Chaetura pelagica (chimney swift): 104392087
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Entry
104392087 CDS
T08631
Symbol
TTF2
Name
(RefSeq) transcription termination factor 2
KO
K15173
transcription termination factor 2 [EC:5.6.2.-]
Organism
cpea
Chaetura pelagica (chimney swift)
Brite
KEGG Orthology (KO) [BR:
cpea00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cpea03021
]
104392087 (TTF2)
Transcription machinery [BR:
cpea03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
104392087 (TTF2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
DEAD
Motif
Other DBs
NCBI-GeneID:
104392087
NCBI-ProteinID:
XP_009999747
LinkDB
All DBs
Position
Unknown
AA seq
1155 aa
AA seq
DB search
MPCTKAIVAVTDMTITVACSTQHSLSVPASHCLIHEGCVVELQVLVQQQDRDEYTLFYRC
LKSKLNGKNWCGRIPWQDPKAANMSKAVESEPNAAPLFNPSGQRNPFRVIDKNCEQSSWK
QVKQRTGEESKAEGVEAETESVLVSHKEKKSTSNSSIEKEPLEGLKTKKKQSTVDRSDPE
LKESIVSESKVGSSETWKGKNALWEEEKYSGRESKSSQCVEEEPDGRSKLFPLILGKQSA
STKPPEEQLREKSLKKRGDEETREKEDVSGKNGETKPVSKEEAIFPAAPQSQRAAPKGGA
EAELPKIQIRPGLGQPADEISASDSDEVEFACSSSGKSKPEKSVEGLQSRDIPSGKSGKS
RQGTSLPQAAASQCVEGLQDPKALHNHLVVQLRQKKSTLATVNIQLLPDKGERLLKQVQD
LEAALSALNISTVDTTEKGADSTSSSCPRKSLPDPFSRPDGTKLTTALPFQGPTAGTSSG
SHSHPSAAAAALGSSEYYGHMFGMNSGVQNLYGGRMTEDRIRAVHSAISEAINNLHKSLE
SCPPKQTAAEDPSGLKVPLLLHQKQALAWLLWRESQRPCGGILADDMGLGKTLTMIALIL
AQKQLKTEKRKETLQIWLSKTDSAVIPSHSTLVICPASLIHQWKKEIDRHVGYGKLKVYL
YHGPSRDKHAETLSEYDVVVTTYSLLTKEIWVNMITNVTLKYQKPVMSWSSPCSPLLRVA
WARVILDEAHNVKNPRVQTSIAVCKLRANARWAVTGTPIQNNLLDMYSLLRFLRCSPFDE
YKVWKYQVDNNSKKGGERLSLLTRSLLLRRTKDQLDSSGKPLVSLPQRSTQVHQLKLSAE
EQSVYNVLFARSRATLQSYLKRQEEKNEGRECADGNPFEKVAQEFGVSQKEFLAGSQTAS
QVSSTVHVLSMLLRLRQCCCHLSLLKVALDQVNLNNEGLSLSVEEQLSALTLSELQTPDS
KSTVYLNGTAFETDIFEVTRESTKIAHLLAELKTIQSHSESQKSVIVSQWTSMLKVVAVH
LQRLGLKYATVDGSVNPKQRMDVVEEFNNNPKGPQVMLVSLLAGGVGLNLTGGNHLFLLD
IHWNPALEEQASDRIYRVGQQKDVVIHRFVCEGTVEEKIVQLQRRKKVLAQQVLSGKGET
FTKLTLADLKVIFGI
NT seq
3468 nt
NT seq
+upstream
nt +downstream
nt
atgccctgcaccaaggccattgttgctgtcactgacatgacaatcacagttgcttgcagt
actcagcactcattaagtgttcctgcttctcactgcttgatccatgagggatgcgtggtg
gagctgcaagtcctggttcagcaacaggacagagatgaatacacgttgttttacagatgc
cttaaaagtaagttgaatgggaagaactggtgtggaagaatcccatggcaggatccaaaa
gctgccaacatgtcaaaagctgtagaatctgagcccaatgcagcacctctcttcaatccc
agtggccaaagaaatccattcagagtaatagataagaattgtgaacaatcgtcctggaaa
caagttaagcaaagaactggtgaggaaagtaaagcagaaggcgtagaagcagagacagag
agcgtgctggtgtcacataaagaaaagaaatcaacctccaattcctccatagagaaagaa
cctctagaaggactgaaaacaaaaaagaagcagtccacagtagatagaagtgatccagaa
cttaaagaaagcatagtgtctgaatctaaggttggctcttctgagacttggaaagggaag
aacgccctttgggaggaagagaaatatagtggcagggaatccaagtcttctcagtgtgtg
gaagaagagccagacgggagatcaaagctctttccacttattcttggaaagcaaagtgca
agtaccaagcctccagaggagcagctcagagagaaaagcttaaaaaaacgtggagatgaa
gaaaccagagagaaagaagatgttagtgggaagaatggagaaacaaaaccagtgtctaaa
gaagaggccattttcccagcagcaccacaatcgcaacgtgctgccccaaagggaggagca
gaggcagagctacccaagatacagatcagaccagggctgggacagcctgctgatgaaatt
tctgcctctgacagtgatgaagtagaatttgcttgttcctcatcaggtaaaagtaaacct
gagaaatcagttgagggtttgcagtcaagagacatcccttcaggaaaatcaggaaagagt
aggcaggggacatctttgccacaagctgcagcatcacagtgtgtggaaggactccaggac
ccaaaagctcttcacaaccatcttgtagttcagctgaggcagaagaagagtactttggct
acagtgaacattcagctgctgccagataaaggggaacggttattaaagcaagtgcaggat
ttagaagctgctctcagtgctctgaacatttcaacagtagatactactgaaaaaggggcg
gatagcacaagcagcagctgccctaggaagtctttgcctgacccatttagcaggccagat
ggtacaaagctgacaacggccctgccgttccagggtcctacagcagggacctcttcaggc
tcacacagtcacccctctgctgctgctgctgctttgggttccagtgaatattatggccac
atgtttggaatgaactctggtgtgcagaatctatatggaggaagaatgacagaagaccga
atcagggctgtacacagtgccataagtgaggctattaataatcttcataaatctctggaa
tcctgtccaccaaagcagacagcagctgaagatccctctggattgaaggttccgctgctg
ctgcaccaaaagcaggcgcttgcctggctactctggagagagagtcagaggccatgtgga
ggaattctggcggatgacatgggcttggggaagactctgacgatgattgctctcattctg
gctcagaagcagctgaagacagagaaaagaaaggagacattacaaatatggctatccaaa
actgattctgctgttatcccttcccatagcactttagtaatttgtcctgcgtcattgatc
catcagtggaagaaagagattgacagacatgtgggctatggcaaactgaaggtgtatttg
taccacgggccaagccgagataaacatgcagaaacgctctctgaatatgatgttgttgtc
acaacctacagccttctcaccaaggaaatctgggtcaacatgatcactaatgtcacttta
aagtaccagaagcctgtcatgagctggtcatctccttgttcccctctgctcagggtagct
tgggctcgagttatactggatgaagctcacaacgttaaaaacccaagggttcaaacctct
atagctgtgtgcaaactgagagccaatgccagatgggctgtcactgggacaccaatacag
aacaacttactggacatgtactctctcctaaggtttctacgttgctctccttttgatgaa
tacaaagtgtggaagtatcaggtagataacaactcaaagaagggaggagagaggctaagc
ctcttaaccaggagcctcttactacggagaactaaggaccagctggattcatctggcaag
cccttggtatctctgccccagcgtagcacacaggtgcatcagttgaaactttcagcagag
gagcagtctgtgtacaatgtgctctttgcaagatccagagcaacactacaatcctaccta
aagagacaagaggagaaaaatgaaggcagagagtgtgctgatggtaacccatttgagaaa
gttgcacaagagtttggggtcagtcaaaaggaatttctagcaggctcccaaactgcctcc
caagtttcaagcactgtccatgtcttgtccatgctgttgaggctccgtcagtgctgctgc
catctctccttactgaaagtggctctggaccaagtgaacttgaacaatgaagggctttct
ctctccgttgaggaacaacttagtgctttgaccctgtctgagctccagactcctgattcc
aagtcaacagtctacctcaatggcacagcttttgaaacagatatatttgaagtcaccagg
gagagcaccaagatagctcacctcttggctgaactgaagactattcagagtcactcagag
tctcaaaaaagtgttattgtgtctcagtggacgagtatgttgaaagttgtggctgtgcac
ctccagcgactagggctgaagtatgcgacagtggatggctctgtcaatcctaaacagaga
atggatgtggtagaagagttcaacaacaaccccaaagggcctcaggtaatgttggtctca
ttgctggctggaggtgttggcctgaacttgactggaggaaaccacctatttcttcttgac
atccactggaatcctgctctcgaggagcaggcgtctgaccgcatttaccgagtggggcag
cagaaggatgttgtgatacacaggtttgtctgcgaaggaacggtagaagaaaagattgta
caactccaaagaaggaagaaagttcttgcccagcaggtgctgtcaggcaaaggggagacc
ttcactaagctcaccctggctgacctcaaagttatctttggcatataa
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