Chaetura pelagica (chimney swift): 104392254
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Entry
104392254 CDS
T08631
Symbol
TRIP12
Name
(RefSeq) E3 ubiquitin-protein ligase TRIP12 isoform X1
KO
K10590
E3 ubiquitin-protein ligase TRIP12 [EC:
2.3.2.26
]
Organism
cpea
Chaetura pelagica (chimney swift)
Pathway
cpea04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
cpea00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
104392254 (TRIP12)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cpea04121
]
104392254 (TRIP12)
Enzymes [BR:
cpea01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
104392254 (TRIP12)
Ubiquitin system [BR:
cpea04121
]
Ubiquitin ligases (E3)
HECT type E3
104392254 (TRIP12)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HECT
WWE
HEAT_2
UNC45-central
HEAT_Maestro
Motif
Other DBs
NCBI-GeneID:
104392254
NCBI-ProteinID:
XP_009999934
LinkDB
All DBs
Position
Unknown
AA seq
2039 aa
AA seq
DB search
MSNRPNNNPGGSLRRSQRNTAGAQPQDDAVGGRSHLGQAKHKAHSPPESRKSISKTPKVQ
SNTTSEQSKGHFSKRGSSSSAVLIPQQEDPERISTSEKQKTGQVPKRDNCRGVKRSASPD
YRRTNSPSSAKKPKALQHTETSLETNKPHTKSKRRQLDQEPPKSTQLPSTSKAHTRKGGA
AGSSRSQKRKRTENLSCIKSGSSVESTGAEEKSAKLSKLASKSVTSAKAGCSTITDSSSS
ASTSSSSSAVASASSTVPQGARVKQGKDQNKARRSRSASSPSPRRSSRDKEPSKTSGSSK
FDWAARFSPKVSLPKTKLSLPGSSKSETSKPGPSGLQAKLASLRKSTKKRSESPPAELPS
LRRSTRQKTTGSCASTSRRGSGLGKRGAAEARRQEKMADPDNNQDGVNSSAARTDEAPQG
AAASSSVAGAVGMTTSGESESDDSEMGRLQALLEARGLPPHLFGPLGPRMSQLFHRTIGS
GASSKAQQLLQGLQATDESQQLQAVIEMCQLLVMGNEETLGGFPVKSVVPALITLLQMEH
NFDIMNHACRALTYMMEALPRSSAVVVDAIPVFLEKLQVIQCIDVAEQALTALEMLSRRH
SKAILQAGGLADCLLYLEFFSINAQRNALAIAANCCQSITPDEFHFVADSLPLLTQRLTH
QDKKSVESTCLCFARLVDNFQHEENLLQQVASKDLLTNIQQLLVVTPPILSSGMFIMVVR
MFSLMCSNCPTLAVQLMKQNIAETLHFLLCGASNGNCQEQIDLVPRSPQELYELTSLICE
LMPCLPKEGIFAVDTMLKKGNAQNTDGAIWQWRDDRGLWHPYNRIDSRIIEQINEDTGTA
RAIQRKPNPLANTNTSGHSELKKDDARAQLMKEDPELAKSFIKTLFGVLYEVYSSSAGPA
VRHKCLRAILRIIYFADAELLKDVLKNHAVSSHIASMLSSQDLKIVVGALQMAEILMQKL
PDIFSVYFRREGVMHQVKNLAESEALLTSPPKVCTNGSGTLGATTTISTGTATAASNAAA
DLGSPSLQHSREDSLDLSPQGRLSDVLKRKRLPKRGPRRPKYSPPRDDDKVDNQAKSPTT
TQSPKSSFLASLNPKTWGRLSTQSNSNNIEPARTAGVSGLARAASKDTISNNREKIKGWI
KEQAHKFVERYFSSENMDGSNPALNVLQRLCTATEQLNLQVDGGTECLVEIRSIVSESDV
SSFEIQHSGFVKQLLLYLTSKSEKDAVSRDIRLKRFLHVFFSSPLPGEEPLGRLEPLENA
PLLALVHKMNNCLSQMEQFPVKVHDFPSGNGTGSSFSLNRGSQALKFFNTHQLKCQLQRH
PDCANVKQWKGGPVKIDPLALVQAIERYLVVRGYGRVREDDEDSDDDGSDEEIDESLAAQ
FLNSGNVRHRLQFYIGDHLLPYNMTVYQAVRQYSLQAEEERESTDDESNPLGRAGIWTKT
HTIWYKPVREDEDGSKDCVGGKRGRAQTAPTKTSPRNSKKHDELWHDGVCPSVLNPLEVY
LISVPPENITFEDPSLDVILLLRVLHAISRYWYYLYDNAICKEIIPTSEFINSKLTAKAN
RQLQDPLVIMTGNIPTWLTELGKTCPFFFPFDTRQMLFYVTAFDRDRAMQRLLDTNPEIN
QSDSQDSRVAPRLDRKKRTVNRDELLKQAESVMQDLGSSRAMLEIQYENEVGTGLGPTLE
FYALVSQELQRADLGLWRGEEVTLANPKGSQEGTKYIHNLQGLFALPFGRTAKPAHIAKV
KMKFRFLGKLMAKAIMDFRLVDLPLGLPFYKWMLRQETSLTSHDLFSIDPVVAKSIYHLE
DIVRQKKRLEQDKTQTKESLQYALEALTMNGCSVEDLGLDFTLPGFPNIELKKGGKDTPV
TIHNLEEYLRLVIFWALNEGVARQFDSFRDGFESVFPLSHLQYFYPEELEQLLCGSKTDT
WDAKTLMECCRPDHGYTHDSRAVKYLFEILSSFDSEQQRLFLQFVTGSPRLPVGGFRSLN
PPLTIVRKTFESTENPDDFLPSVMTCVNYLKLPDYSTIEIMREKLLIAAREGQQSFHLS
NT seq
6120 nt
NT seq
+upstream
nt +downstream
nt
atgtccaaccggcctaataacaatccaggggggtcactgcgacgttcacagaggaacact
gctggggcccagccacaagacgacgcagtaggaggaaggtcacatttagggcaggcaaaa
cataaggcacatagccctcctgagagtagaaaatcaatttcaaagacacccaaagtgcag
tctaatactacttctgagcagtccaagggacacttttctaaaagaggctctagctcatct
gctgttttaataccacaacaagaagatccagagagaatcagtacttcagaaaagcaaaaa
acggggcaagtgcctaagagagacaattgtcgaggagttaaacgcagtgctagtccagat
tacaggaggaccaattctcctagctctgctaaaaaacccaaagcacttcagcacactgaa
acttccttggaaactaataaaccacatactaaatctaaaagacgacagttagaccaagaa
ccgcccaagtctacacaattgccatcaacaagcaaggctcacaccagaaagggtggagct
gctggtagctcccgaagtcagaaaaggaaaaggacagagaatctgtcttgtataaagagt
ggttcatcagttgaatcaactggcgctgaagagaagtcagcaaaactctccaagctggct
tcaaaatcggtgacctcagccaaagctgggtgtagcaccattactgattcttcttcttca
gcttccacatcctcctcctcttctgctgttgcctctgcttcttctactgttcctcaaggt
gccagagtgaaacagggaaaggaccagaataaggctagacgttctcgttctgcatccagc
cccagtccaagaaggagtagcagggacaaagaaccaagtaaaacaagtggctcttcaaag
tttgactgggctgctcgattcagcccaaaagtcagtctccctaaaacaaaactgtctcta
ccaggctcttccaagtcagagacatcaaaacctggaccttcgggactacaagctaagcta
gcaagtctaagaaaatctacaaagaagcgcagtgaatcaccacctgctgagctccccagt
ttgcggcggagcacacggcaaaagaccacgggctcctgtgctagcaccagtcggcgaggc
tctggcctgggcaaaagaggagcagctgaagctcgccgacaggagaagatggctgatcct
gacaacaaccaggatggagttaactcttcagctgcgcgtacagatgaggctccccaggga
gctgcagcttctagttctgttgctggggctgtaggtatgacaacctctggagaaagtgag
tcagatgattctgagatgggaagactgcaagctctattagaggctaggggtcttcctcct
cacctgtttggccctcttggtcctcggatgtcgcagctcttccacaggacaattggaagt
ggagctagttccaaagcccaacagcttttacaaggtctccaagccactgatgaaagtcag
caactacaggcagtgattgagatgtgccagctgttggtcatgggaaatgaagaaacatta
ggaggatttccagtcaagagtgttgtaccagctttgataactctgctgcagatggagcac
aactttgatattatgaaccatgcgtgtcgggccttaacgtatatgatggaagcacttccc
agatcgtctgcagtagtggtggatgcaattcctgtcttcttggaaaagctgcaagttatt
cagtgcattgatgtggcagagcaggcacttacagctctggagatgttatcacgcaggcat
agtaaagccattctgcaggcaggtgggttggcagactgtttactctatctggaattcttc
agtataaatgcacagaggaatgccctagctattgctgccaactgctgccagagtataaca
cctgatgagtttcactttgtggcagactctttgccactgcttacacaaaggttaacccat
caggacaaaaagtctgttgaaagcacttgcctctgttttgcacggctagtggacaacttc
cagcatgaggagaacttactccagcaggttgcttccaaggatttgttaacaaatatccag
caactcttggtagtgacgcctcctatcctgagctcaggaatgttcatcatggtggtgcgc
atgttttccttaatgtgctccaactgtcctacgcttgcggtccagcttatgaagcaaaat
attgcagaaacgcttcacttcctcctttgtggagcctcaaatgggaattgtcaagaacaa
attgaccttgttccacgaagtcctcaagaactttatgagcttacttctcttatctgtgaa
ttgatgccttgcctgccaaaagagggaatctttgctgttgatactatgctaaagaaagga
aatgcgcaaaatacagatggtgcaatatggcaatggcgagatgacaggggtctctggcat
ccctataacaggattgatagtcgaataatagagcaaataaatgaggatactggaacagca
cgtgccattcagcgaaaaccaaaccctttagccaatacaaacactagtggacattcagaa
ctgaagaaggatgatgctcgagcacaactaatgaaagaggacccagaactggcaaaatcc
tttatcaaaacattgtttggtgttctttatgaagtgtatagttcttcagctggacctgct
gttagacacaagtgccttagagcaattcttaggataatttattttgctgacgctgaactt
ctaaaggatgtgttgaaaaaccatgctgtttcaagtcatattgcctccatgctgtcaagt
caagaccttaagatagtagttggagccctgcagatggcagagattttaatgcaaaagtta
cctgacatttttagtgtttacttcaggagagaaggggtgatgcaccaagtgaaaaactta
gcagagtctgaagctttgctaaccagcccaccaaaagtgtgcactaacggatcaggaaca
ctgggtgccactacaacaataagtactggaacagccactgctgccagtaatgcagctgct
gatttgggctctcccagcttacaacacagccgggaggattctttggatctgagcccacag
ggacgactgagtgatgttttaaagagaaaaagactgccaaaacgagggccaaggagacca
aaatactcgcctccaagagatgatgacaaagtagacaatcaagctaaaagccctacaact
acccaatctcctaaatcttccttcttggcaagtttaaatcctaaaacatggggaagatta
agcacacagtccaacagtaacaatattgaaccagcacgaacagcaggagtaagtggtctt
gcaagggctgcttccaaggatacaatttccaataacagagaaaaaattaagggctggatt
aaggagcaagcccataaatttgttgaacgttattttagttctgaaaacatggatggaagc
aatcctgcactaaatgttttacagagactttgcactgcaactgaacaactcaacctccag
gtggatggtgggacagagtgccttgtagaaatccgtagcattgtctcggagtctgacgtc
tcctcatttgaaatccagcatagtgggtttgttaaacaactgctgctttatttgacatct
aaaagtgagaaagatgctgtaagcagggatatcagattgaaaagatttcttcatgtattt
ttttcttctccacttcctggagaagaaccccttggaagattagagccattagaaaatgca
cctttgttggcattagtccataaaatgaataattgcctcagtcagatggaacagtttcct
gtcaaagttcatgatttccctagtggaaatggaacagggagcagtttttctcttaacaga
ggatcccaagctttaaaattcttcaatacgcatcaactaaaatgccaactgcaaagacat
ccagattgtgctaatgtcaaacagtggaagggtggacctgtgaagattgatcctcttgct
ttggtacaagccattgaaagataccttgtagttagaggttatggaagagttagagaagat
gatgaggatagtgatgatgatggctcagatgaagaaatagatgagtctttggctgctcag
ttcttaaattcagggaatgtgagacacagactgcagttttacattggagatcacttgctg
ccatacaatatgactgtgtatcaggcagttcggcagtacagtttgcaagccgaggaggag
agggagtctacagatgatgaaagcaacccattgggaagagctgggatttggacaaagact
catactatttggtacaaacctgtaagagaggatgaagatggtagtaaggactgtgttggt
ggtaaaagaggaagagcacaaactgctcccacgaaaacctcccctagaaattctaaaaag
catgatgaattgtggcatgatggtgtatgcccttctgtattaaatcctctagaagtttac
ctcatatcagttccacctgaaaacataacatttgaagatccctcattagatgttattctt
cttttgagagttctacatgctatcagtcgatactggtattacttgtatgataatgcaatc
tgcaaggagataattccaacctcagagtttatcaacagtaaactgacagcaaaagcaaac
aggcagcttcaagatcctttggtaattatgacaggaaacataccaacttggctgacagaa
cttggaaaaacatgcccatttttctttccatttgatacccgtcaaatgctgttttatgta
actgcttttgatcgtgatcgagccatgcaaagactactggatactaatccagaaatcaat
caatcagattctcaggatagcagagtagcaccacgactggacaggaaaaaacgcactgtg
aacagagatgagctgttgaaacaggcagaatctgtgatgcaggatctaggcagttcaaga
gccatgttggaaatccagtatgagaatgaagttggcacaggcctaggccccacgctagag
ttctatgcacttgtatctcaggagctacagagagcagacttaggcctttggaggggagaa
gaagtgactttagccaatccaaaaggaagccaggaaggtaccaagtacatccataacctt
caaggcctttttgcacttccttttggtagaacagccaagccagctcacattgcaaaagtt
aaaatgaagttccgctttctaggaaaactgatggccaaggcaatcatggattttagactg
gtggaccttcctcttggacttcctttttataaatggatgttacgacaggaaacatccttg
acgtcgcatgacttgttcagtattgatccagtagtagccaaatcaatatatcaccttgaa
gatattgtaagacaaaagaagagacttgaacaggacaaaacacagaccaaagaaagtcta
cagtatgcgttggaggctctgactatgaatggctgctcagtggaagatctagggctggac
ttcacacttcctgggtttcctaacatagaactgaaaaaagggggaaaagatacaccagtc
accatccacaatttagaggagtatctcagattggttatattctgggcactaaatgaaggt
gttgccagacaatttgactcgttcagagatggattcgaatcagtcttccccctcagtcat
cttcagtacttctaccctgaggagttggagcagctcttgtgcggcagtaaaacggacaca
tgggatgcaaagactttaatggaatgttgcaggccagatcacggttatacacatgacagt
cgtgcagtgaagtatctctttgaaatcctcagtagctttgatagtgagcagcaaagactg
tttcttcaatttgtgacaggtagccccagattgcctgtaggaggctttcgaagtttgaat
cctccgttgacaattgtacgcaagacatttgagtctacagagaatccagatgatttcttg
ccctcagtaatgacttgtgtgaactatctcaaattgccggactattcaactattgagata
atgcgtgaaaaactcttgatagctgcaagagaagggcagcagtcattccatctttcctga
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integrated database retrieval system
