Chaetura pelagica (chimney swift): 104391704
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Entry
104391704 CDS
T08631
Symbol
SPOP
Name
(RefSeq) speckle-type POZ protein
KO
K10523
speckle-type POZ protein
Organism
cpea
Chaetura pelagica (chimney swift)
Pathway
cpea04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
cpea00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
104391704 (SPOP)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cpea04121
]
104391704 (SPOP)
Ubiquitin system [BR:
cpea04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul3 complex
Adoptor and target recognizing subunit (BTB)
104391704 (SPOP)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MATH_2
BTB
BACK_BPM_SPOP
MATH
BACK
BTB_KLHL33
Motif
Other DBs
NCBI-GeneID:
104391704
NCBI-ProteinID:
XP_009999334
UniProt:
A0A093BN42
LinkDB
All DBs
Position
Unknown
AA seq
374 aa
AA seq
DB search
MSRVPSPPPPAEMSSGPVAESWCYTQIKVVKFSYMWTINNFSFCREEMGEVIKSSTFSSG
ANDKLKWCLRVNPKGLDEESKDYLSLYLLLVSCPKSEVRAKFKFSILNAKGEETKAMESQ
RAYRFVQGKDWGFKKFIRRDFLLDEANGLLPDDKLTLFCEVSVVQDSVNISGQNTMNMVK
VPECRLADELGGLWENSRFTDCCLCVAGQEFQGHKAILAARSPVFSAMFEHEMEESKKNR
VEINDVEPEVFKEMMCFIYTGKAPNLDKMADDLLAAADKYALERLKVMCEDALCSNLSVE
NAAEILILADLHSADQLKTQAVDFINYHASDVMETSGWKSMVVSHPHLVAEAYRSLASAQ
CPFLGPPRKRLKQS
NT seq
1125 nt
NT seq
+upstream
nt +downstream
nt
atgtcaagggtgccgagtcctcctcccccggcagaaatgtcgagtggacctgtagcagag
agctggtgctacacccagatcaaggtggtgaagttttcgtacatgtggaccataaacaac
ttcagcttctgccgagaagaaatgggtgaggtcatcaagagctcaaccttttcatctgga
gccaatgataaactcaaatggtgtttacgtgtcaaccccaaaggcttggatgaagaaagt
aaagattatctgtccctctacctgctgctggtgagctgtccaaaaagtgaagttcgagcc
aagttcaaattctccatcctgaatgcaaaaggagaagaaacaaaagcaatggagagccag
agagcctatcgattcgtgcaaggcaaggactggggcttcaaaaaattcattagaagagac
ttccttttggatgaggccaatggacttcttccagatgacaaactcactctcttctgtgag
gtgagtgtggtacaggactcggtcaatatctccggccagaacacgatgaacatggtgaag
gtcccggagtgtcgcttggcggatgagctgggagggctctgggagaactcgcgcttcacc
gactgctgcctgtgcgtggcaggccaggagttccagggccacaaagccatcctggcagcg
cgttccccggttttcagcgccatgtttgagcatgagatggaagagagtaaaaagaatcgg
gtcgaaatcaatgatgtggagcctgaagtctttaaggaaatgatgtgctttatttacacg
gggaaggcaccaaatcttgacaaaatggctgatgacttgctggcagctgctgacaagtac
gccctggagcggctgaaggtgatgtgtgaggatgcactgtgcagtaacctgtctgtggaa
aatgcagctgaaatcctcattctggctgacctacatagtgctgatcaactgaaaactcaa
gcagtggacttcattaactatcatgcttctgatgtgatggagacctcaggctggaagtcc
atggtggtgtcacatccccacttggtggccgaggcgtatcgctctctggcctctgcacag
tgtccctttctgggccccccacggaagcgactgaagcaatcctaa
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