KEGG   Chaetura pelagica (chimney swift): 104391914
Entry
104391914         CDS       T08631                                 
Symbol
OPTN
Name
(RefSeq) optineurin
  KO
K19946  optineurin
Organism
cpea  Chaetura pelagica (chimney swift)
Pathway
cpea04137  Mitophagy - animal
cpea04140  Autophagy - animal
Brite
KEGG Orthology (KO) [BR:cpea00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    104391914 (OPTN)
   04137 Mitophagy - animal
    104391914 (OPTN)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:cpea04131]
    104391914 (OPTN)
Membrane trafficking [BR:cpea04131]
 Exocytosis
  Small GTPases and associated proteins
   Rab associated proteins
    104391914 (OPTN)
 Protein recycling
  Rab GTPases and associated proteins
   Other Rab GTPase associated proteins
    104391914 (OPTN)
 Autophagy
  Mitophagy
   PINK1-Parkin associated proteins
    104391914 (OPTN)
  Xenophagy
   Cargo receptors
    104391914 (OPTN)
SSDB
Motif
Pfam: CC2-LZ NEMO zf_C2H2_10 DUF6439 Zn_ribbon_3 EDR4-like_1st zf-C2H2
Other DBs
NCBI-GeneID: 104391914
NCBI-ProteinID: XP_009999567
LinkDB
Position
Unknown
AA seq 556 aa
MSSKLKNRTAENGEHPRSNMANGTDSLAAPTLSTYTPEEMVQQMKELITENNELKEAMKV
HNQAMKDRYEELSIWREKQKEEREFYELKFKEAKQCLLAKCIENEQLQQQLQSLKGREGA
EMEGCGALEKEAKQLKCQVQRLQAEKADLLAIISELQVKLNISSAEDSFVEIGMNEEITR
TAKEHQENSDEMTSNMSMYMRNKPADESKNLESEELTVSQLLCSLRNETQKREKLEKELQ
DTKERLSKLEKETTSCLEGGTQTEQQEEETSEAVGSEVEALNLQVCALFKELQEAHEKLK
EAELIQKKLQEKCQVLERKSSAAASELEENQQLIYSIRKLELQVESMQAEVKLEQAKTHE
EKARYNSLQDAYSKLLPEVNEARKTIDEMKLKELNRVDKVVVEQLNAKVELAEQALAAKQ
LQIDEMKQIIAKQEEDLETMAVLRAQMEVYCSDFHAERAAREKIHEEKEQLAVQLAYLLK
EQQNLEELSRNSLAEMQNRHGARASDREHSPRLVQRGTGGQDWPEQRNISMYSCPKCGEI
LPDLDTLQIHVMDCIN
NT seq 1671 nt   +upstreamnt  +downstreamnt
atgtccagcaagttgaagaaccgaactgcagaaaatggagagcatcccaggagcaacatg
gcaaatggaacagacagcctggctgcccccaccctcagcacctacaccccagaggagatg
gtacaacagatgaaagaactgatcactgagaacaatgagttaaaagaagccatgaaggtg
cataaccaagctatgaaggaccgatacgaggaactttccatctggcgagagaagcagaaa
gaagaacgagaattttatgaattgaagttcaaggaagctaagcagtgcttgctagccaag
tgcattgaaaatgaacaactacagcaacaacttcagagcttaaagggaagagaaggagct
gaaatggagggctgtggggctctggagaaggaagcaaagcagctgaaatgccaggtgcag
cggctccaggctgagaaggcagatctgctagccatcatttcagagctgcaggtcaagctc
aacatctcatcagcagaggattcctttgtggagattgggatgaacgaagaaataactaga
actgcaaaggaacatcaagagaatagtgatgaaatgaccagtaacatgtctatgtacatg
agaaacaaacctgcagatgaatcgaagaatttggagtctgaggagctaactgtgagtcag
ctgctctgcagccttagaaatgaaactcagaagagggaaaaacttgagaaggagctgcag
gataccaaagagagactgtcaaagctagagaaggagaccaccagctgcctggagggtggg
acacaaactgaacagcaagaggaggaaacttcagaggctgttggcagtgaagtagaagcc
ctgaatttgcaagtttgtgctctgtttaaagagcttcaggaagctcatgagaagttaaaa
gaagcagaattgattcagaagaagcttcaagaaaagtgccaggtactggaaagaaaaagc
tcagctgctgcatcagaattggaggagaaccagcagctaatatacagcatcaggaagttg
gaacttcaggtagagagcatgcaggcagaagtcaagctggaacaagccaagacacatgaa
gaaaaggcaagatataatagcttgcaggatgcatacagcaaactccttcctgaagtaaat
gaggcaaggaaaacaatcgatgaaatgaaactcaaagagctcaacagagtggataaagtc
gtggtggaacaactgaacgcaaaggtggagctggcagaacaagcccttgcagcaaagcag
ctccagatagatgaaatgaagcagatcattgctaagcaagaggaagacctcgaaaccatg
gctgtgctccgtgctcagatggaggtttactgttctgatttccatgctgagagggcagca
agagagaagatccatgaggagaaggagcagctggctgtccagctggcatacctgctaaaa
gagcagcaaaaccttgaagaacttagccggaactctttggcagagatgcagaatcgccac
ggagccagggcatcagatcgggaacactcgcctcgccttgtccaaagaggaactggtggc
caagactggccagaacagcggaatatctcaatgtattcatgtcccaaatgtggagaaatt
ctacctgatttggacacgctgcagatccatgttatggactgcattaattga

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