Chaetura pelagica (chimney swift): 104392421
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Entry
104392421 CDS
T08631
Symbol
SCAF4
Name
(RefSeq) splicing factor, arginine/serine-rich 15
KO
K13167
SR-related and CTD-associated factor 4
Organism
cpea
Chaetura pelagica (chimney swift)
Brite
KEGG Orthology (KO) [BR:
cpea00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cpea03021
]
104392421 (SCAF4)
03041 Spliceosome [BR:
cpea03041
]
104392421 (SCAF4)
Transcription machinery [BR:
cpea03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
104392421 (SCAF4)
Spliceosome [BR:
cpea03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR proteins
104392421 (SCAF4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CID
RRM_1
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
104392421
NCBI-ProteinID:
XP_010000124
LinkDB
All DBs
Position
Unknown
AA seq
1079 aa
AA seq
DB search
MEMKPPISRAKMILITKAAIKAIKLYKHVVQIVEKFIKKCKPEYKVPGLYVIDSIVRQSR
HQFGTDKDVFGPRFSKNITATFQYLYLCPSEDKSKIVRVLNLWQKNGVFKIEIIQPLLDM
AAGTSATAPMTENATNNEGSPPPPAKVPSEPPQVTANSVPTVPQLPSSDAFAAVAQLFQT
TQGQQLQQILQTFQQPQKPQSPVIDNTVMAQVQAITAQLKTAAAQPPEQKAAFPAPEQKT
SFDKKLLDRFDYDDEPEAVEDSKKEDSAPSPSVSQPALTPLSFSAQAGWCSIPGGFPGEA
IQQPVFPQLPNMDPFQQRMIGIQQDPMRHQVPLPPNGQMSGFGLLPTPQFPPMAQPVIPP
TAPVQQTFQSPFPVQAESHMQKPHQQDMEVEQPPVVQEGKRHASDNRKSRSRSASRSPKR
RRSRSSSRSRRSRHRRSRSRSRDRRRHSPKSRSQERRERERDKERRLKGLPPNKSETVSV
CSTTLWVGQLDKRTTQQDVGSLLEEFGPIESINMIPPRGCAYIVMVHRQDAYRALQKLSR
GNFKVNQKSIKIAWALNKGIKPDYKQYWDVELGVTYIPWDKVKPEDLESFCEGGMLDNET
LSPEWKGIPKKSENEVAQNGGAEATHNEPVSPIPKALPVPIPVPMPAPITVPPPQVPPHP
SGPPVVGALQPPAFTAPLGIPPPGFAPGVPPPPPPPFLRPGFNPMHLPPGFLPPGPPPPI
TPPVSVPHTPAVNIPNSTATGVNEDTAKDSSVGNPIPTVVSGSRGNAETTDSSKIYGTVP
PPVAPTNVPAPVTQTLPLLGTQGVAPPPPAPVVGLQTPSTGLLGARPGLIPLQRPQGMPP
PPLQRFPLMPPRHMPPHMMHRGPPPGPGGFGMPPPHGMKTPFPPPGHFVRPGGMQGSSGP
GGPEDNRDGRQFRNDRQTYTPNRDQERFGRRSFGNRVENDRERYGNRSDDRDHERSSNRD
RRDWGRRSPERDRHRDLEDRNRRSSGHRDRERDSRDRESRRDKEENRGKEKAEMTDRADG
DKNHESHSSQMEDADIVSELTAGESEPAGAKPVEELTSEATSSVEQAEKEMGSVAEAPR
NT seq
3240 nt
NT seq
+upstream
nt +downstream
nt
atggagatgaaacctcctatttcccgagcaaagatgattctcatcacaaaagctgccatt
aaagctattaagctgtacaagcatgttgtccagattgtagagaagttcatcaaaaagtgc
aaaccggaatataaagtccctggattgtatgttattgattctattgttcgtcagtctcgt
caccagtttggaacagacaaagatgtatttgggccaagattctcaaaaaatattactgcc
acattccagtatttgtatctctgtccatctgaagacaagagtaaaatagtccgtgtcctg
aacctctggcagaaaaatggagtatttaaaatagaaataattcaacctcttctggatatg
gcagcaggaactagtgccactgcaccaatgacagaaaatgctactaataatgaaggttcg
ccaccccctccagcaaaggttccttcggagccccctcaagttactgctaactcagtacct
actgtgccacagttgcccagttctgatgcctttgcagctgtagctcagttgtttcaaaca
acgcaaggacaacagcttcagcaaattcttcagacttttcaacagcctcaaaaaccccaa
tcaccggtcatagataacactgtgatggctcaggttcaagctattactgctcagttgaaa
actgcagcagcacaaccaccagaacaaaaagctgctttcccagcacctgagcaaaaaact
tcatttgacaaaaaactgctagatcggtttgattatgatgatgaaccggaagcagtggag
gattcaaagaaagaagattcagctccttctccttcagtttctcagccagctttgacccct
ctctcattcagtgcacaggctggatggtgctcaatacctggtggatttccaggagaagct
atacaacagccagtttttcctcagctcccaaatatggatccttttcagcagcgaatgata
ggaatacaacaggatccaatgcgtcaccaggttccacttcctcctaatgggcaaatgtca
ggttttggtctcttgcctaccccgcagtttccacccatggctcagcctgtgattccacca
acagcacctgtgcagcaaacttttcagtctccctttccagtacaggctgaatcacacatg
cagaaaccacatcagcaggatatggaagtagagcagccacctgttgttcaagagggaaaa
cgtcatgcttctgacaacagaaagtcaaggtctagatctgcatcaaggtcacctaaaagg
agacgttcaagatctagctcccgatctcgaaggtcacgtcatcgacgatctcggtcgcga
tccagagatagacgccgacactctccaaagtctcggtcacaagaaaggcgtgaacgtgag
agggataaagagcgaaggttgaaaggcctcccaccaaacaagtcagaaactgttagtgtt
tgtagtactacgctctgggtaggacaacttgacaaaaggacaactcaacaagatgttgga
agtcttttggaggagtttggcccgattgagtcaataaatatgataccgcctagaggatgt
gcctatattgtaatggttcacagacaagatgcttaccgtgccctacagaaactgagccga
ggaaactttaaagtcaatcagaaatctataaagattgcatgggctttgaataaaggaata
aagccagattacaagcagtattgggatgtagaattaggtgttacttacataccatgggac
aaagtgaaacctgaagatcttgaaagtttctgtgaaggaggaatgttggacaacgaaact
cttagtccagagtggaaggggattcccaagaagtctgaaaatgaagtagctcaaaatgga
ggtgcagaagctacacataatgagccagtttcacctatacctaaagctttacctgttcca
attcctgttcccatgcctgcaccaataacagtacctcctccacaggttccaccacatcca
tcaggtcctcctgtggttggtgcactccaaccacctgcttttacagcacctttaggaatc
ccacctcctggatttgctcctggagtgccaccaccgccaccgcctccatttttacggcct
ggtttcaacccaatgcatttacccccaggatttcttcctcctggaccaccaccacctata
actcctccagtatctgttcctcacactccagcagtaaacatcccaaactctacagcaact
ggtgtgaatgaagacactgcaaaagattcttctgtaggaaatcccatcccaacagtggtt
tctggatccagagggaatgctgaaactactgatagttccaaaatatatggaactgttcca
cctcctgtagcacctactaatgtacctgctcctgtcacccaaactcttccacttcttggc
actcaaggtgttgcgccacccccgccagccccagtcgttgggttgcagactccatccact
ggcctcttgggtgcccggcctggtttgataccactccagcgaccgcaaggaatgccaccc
cctcctctgcagcgctttcccttgatgccaccacgacacatgcctccccacatgatgcac
agagggcccccgcccgggccagggggctttgggatgcctcccccccatggaatgaaaacc
cccttcccacctccaggtcactttgtgagacctggggggatgcagggaagcagtgggcca
ggtggacccgaggataacagagatgggaggcagtttaggaatgacaggcagacatacaca
cctaacagagaccaggagaggtttggaaggagatcttttggcaatcgggtagaaaatgat
cgggagcgctacggtaaccgcagcgatgacagagatcacgagcgatctagtaatcgcgac
aggcgagactggggaagaagaagccctgagcgtgacaggcacagagacttggaggacaga
aacaggcgatccagtggccatcgagacagagagagagattcgcgggatagggagtctcgc
agagacaaggaggagaatcgaggcaaggaaaaagcagagatgacagacagggcagatggt
gacaaaaaccacgaatctcatagcagccaaatggaagacgcagacattgtttcagaactc
actgcgggagagtctgaacctgcaggtgcaaaacctgttgaagagttaacatctgaggct
acctcatctgtggaacaggcggaaaaggaaatgggctcagtggcagaggctcctcgctag
DBGET
integrated database retrieval system
