Chaetura pelagica (chimney swift): 104392317
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Entry
104392317 CDS
T08631
Symbol
PDCD6IP
Name
(RefSeq) programmed cell death 6-interacting protein
KO
K12200
programmed cell death 6-interacting protein
Organism
cpea
Chaetura pelagica (chimney swift)
Pathway
cpea03250
Viral life cycle - HIV-1
cpea03272
Virion - Hepatitis viruses
cpea04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
cpea00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
104392317 (PDCD6IP)
03272 Virion - Hepatitis viruses
104392317 (PDCD6IP)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
104392317 (PDCD6IP)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cpea04131
]
104392317 (PDCD6IP)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cpea04147
]
104392317 (PDCD6IP)
Membrane trafficking [BR:
cpea04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT associated proteins
104392317 (PDCD6IP)
Exosome [BR:
cpea04147
]
Exosomal proteins
Proteins found in most exosomes
104392317 (PDCD6IP)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BRO1
ALIX_LYPXL_bnd
T2SSM
DUF7222
Motif
Other DBs
NCBI-GeneID:
104392317
NCBI-ProteinID:
XP_010000009
LinkDB
All DBs
Position
Unknown
AA seq
893 aa
AA seq
DB search
MTGSSSGTGRAPLPPFLRLCPGGPGCCQHIPGSQAGTVNPGGAAPPSGNRSRSGRFPRLC
PLVPPLETLTTKTALLMEVRYYDQLCSIEPKFPFSENQVCVTFTWKDAFDKGSLFGGSAK
LALASLGYEKTCVLFNCGALASQIAAEQNLDNDEGLKAAAKHYQFASGAFQHIKDTVLSA
LSREPTVDISPDTVGTLSLIMLAQAQEVFFLKATRDKMKDAIIAKLANQAADYYGDAYKQ
CQYKDTLPKEVFPVLAAKHCIMQANAEYHQSILAKQQKKFGEEIGRLQHAADLVKTVASR
YDEYINVKDLVDKINRALTAAKKDNDFIYHDRVPDLKDLESIGKASLVKATPVVVPLSQK
FTDLFEKMVPLQVQQSVSVYNQRKADLVNRSIAQMREATNLANGVLASLNLPAAIEDVSG
DTVPQSILNKSKSVIEQGGIQTVDQLMKDLPELLQRNKEILDESLRLLDEEETTDNDLRT
KFKERWQRTPSNELYKPLRAEGANYHNILNKAVQADGQVKERYQSHRDTIALLCKPEAEL
NAAIPSANPAKTLQGSEVVNVLRTLLANLDEVKKEREQLENDLKSVNFDMTSKFLTALAQ
DGAINEEAISVTELDRIYGSYTQKVQESLKKQEELLKNIQNAHQDFSKMKQSNNESNLRE
EVLKNLAVANDNFVELVGNLKEGTKFYNELTEMLLKFQNKCSDIVFARKTERDELLKDLQ
QSIAREPSAPSIPLPTYQTTSAGGTKPAPSSTPTPAPRTMVGTKPQPPARPPPPVISAAS
SSSSATAPSGTPAAAAAPPAAAPVAAPAPIPGASAPAANTAPSQAQGPPYPTYPGYPGFC
QMPMPMGYNPYLYGQYNLPYAPSPVYQNPGQAPYPAPQQPGYPFPQQPYYPQQ
NT seq
2682 nt
NT seq
+upstream
nt +downstream
nt
atgactggaagcagcagtggaacagggagagctccattgcctcctttcctgcgcctgtgc
ccgggagggcccggctgctgtcagcacatccctggatcgcaggcagggacagttaatcct
ggaggagctgcccctcccagcggcaacaggagccgttcaggccgatttcccaggctctgc
cctctcgtgccaccgcttgagacgctcaccacgaagacagccctgcttatggaagtgaga
tactatgatcagctgtgttcaattgaaccaaagtttccattctctgaaaatcaggtctgt
gtaacatttacatggaaagatgcttttgataaaggatcactttttggaggatctgccaaa
ctggctttggcgagtttgggttatgagaaaacctgtgttttgttcaactgtggagcactg
gcaagccagattgcagcagaacagaatctagataatgatgaaggactgaaagctgcagct
aagcactatcagtttgcgagtggtgctttccaacacattaaagacactgttctgtcagcc
ttgagtcgagaacctacagtggacatctctccagacacagttggaacgctgagtcttatt
atgttggctcaagcccaagaagttttttttttgaaagctacaagagataaaatgaaagat
gctatcatagctaaactagctaatcaagctgcagattactatggtgatgcttacaaacaa
tgtcaatataaagatactttgcccaaggaggtgtttcctgttctggctgcaaagcactgc
atcatgcaggccaatgcagaataccatcagtctatcctggcaaaacagcagaagaaattt
ggtgaagaaatcgggaggttacagcatgcagcagacttggtgaaaacagtggcatctcgt
tatgatgagtatataaatgttaaagatctggttgacaaaatcaaccgtgcgctcacagct
gccaaaaaagacaatgacttcatctaccatgaccgggttcctgacctgaaagatttggag
tccattggaaaagctagtcttgtgaaggcaactccagttgttgttcccctcagtcagaaa
ttcactgacctgtttgagaagatggttccattgcaagttcagcaatctgtgagtgtttat
aaccagagaaaggccgacttagtaaaccggtcaatagcccagatgagagaagccacaaat
ctggcaaatggtgtgttggcttccctcaatcttcctgctgctatcgaagatgtttctggt
gatactgttcctcagtctattttgaacaagtctaagtctgtgattgaacaggggggaatt
cagactgttgatcagctgatgaaagatctgcctgaacttctacaaaggaacaaagaaatt
ttagatgaatcgctgagattattagatgaagaagaaactacagacaatgacctgagaaca
aaattcaaagaacgctggcagagaacaccttccaatgaactctataagcctttaagggca
gagggagccaattaccataatattttgaataaagctgtgcaagcggatggccaagttaaa
gagcgttaccagtctcaccgggacacgattgcccttctgtgcaagccagaggcagagctc
aacgcagccattccttctgccaacccagcaaaaacattacaaggaagtgaggttgttaat
gtcttaagaactttgctggccaatctggatgaggttaagaaggagagggaacaactggaa
aatgacctgaaatctgtaaattttgacatgacaagcaaattcctgactgcacttgcacag
gatggtgctataaatgaagaggctatctctgtgactgaattggacagaatttatggaagt
tacacacagaaagtgcaagagtccctaaaaaagcaggaagaacttctcaaaaacattcag
aatgcacaccaggatttttcaaagatgaaacaatcaaacaatgaatctaacttaagagaa
gaagttttgaagaacttagcagtagcaaatgacaacttcgtggaacttgtaggcaattta
aaagaaggtacaaagttttacaatgagctgacagaaatgctgctgaaattccaaaataaa
tgcagtgatattgtctttgctcgcaagactgaaagagatgaactgctcaaagatttgcag
caaagcattgctagggaacccagtgctccctctattcctttgcctacatatcagaccaca
tcagctggaggaactaagcctgctccatcgtcaactcctactccagcacccagaaccatg
gtggggactaaaccacagccaccagcacgtccaccaccaccagtgatttctgcagcaagc
agttcctcttcggcaacagcaccatctggaacacctgcagctgctgctgctcctcctgct
gcagctcctgttgctgctcctgctcctattccaggagccagtgcacctgcagcaaacact
gcaccttcacaggcacagggacctccttacccgacttatccaggttacccagggttttgc
cagatgccaatgccaatgggctataatccatacttgtatggtcagtataatctgccatat
gcaccctcacctgtgtatcaaaaccctggacaagcaccatatccagcacctcaacaacct
ggatacccttttcctcaacagccttattaccctcagcaataa
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