Chaetura pelagica (chimney swift): 104392416
Help
Entry
104392416 CDS
T08631
Symbol
USP16
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 16 isoform X1
KO
K11844
ubiquitin carboxyl-terminal hydrolase 16/45 [EC:
3.4.19.12
]
Organism
cpea
Chaetura pelagica (chimney swift)
Pathway
cpea03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
cpea00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
104392416 (USP16)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
cpea01002
]
104392416 (USP16)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cpea04121
]
104392416 (USP16)
Enzymes [BR:
cpea01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
104392416 (USP16)
Peptidases and inhibitors [BR:
cpea01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
104392416 (USP16)
Ubiquitin system [BR:
cpea04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
104392416 (USP16)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UCH
zf-UBP
Motif
Other DBs
NCBI-GeneID:
104392416
NCBI-ProteinID:
XP_010000115
LinkDB
All DBs
Position
Unknown
AA seq
823 aa
AA seq
DB search
MGKKRIKSKTPQSDESLDALEPVCKHIRKGLEQGHLKKALLNVEWHVCQDCKADNKTQEK
SEEETDEGPSIWLCLKCGHRGCGRNSQEQHALKHYETPRSDPHCLVLSLDNWSVWCYICD
NEVPYNTSTRLGQTVDYIRKQVCTGSSRTAEKQQENKGLENKKVEKNSKNEQEKEISLKE
ENSHSSNNLEVTVKGLSNLGNTCFFNAVMQNLSQTPVLRELLKEAKMPGISVKIESPELS
TEPQLIKLDQPGPLTLAMYQFLMEMQDTKRGVVTPKELFAQVCKKAIRFKGYQQQDSHEL
LRYLLDGMRAEEIQRVSVGILKALTDSNKQNEEELKKKINEYEKEKGIQSFVDRIFGGEL
TSTIMCDECRTVSLVHETFLDLSLPVLDDQKVKITNERNVKKNKEKESEDEEDKNNDCYL
KQRDETPGTSKHLLKKRKKQAKKEAKNQRRQQKLQGKILHLTDICAPEQSEEDVKYNQES
ESETNSGTPGLKQEESSNDCKDHCLTEKDLNIQEKSTEVQSMHENTGKPEQECVENESLM
ELSTESLVSPTKFVNGFDNLSLKDEDDENEDEEGLAADFSKLHVGADAESDTSTLDDLPS
VPTKMCEVSTEDPETAFCTLANREDLNPEESSIHHCLYQFTRNEKLTETNKLLCDVCTQR
HYGPKNNIKSEKKYVYTNAKKQMLISLAPPILTLHLKRFQQAGFNLRKVNRHIKFPEVID
LAPFCTAKCKNVAEGNTKVLYSLYGVVEHSGTMRSGHYTAYAKMRSLNNHLSDLVLRGQT
PQALETELVKGQWFHISDTHVQAVSASKVLSSQAYLLFYERLL
NT seq
2472 nt
NT seq
+upstream
nt +downstream
nt
atgggaaagaaacgcatcaaaagcaaaactccacagtctgatgaatctctggatgcgctg
gaacctgtgtgcaagcatattcgtaaaggattggaacaaggtcatctgaaaaaggcactg
ctgaatgtggaatggcatgtttgtcaggactgcaaggcagacaataagacacaagagaaa
tctgaggaggagactgatgaaggcccctcaatatggttatgtctaaaatgtggccatagg
ggctgtggcagaaattctcaggaacagcatgctttaaagcactatgaaacaccgagatca
gatccccattgtctggttctcagtttggacaactggagtgtgtggtgctacatctgcgat
aatgaagtcccatataatacttcaacccgattgggtcagactgtggattatattagaaaa
caagtttgtactggctcatcacgtacagcagaaaaacaacaagagaacaaagggcttgaa
aataaaaaagtagaaaaaaacagcaaaaatgagcaagagaaagaaatctcccttaaagaa
gagaattctcattcaagtaataacttggaagtgactgtaaaaggacttagtaacttggga
aatacatgtttctttaatgccgtgatgcagaatttatcacaaactccagtcctgagggaa
ctgcttaaagaagctaaaatgcctggcatatcagttaaaattgagtcacctgagttatcc
acagaacctcaactgataaaactagatcagccgggtcctttgacattagccatgtatcag
ttcctgatggaaatgcaagacacaaaaagaggggtagtcactcctaaggaactttttgct
caggtttgtaaaaaagcaatacgatttaaaggttatcagcagcaagacagtcatgaattg
cttcgttacttacttgatggaatgagagcagaagaaatccagcgagtaagtgttggaata
ctgaaggctttgactgactctaacaaacaaaatgaagaagaacttaaaaagaaaattaac
gaatatgaaaaggaaaagggaatacaaagttttgtagatcgaatctttggtggagaatta
accagtacaattatgtgtgatgaatgcagaaccgtatccttggtccatgagactttcctt
gatttgtcgcttcctgtactagatgatcagaaagtaaaaattaccaatgagagaaatgtt
aaaaaaaacaaagaaaaggaatctgaagatgaagaggataaaaacaatgactgttacctt
aagcagagagatgagacccctggtacaagtaagcaccttctgaaaaaaagaaagaaacag
gccaaaaaggaagccaagaaccagcgccgccagcaaaagcttcaaggaaagattcttcac
ttgacagatatctgtgcacctgaacagtcagaagaagatgtcaagtataaccaggaatca
gagtcagaaactaactctggaactcctggtctgaagcaagaagaatcatcaaatgattgc
aaagatcactgcttaactgaaaaagacttgaatatacaggaaaagagtacagaagttcag
agtatgcatgaaaatacaggaaagccagagcaagagtgtgtagaaaatgagtctctcatg
gagctctctacggaaagcttagtttctccaacaaagtttgtcaatggctttgacaaccta
tctttgaaagatgaggatgatgaaaatgaagatgaggaagggcttgctgctgacttctca
aaactacacgtgggtgccgatgctgaatctgatacgagtaccttagatgaccttccaagt
gttcccaccaagatgtgtgaagtatcaactgaagatccagaaacagcattttgtactctt
gcaaacagggaagatctgaacccagaagaaagttcaatccatcactgtttgtatcaattt
acccgtaatgaaaaactcactgagaccaataaactactctgtgatgtatgtacacaaaga
cattatggaccaaagaacaacataaaaagtgaaaagaaatatgtttatactaatgccaaa
aagcagatgttaatctctcttgctcctccaattttaactcttcatttaaagaggtttcag
caggctggctttaatctacggaaggttaacaggcatatcaagtttccagaagtgatagac
ttggctcctttctgtacagctaaatgtaaaaacgtggctgaagggaatacaaaagtactg
tactctctctatggagttgttgaacacagtggaacaatgaggtctgggcactacactgct
tatgctaaaatgagaagtctgaacaaccatctctctgatcttgtccttcgaggacaaact
cctcaagctttagaaactgaactagtaaaagggcagtggttccacatcagtgatacccat
gtacaagctgtatctgcatcaaaagtgctgagctcacaagcctatctcctgttctatgag
cgactgctgtaa
DBGET
integrated database retrieval system
