Chaetura pelagica (chimney swift): 104391914
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Entry
104391914 CDS
T08631
Symbol
OPTN
Name
(RefSeq) optineurin
KO
K19946
optineurin
Organism
cpea
Chaetura pelagica (chimney swift)
Pathway
cpea04137
Mitophagy - animal
cpea04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
cpea00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
104391914 (OPTN)
04137 Mitophagy - animal
104391914 (OPTN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cpea04131
]
104391914 (OPTN)
Membrane trafficking [BR:
cpea04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
104391914 (OPTN)
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
104391914 (OPTN)
Autophagy
Mitophagy
PINK1-Parkin associated proteins
104391914 (OPTN)
Xenophagy
Cargo receptors
104391914 (OPTN)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CC2-LZ
NEMO
zf_C2H2_10
DUF6439
Zn_ribbon_3
EDR4-like_1st
zf-C2H2
Motif
Other DBs
NCBI-GeneID:
104391914
NCBI-ProteinID:
XP_009999567
LinkDB
All DBs
Position
Unknown
AA seq
556 aa
AA seq
DB search
MSSKLKNRTAENGEHPRSNMANGTDSLAAPTLSTYTPEEMVQQMKELITENNELKEAMKV
HNQAMKDRYEELSIWREKQKEEREFYELKFKEAKQCLLAKCIENEQLQQQLQSLKGREGA
EMEGCGALEKEAKQLKCQVQRLQAEKADLLAIISELQVKLNISSAEDSFVEIGMNEEITR
TAKEHQENSDEMTSNMSMYMRNKPADESKNLESEELTVSQLLCSLRNETQKREKLEKELQ
DTKERLSKLEKETTSCLEGGTQTEQQEEETSEAVGSEVEALNLQVCALFKELQEAHEKLK
EAELIQKKLQEKCQVLERKSSAAASELEENQQLIYSIRKLELQVESMQAEVKLEQAKTHE
EKARYNSLQDAYSKLLPEVNEARKTIDEMKLKELNRVDKVVVEQLNAKVELAEQALAAKQ
LQIDEMKQIIAKQEEDLETMAVLRAQMEVYCSDFHAERAAREKIHEEKEQLAVQLAYLLK
EQQNLEELSRNSLAEMQNRHGARASDREHSPRLVQRGTGGQDWPEQRNISMYSCPKCGEI
LPDLDTLQIHVMDCIN
NT seq
1671 nt
NT seq
+upstream
nt +downstream
nt
atgtccagcaagttgaagaaccgaactgcagaaaatggagagcatcccaggagcaacatg
gcaaatggaacagacagcctggctgcccccaccctcagcacctacaccccagaggagatg
gtacaacagatgaaagaactgatcactgagaacaatgagttaaaagaagccatgaaggtg
cataaccaagctatgaaggaccgatacgaggaactttccatctggcgagagaagcagaaa
gaagaacgagaattttatgaattgaagttcaaggaagctaagcagtgcttgctagccaag
tgcattgaaaatgaacaactacagcaacaacttcagagcttaaagggaagagaaggagct
gaaatggagggctgtggggctctggagaaggaagcaaagcagctgaaatgccaggtgcag
cggctccaggctgagaaggcagatctgctagccatcatttcagagctgcaggtcaagctc
aacatctcatcagcagaggattcctttgtggagattgggatgaacgaagaaataactaga
actgcaaaggaacatcaagagaatagtgatgaaatgaccagtaacatgtctatgtacatg
agaaacaaacctgcagatgaatcgaagaatttggagtctgaggagctaactgtgagtcag
ctgctctgcagccttagaaatgaaactcagaagagggaaaaacttgagaaggagctgcag
gataccaaagagagactgtcaaagctagagaaggagaccaccagctgcctggagggtggg
acacaaactgaacagcaagaggaggaaacttcagaggctgttggcagtgaagtagaagcc
ctgaatttgcaagtttgtgctctgtttaaagagcttcaggaagctcatgagaagttaaaa
gaagcagaattgattcagaagaagcttcaagaaaagtgccaggtactggaaagaaaaagc
tcagctgctgcatcagaattggaggagaaccagcagctaatatacagcatcaggaagttg
gaacttcaggtagagagcatgcaggcagaagtcaagctggaacaagccaagacacatgaa
gaaaaggcaagatataatagcttgcaggatgcatacagcaaactccttcctgaagtaaat
gaggcaaggaaaacaatcgatgaaatgaaactcaaagagctcaacagagtggataaagtc
gtggtggaacaactgaacgcaaaggtggagctggcagaacaagcccttgcagcaaagcag
ctccagatagatgaaatgaagcagatcattgctaagcaagaggaagacctcgaaaccatg
gctgtgctccgtgctcagatggaggtttactgttctgatttccatgctgagagggcagca
agagagaagatccatgaggagaaggagcagctggctgtccagctggcatacctgctaaaa
gagcagcaaaaccttgaagaacttagccggaactctttggcagagatgcagaatcgccac
ggagccagggcatcagatcgggaacactcgcctcgccttgtccaaagaggaactggtggc
caagactggccagaacagcggaatatctcaatgtattcatgtcccaaatgtggagaaatt
ctacctgatttggacacgctgcagatccatgttatggactgcattaattga
DBGET
integrated database retrieval system