Chaetura pelagica (chimney swift): 104391902
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Entry
104391902 CDS
T08631
Symbol
SLIT2
Name
(RefSeq) slit homolog 2 protein
KO
K06839
slit 2
Organism
cpea
Chaetura pelagica (chimney swift)
Brite
KEGG Orthology (KO) [BR:
cpea00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
cpea00536
]
104391902 (SLIT2)
Glycosaminoglycan binding proteins [BR:
cpea00536
]
Heparan sulfate / Heparin
Axon guidance molecules
104391902 (SLIT2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
EGF
Laminin_G_1
Laminin_G_2
LRR_9
LRRNT
LRRCT
LRR_1
EGF_TEN
hEGF
LRR_14
EGF_DL_JAG
EGF_3
EGF_Teneurin
Motif
Other DBs
NCBI-GeneID:
104391902
NCBI-ProteinID:
XP_009999553
LinkDB
All DBs
Position
Unknown
AA seq
1538 aa
AA seq
DB search
MSDRRPHPQTVSKDIGSSPLKEFGAQRESFNVLGVIGIEGSLQLDPKNLVKKRHITPGEK
VVLKYEQKWDLNGNNITRITKTDFAGLRHLRVLQLMENKISTIERGAFQDLKELERLRLN
RNNLQLLSELLFLGTPKLYRLDLSENQIQAIPRKAFRGAVDIKNLQLDYNQISCIEDGAF
RALRDLEVLTLNNNNITRLSVASFNHMPKLRTFRLHSNNLYCDCHLAWLSDWLRQRPRVG
LYTQCMGPSHLRGHNVAEVQKREFVCSGHQSFMAPSCSVLHCPTACTCSNNIVDCRGKGL
TEIPTNLPETITEIRLEQNSIKVIPPGAFSPYKKLRRIDLSNNQISEAAPDAFQGLRSLN
SLVLYGNKITELPKGLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTI
AKGTFSPLRAIQTLHLAQNPFICDCHLKWLADYLHTNPIETSGARCTSPRRLANKRIGQI
KSKKFRCSAKEQYFIPGTEDYRSKLSGDCFADLACPEKCRCEGTTVDCSNQKLNKIPDHI
PQYTAELRLNNNEFSVLEATGIFKKLPQLRKINLSNNKITDIEEGAFDGASGVNELLLTS
NRLESVRHKMFKGLESLKTLMLRSNRVSCVGNDSFTGLSSVRLLSLYDNQITTVAPGSFD
TLHSLSTLNLLANPFNCNCHLAWLGDWLRKKRIVTGNPRCQKPYFLKEIPIQDVAIQDFT
CDDGNDDNSCSPLSRCPAECTCLDTVVRCSNKGLKALPKGIPKDVTELYLDGNQFTLVPK
ELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNRLRCIPARTFDGLKSLRLLS
LHGNDISVVPEGAFNDLSALSHLAIGANPLYCDCNMQWLSDWVKSEYKEPGIARCAGPGE
MADKLLLTTPSKKFTCQGPVDVNILAKCNPCLSNPCKNDGTCNNDPVDFYRCTCPYGFKG
QDCDIPIHACISNPCHHGGTCHLKEGEKDGFWCTCADGFEGENCEVNVDDCEDNDCENNS
TCVDGINNYTCLCPPEYTGELCEEKLDFCAQNLNPCQHDSKCILTPKGYKCDCTPGYVGE
HCDIDFDDCQDNKCKNGAQCTDAVNGYTCICPEGYSGLFCEFSPPMVLPRTSPCDNYECQ
NGAQCIIKESEPICQCLSGYQGEKCEKLISINFVNKESYLQIPSAKIHPQTNITLQIATD
EDSGILLYKGDKDHIAVELYRGRVRVSYDTGSYPASAIYSVETINDGNFHIVELLAMDQI
LSLSIDGGSPKIITNLSKQSTLNFDSPLYVGGMPVKNNIAALRQSPGQNGTSFHGCIRNL
YINSELQDFRNVPLQVGILPGCEPCHKKVCVHGTCHATSQSGFSCECEGGWTGPLCDQQT
NDPCLGNKCVHGTCLPINAFSYSCKCLQGHGGVLCDEEEMLFNPCQSIRCKHGKCRLSGL
GKPYCECSSGYTGDSCDKEISCRGERVRDYYQKQQGYAACQTTKKVSRLECKGGCLGGQC
CGPLRSKRRKYSFECTDGASFVEEVEKVVKCGCTNCPS
NT seq
4617 nt
NT seq
+upstream
nt +downstream
nt
atgtctgacagaaggcctcatcctcagacagtttcgaaagacattgggagttctcccctt
aaagagtttggagcacaaagagaaagtttcaatgtgctgggagtgattggaattgaggga
agtttacaacttgaccccaaaaatcttgtgaaaaagaggcatattactccaggagagaag
gtagtgctgaagtatgaacagaaatgggatcttaatgggaacaacatcacaagaatcacc
aagactgactttgctggtctaaggcatcttcgagttcttcagctcatggagaacaagatc
agtactattgagagaggagcattccaggatttaaaagaactggagaggctgcgcctaaac
agaaataaccttcagttgctttctgagctgctctttctggggacgccgaagttatacagg
cttgatcttagtgaaaatcagattcaagcaataccaaggaaagcattccgaggagcggta
gacataaaaaatctgcaactggattacaaccagatcagctgtattgaagatggagcattt
agggctctgcgcgacctggaagtgctcactctcaacaataataacattacccgactgtct
gtggcaagtttcaaccatatgcccaaactcaggacatttcgtcttcactcaaacaacctc
tactgtgactgccacctggcctggctgtctgactggctgcggcagcgcccacgggttggc
ctctacacccagtgcatggggccatcccacctccggggacacaacgtagccgaggtccaa
aagcgggagtttgtctgcagcggtcaccagtccttcatggctccatcctgcagtgtcttg
cattgccctaccgcatgcacctgtagtaacaacattgtggactgccgtggaaaaggcctg
actgagatcccaacaaacctcccagaaaccattactgaaatacgattagaacaaaattca
atcaaggtcatacctcctggagctttctcaccatataaaaagcttcgaagaattgacctg
agcaataaccagatctctgaagcagctccagatgctttccagggcttacgttcactcaat
tcacttgtcctctatggcaataaaattacagaactcccaaagggcctatttgaaggactc
ttttctctacagttactattactgaatgctaacaagatcaattgcctgcgagttgatgct
tttcaagatctgcacaacttgaatcttctttctttgtatgacaacaagcttcagaccatt
gcaaaaggcaccttctcacccctacgtgcaatccagaccttgcatttggctcagaaccca
tttatctgtgactgccatctgaagtggctggcggattatcttcatacaaaccccatagag
accagtggtgcccgttgcaccagcccccgccgtctggcgaacaaaaggatcggccagatc
aaaagcaagaaattccgctgctcagctaaagaacagtatttcattccaggcactgaagat
tacagatccaaattaagtggagactgctttgcagatttggcttgccctgagaaatgtcgc
tgtgaagggaccacagtggactgctccaatcagaaactcaacaaaattcctgatcacatc
cctcagtacacagcagagttgcgattaaataataatgaattttcagtcctggaagctact
ggaatctttaagaaacttcctcagctgcgtaaaataaacctgagcaataacaagattact
gatattgaagagggagcatttgatggagcctctggtgtgaacgaactcttgctcactagc
aaccgcttggagagtgttcgacacaaaatgttcaaaggactagaaagtcttaaaacactg
atgctgaggagcaaccgtgtgagctgtgtgggaaatgacagcttcactggcctgagttcc
gtccgcctgctctcgctgtatgacaaccagatcaccaccgtggcaccaggctccttcgac
actctgcattcgctttctaccctaaatctcttggccaatcccttcaactgcaactgccat
cttgcatggcttggagactggctaaggaagaagcgtattgtgacagggaaccctcgttgt
caaaaaccctacttcctcaaagagattcctatccaggatgtggcaattcaggattttaca
tgtgatgatgggaatgatgacaatagctgctctccactctcccgctgtcctgcagaatgc
acttgtctagacacagtagttcgctgcagcaacaaaggcctaaaagctttgcccaaaggc
atcccaaaagatgtaactgaactttacttggatggaaatcagtttacccttgttccaaaa
gagctttccaactacaagcatctaacactcatagatttaagtaacaacagaatcagcact
ctttctaatcagagcttcagcaacatgactcagctgcttaccttaattcttagttacaac
cgcctgaggtgtatccctgcacggacttttgatgggttgaaatcactgaggttgttgtct
ttacatggaaatgatatttctgttgttcctgaaggagcttttaatgatctttctgcttta
tcacacctggctattggagcaaatcctctttattgtgattgtaacatgcagtggctatct
gactgggtaaaatcagaatacaaagagcctggtattgcacgttgtgctggtcctggagaa
atggcagataaacttcttctcacaactccttctaaaaaatttacatgccaagggcctgtg
gatgttaatattcttgctaagtgtaacccctgtttatcaaatccatgtaaaaatgatgga
acctgcaataatgatccagttgacttctacagatgcacttgcccatacggtttcaagggt
caagactgtgatattcccattcatgcctgcattagtaatccctgccaccatggtggaact
tgtcatttgaaagaaggagaaaaagatggtttctggtgcacttgtgcagatggatttgaa
ggtgaaaactgtgaagtaaatgttgatgactgtgaagacaatgactgtgagaacaattct
acttgcgtggatggaattaataactatacttgcctttgtccacctgaatatacaggtgag
ctctgtgaagagaagctagatttctgtgctcaaaacctgaatccttgccagcatgactca
aagtgtatcttgacacccaaaggatacaaatgtgattgcacacctggatatgtaggtgag
cattgtgatattgactttgatgactgccaggacaacaaatgtaaaaacggagcccagtgt
actgatgcagttaatggatatacatgtatttgcccagaaggatacagtggcttattctgt
gaattttcaccaccaatggttctaccccgcaccagcccttgtgataattatgaatgtcaa
aatggagcccaatgtatcattaaagagagtgaaccaatctgtcagtgtttatcaggctac
cagggtgagaaatgtgaaaagctgatcagtataaactttgtcaacaaagaatcctatcta
caaatcccctcagctaagatacaccctcaaaccaatatcactctacagattgccacagat
gaagacagtggaatcctgctctacaaaggtgataaagatcatatagcggtagagctgtac
cggggtagagtgagagtcagttatgacacaggatcttatccagcctctgctatttacagt
gtggaaactattaatgatggcaatttccacattgtggagctgctagctatggatcagatt
ctgtctttatctattgatggaggaagccccaagataataaccaatttgtccaagcaatcc
actctgaattttgattctccgctatatgtaggaggcatgcctgtgaaaaataacatagca
gctttacgccagtctccaggacagaatggcaccagcttccatggttgcatccgtaatctg
tacatcaacagtgaactccaggacttcagaaatgtgccactgcaagtgggaattctgcca
ggttgtgagccttgtcataagaaagtttgtgtgcatggaacgtgccatgctaccagccag
tcaggcttttcctgtgagtgcgaaggaggatggactgggcccctctgtgatcaacaaact
aacgacccatgtcttggaaataaatgtgtgcatggtacctgcttgccgatcaatgcattt
tcatacagttgtaaatgcctgcagggacatgggggagtcctctgtgatgaagaggaaatg
ctgtttaacccctgccaatccatcaggtgtaaacatggcaaatgcaggctttcgggactt
gggaaaccatattgcgaatgcagcagcggatacacgggggacagctgtgataaagaaatc
tcttgtcgaggggaacgagtccgagattactaccaaaagcagcaaggatatgctgcgtgc
cagacgaccaagaaggtatcgagactagaatgcaaaggaggctgcttgggcgggcagtgc
tgcgggccgctgcgcagcaagaggcggaaatactcctttgagtgcactgacggggcctca
tttgtggaagaggttgaaaaagtggtgaagtgtggctgtaccaattgtccctcctaa
DBGET
integrated database retrieval system