Chaetura pelagica (chimney swift): 104391869
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Entry
104391869 CDS
T08631
Symbol
IRF1
Name
(RefSeq) interferon regulatory factor 1
KO
K09444
interferon regulatory factor 1
Organism
cpea
Chaetura pelagica (chimney swift)
Pathway
cpea04625
C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
cpea00001
]
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
104391869 (IRF1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cpea03000
]
104391869 (IRF1)
Transcription factors [BR:
cpea03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters interferon-regulating factors
104391869 (IRF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
IRF
Motif
Other DBs
NCBI-GeneID:
104391869
NCBI-ProteinID:
XP_009999519
LinkDB
All DBs
Position
Unknown
AA seq
322 aa
AA seq
DB search
MPVSRMRMRPWLEMQINSNQIPGLIWINKDKMIFQIPWKHAAKHGWDMEKDACLFRSWAI
HTGRYKVGEKDPDPKTWKANFRCAMNSLPDIEEVKDKSINKGSSAVRVYRMLPPLTKDQK
KERKSKSSREARSRSKRKSYEDMKTEESTERLTNTPLPDDHSGYTIHDYTGQEVEAESPS
ITLDLSLCEVGSSLTGALTDWRPSMEITSADSTNDLYQFQVSPLASSSEVTDEDEEEINS
EILKLLEPAQDWHTTSVGGKGFLTNEPGSQSMGSTYSCKEQDGEIDTTSGELELRLFDQK
SSLEFSWLDMMRPSIQVVSCGL
NT seq
969 nt
NT seq
+upstream
nt +downstream
nt
atgcccgtgtccaggatgcgcatgaggccctggctggaaatgcagattaactccaatcaa
ataccaggactgatctggattaacaaggataagatgatttttcaaatcccatggaaacat
gcagctaagcatggctgggacatggagaaagatgcctgccttttccggagctgggccatc
catacagggaggtacaaagtaggtgagaaagaccctgacccgaaaacctggaaggcaaat
ttccgctgtgctatgaattccctgcctgacatcgaggaggtgaaggataaaagcatcaac
aaaggctccagtgctgtcagggtgtacaggatgctgccacccttgacaaaggaccagaag
aaggaaaggaagtcgaagtcatcgagagaagcaagaagcaggagcaagaggaagtcatac
gaggacatgaagacagaggagtcaacggaaagactaaccaacactcccctgccagatgac
cacagtggctacaccattcatgactacacagggcaggaagtggaggctgagagcccgtcc
atcaccttagacctgtccctgtgcgaggtgggcagctcgctgacgggcgctctgaccgac
tggaggccatccatggagatcacctcagctgacagcaccaatgacctctaccagttccaa
gtgtctcccttggcttcatcctcagaagtcacagatgaagatgaagaggaaattaattca
gagattcttaagctgctggagcctgcccaggactggcacaccaccagtgttgggggcaaa
ggcttcctcaccaacgagccaggctcacagagcatgggcagcacctacagctgcaaggag
caggacggggagatcgacaccacttcaggagagctggagctcaggctctttgaccagaaa
agcagcctagaattctcctggctggacatgatgagacccagcattcaagttgtctcctgt
ggcctgtaa
DBGET
integrated database retrieval system