtctacttactgtgtgataaagttcagaaagatgacatcgaggtgcgtttctatgag
gacgatgagaatggctggcaggcctttggggacttctctcccactgatgtacacaagcag
tatgccatcgtcttccgcacgcccccctaccacaagcccaagatcgaccgtcccgtcacc
gttttcctgcagctgaagcggaagcgggggggtgatgtgagcgactccaagcagttcacc
tactaccccgtggtggaagataaggaagaagtggagaggaagcgcaagaaagtcctgcct
cagtttccccagcactttggtgggggttcgcacatgggaggtgctggtgggggagctgga
ggctttggctctggaggaggcgggaacctcagcnnnnnnnnnnnnnnnnnnnnnnntccc
tactctactggggtggcctacaacagcatctactcaactggcccccaccccgtggggggc
taccaagggggtgtacagatgaagggctctgaggcagagggggctaggagtgacaggcag
gcagctgtggagagcacatactgcaaggagctgcagcagcacgcccatctctgccagctg
tggatgctggcgctggcccgtcacaacgcccatgccctgctggactactcggtcactgct
gacccccgcatgctgctggcagtccagagggacctggctgcatcacaggatgagaacgga
gacacgcctttgcaccttgctattatccatgagcagacggctgtgatcaagcagctgatc
gaggtcatcgttagcatccccaaccagcagatcatcaacatctccaacaacctgcagcag
acaccactgcatctggcagtcatcaccaagcagccccaagtagtccagctcctgctgcaa
gcccgtgccgaccccaccttgttggaccgctatggcaattccctgctgcacctggcactc
caggctggtgacgatgagatgctgaagacactgctggcccacctgggctcatccgcccct
tacctgctccgcctgcccagcttccacggcctcctgcctgtacacttggctgtgaaggca
aagagtttgtcgtgcctggacctgctggttaggaaaggagccgatgtgaacgcggtggag
aggcagggtgggaggaccccgctgcacctggctgtggagatggagaacctgaacatggtc
acccatctggtgaagaagctgggagcagatgtcaacagccggacctttgctgggaacacc
cccctgcacctggctgctggcctgggctctcctaccctcaccaaactgcttctcaaagct
ggggcagacatgctgtgtgagaatgacgagcctgtcagcccctcctcgtcagaagccagc
agtgacacagatgccgaccccgaagagcaggagctggcaatggagttgggggagctggcc
ccagccttggagcaaggcagcgacccccagccccctgcgcaggggcacgggcaggcgggg
cacagaccgcgccgctgccacacgcccctggacctgactcagagccagaaggtgcgggag
atcctgctgcaggcctctcagcaggaccccgcagcagaactgcccactgcctcacagcca
gggaaggtcttgtcgctggacagtgaggcactgcaggggctggtgcagcgccggaacatg
agctcagaggggtcggccaagcgcctggggctctgcagcctagtggagacctacaaggac
accccctcacccagtgtcagcctactgcgcagttacgagctggcagggggcagcctggga
gggctgctggaggcactggactccatggggctccgcaaggccgtcaggatgctccacaaa
accgaggcgctggagaagctgcaaagtacagagctgaaggaagacagtgcctatggcagc
gagtccgtggaagaggagcagggacccacgttggccctgaagccagggccagggagtgac
ctgccccacagccagcagccacaggtgcactga
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