Chaetura pelagica (chimney swift): 104391546
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Entry
104391546 CDS
T08631
Symbol
TRERF1
Name
(RefSeq) transcriptional-regulating factor 1 isoform X1
KO
K26583
transcriptional-regulating factor 1
Organism
cpea
Chaetura pelagica (chimney swift)
Brite
KEGG Orthology (KO) [BR:
cpea00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cpea03036
]
104391546 (TRERF1)
Chromosome and associated proteins [BR:
cpea03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
MiDAC complex
104391546 (TRERF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C2H2_6
ELM2
zf-C2H2_4
zf-C2H2
Myb_DNA-binding
zf-met
Myb_DNA-bind_7
Zn_SUZ12
Myb_DNA-bind_6
zf-C2H2_2
Motif
Other DBs
NCBI-GeneID:
104391546
NCBI-ProteinID:
XP_009999172
LinkDB
All DBs
Position
Unknown
AA seq
1175 aa
AA seq
DB search
MGDQQLYKTNHTANSNENLYYQQHQMNSLSSLNHSFGTSVMDAPQASPLSPQFPQDSRDS
IALPVGSKSLGSVDTSRQTSWTHSGSGNHIPVRNNLNNQSSMWSPLGQGESHDGYQYSYS
QPSENRSQKITSGVLHKLDSFTQVFANQNLRIQVNNMAQVLHTESSMVDNSGDSALRQLL
SQKPAVEQQPVTPSVQRYQPVPQQTHQNFASTQQKQQMQVMQHQQLYYDYQQHLSQMQMH
SAFQQGAAHVQPQQLLPQQMQHLQQPQYYAQPQQGHQRLSLQEGQQEQHPAPPXXXXXXX
XXXXXXRQCPMQIAQYYQAQPVVQQLQQQQQQMQLPLTPYHREPDPKTMLEPHQYSQDPS
HPVQLIQLGSVPQYCYQDPHEQYRHLYPQSLLQQQQQEQQKQYPSESRAPSLNSHLGLTP
PETTEDPARQEVNSVGNAVPHRTLLPPSGVHLNNRSSQQDSPSATWPQVQLSDGRLQPLS
PEQSGQNKETLPERADAKNKLMCSICLKEFKSLPALNGHMRSHGGVRASPNFKQDEGEKP
PPQQPLPKEVDSLAPIVMPVSVPVKLLSPEPSMQPSASTATAKDKPANSVSDDEMPILVK
MTYSPPCSPKVANPCSSSEISKKTHPSAVKLEENFKPLQDKKKYRHRPEPLFIPPPSFNF
SMSHSGATLYQSQLRSPRVLGDHLLDRAHELPPYTPPPMLSPVRQGSGLFSSVITSSHST
SHTQLPLTPLTPTPRVLLCRSNSIDGSVIPMTPGPGEQTVEPRINIGSRFQADIPDLQDR
LLMEKDVHKATLVWKPWPELENQVFQQRVEDLLNMSCSSVLPGGGTNSEYALHSLFEAKG
DIMVALEKLLLRKPVRLKCHPLANYHYAGSDKWTHQERRLFKEALSTYSKDFIFVQKMVK
SKTVAQCVEYYYTWKKILRLGRKHRTRLEKKREECLTSGEEEVLEEDEEIEDDRKEEREM
QKSPDPPAIPLVGPIDLPAFQSLSLSSSSFICEMPNCGAVFSSRQALNGHARIHGGTNQV
TKTRCTMPGTKQKSGTQSGYCSIKSSPAHSTTSGETDPTTIFPCKECGKVFFKIKSRNAH
MKTHRQQEEQQRQKAQKAAVAAEMAATIARTTGPVGRSLIPLDHMGLVKHVENVSDVDGD
VVQELGDVMEENEVMDADLLLDDEDADLLQDDAEL
NT seq
3528 nt
NT seq
+upstream
nt +downstream
nt
atgggggaccagcaattgtataaaactaaccatactgccaacagcaatgagaacttgtac
taccaacagcaccaaatgaactccctttcatctctaaatcatagcttcgggacgtctgtt
atggatgctccccaggcgtcccctctctcgccccagtttccccaagattcaagggacagc
atagctttgcctgtaggttcgaaaagtcttgggtcagtggatacatctaggcagaccagt
tggacacattctggctcaggaaaccacatccctgtgaggaacaatttgaataatcaaagc
tcaatgtggagcccccttgggcagggggaatcccacgatggataccaatattcttactct
caacccagtgaaaatcgatcgcaaaaaattaccagtggagtcctgcacaaactggactcc
tttacgcaagtatttgcaaaccaaaatctgagaattcaagtaaacaacatggctcaggtt
ttgcacacggagtcttcgatggtggataattctggtgacagtgcgctcaggcagctgctg
tcccagaagccagcggttgagcaacagcccgtaactcccagtgtacaaagataccaacca
gtgccacagcaaacacaccagaattttgcaagcacacagcaaaagcaacaaatgcaagtc
atgcagcaccaacagctgtactacgactaccagcagcatttatcgcaaatgcagatgcac
tctgccttccagcaaggagcggcgcacgttcagccccagcagctcctgccccagcagatg
cagcacctgcagcagccccagtactacgcccagccgcagcaggggcaccagcggctctcg
ctgcaggaggggcagcaggagcagcaccccgccccgccnnnnnnnnnnnnnnnnnnnnnn
nnnnnnnnnnnnnnnnngcggcagtgccccatgcagatcgctcagtattaccaggcgcag
cctgttgtgcaacagttgcagcagcagcagcagcagatgcaattgccgcttactccgtat
cacagggaacctgatccaaagactatgcttgagccacaccagtactctcaagatccaagt
catcctgtccagcttatccagttgggatcggtgcctcagtattgctaccaagatccccac
gagcagtacaggcacttatacccacagagtttactgcagcagcagcagcaagagcaacaa
aagcaatacccaagtgagagcagggcaccatctctgaactcccacctcggcctcactcca
ccagagaccactgaggatcccgcacggcaggaggtgaattctgtaggtaatgctgtccct
catcgaactcttttgccaccctcgggagttcatctgaacaacagaagctctcagcaagac
tctcccagtgccacatggcctcaggtgcaactgtcagatggcagactgcagcctctgtcc
ccagaacaaagtggccagaacaaagaaacacttcctgagagagctgatgcaaagaacaag
ctaatgtgttcaatatgcttgaaggagtttaagagtttgcctgctctaaatggtcacatg
aggtcacatggaggagtaagagcatctcctaacttcaaacaggatgaaggagagaaacca
ccaccacagcagccgctgcctaaagaggtggatagcctcgcgcccatcgtcatgccagtg
tctgtccctgtaaagcttctgtcacctgagcccagcatgcagccctctgccagcactgcc
acagccaaagacaagcctgccaactctgtgtcagatgatgagatgcccattcttgtgaag
atgacttactctccaccgtgcagtccaaaagtggccaacccctgctcatcctctgaaatt
agcaaaaaaactcatccaagtgctgtaaaattggaagaaaacttcaaaccgttgcaggac
aagaagaagtatcggcacaggcccgaacctctcttcatacctcctccttccttcaacttc
agcatgtcccactccggcgccaccctgtaccagagtcagcttcgctctccccgtgtcctt
ggagaccatctgctggaccgagcgcacgagcttcccccctacactccgccgccgatgctt
agtcccgttcggcaagggtctggcctcttcagcagtgttatcacatcctctcacagcacc
tcgcacactcagctgccacttactccactgacacccactccacgggtgctcctgtgtcgg
tctaatagtattgatggaagtgtcattcccatgacgcctgggcctggagaacagactgtt
gaaccacgaattaatatcggatccaggtttcaggctgatattcctgacctgcaggacaga
ttgctaatggagaaagatgtgcacaaagctactttggtttggaaaccatggccagaactg
gaaaaccaagtcttccagcaaagagtggaagaccttttaaatatgagctgttccagtgtg
ttacctggtggaggcactaactcagaatacgctttgcactctctctttgaggcgaaagga
gatattatggttgctcttgagaagctgctgttgagaaagccagtgaggttgaagtgtcat
cctttggcgaattaccactatgctggatctgacaaatggacgcatcaagaaaggaggctg
ttcaaagaggcattatccacctacagcaaagatttcatatttgtacagaaaatggtgaag
tctaagacggttgcacaatgtgtggaatactactatacctggaagaaaatcttgcgtttg
ggacggaaacacagaacacgtttagagaagaaaagagaggaatgtctgacaagtggagaa
gaggaagtgttagaggaagatgaggagatcgaagatgatagaaaggaagaaagagaaatg
cagaagtctcctgacccaccagctatccctcttgttggacctatagatctgcctgccttt
cagagtctttcactttcttcatcctccttcatctgtgaaatgccgaactgtggcgctgtt
ttcagttcccgacaagcgctcaatggccacgctcgcattcacgggggtacgaaccaggtg
accaagacacgatgcaccatgccaggcactaagcagaaatctggtacgcagagtgggtac
tgctccatcaagagttcaccggcccacagcacaacaagtggtgagaccgacccaacaaca
atttttccgtgcaaggagtgtggcaaggtgtttttcaaaatcaaaagtcgcaatgcacat
atgaagactcacagacaacaagaagagcagcaaaggcagaaggctcagaaagctgctgta
gcagcagaaatggcagccactattgcgagaactactgggccagtcgggcgtagtttgatc
cctctggatcacatgggtttggttaaacatgttgagaatgtcagtgacgttgatggtgat
gttgttcaggagctgggtgatgtcatggaagagaatgaagtcatggatgctgaccttctt
ttggatgatgaagatgcagatctactgcaggatgatgctgagttgtaa
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integrated database retrieval system
