Chaetura pelagica (chimney swift): 104392526
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Entry
104392526 CDS
T08631
Symbol
FREM1
Name
(RefSeq) FRAS1-related extracellular matrix protein 1
KO
K23380
FRAS1-related extracelluar matrix protein 1/2
Organism
cpea
Chaetura pelagica (chimney swift)
Pathway
cpea04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
cpea00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
104392526 (FREM1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04091 Lectins [BR:
cpea04091
]
104392526 (FREM1)
Lectins [BR:
cpea04091
]
C-Type lectins
Lecticans
104392526 (FREM1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin_3
Frem_N
Lectin_C
Calx-beta
Motif
Other DBs
NCBI-GeneID:
104392526
NCBI-ProteinID:
XP_010000235
LinkDB
All DBs
Position
Unknown
AA seq
2183 aa
AA seq
DB search
MKPFEKSWLFLLLPVVLRLGCSSFISANLGMKVMKGQSVFLSEDDLKFSIPREKDVCKVE
VVTNEPVTQRVGKLTPQVFDCHFLPNEVKYTHNGCPILDEDIVMLRLYRFTETETFVETF
TLHVQLLEPDCNIIKMRSRALEVPEYYGLSRAIDKNVLAFEYDRKTNLDCSISIDSSETQ
LPAHGQLITGEVQQDKLHGNQPQGFFPEHSLGQQCRTGSCMLGPGVIHNRKMSCEEFLRM
GIRYQHLDPPSPDTDYIPVKLDLTDRRSKTLHKTEHAWLPVHIKGAVPNQIPKAAPMAKF
ILEVDQFILTPLSTTTIDAEDNETPKRLLVFNITKPPPQGFVTHLSDHTKPIGSFTWKDL
SDLLIAYQPPNNSHTERRNYEVEFEVHDFYFERSLPIVVRLSIRTTDTNAPRVSWNTGLN
LLEGQSRPITWQHFQIVDNDDIQNVRLVTIDGLQHGRLTVRGGKGFMFTVSDIQAGVVLY
HHDDSDSTKDFVVFRIFDGPHSIRHKFPINILPKDDSPPFLISNMVIEVHEGQMILIQGS
MLRASDMDSSDDYILFNITKPPQAGEIMKKPGPNLIGYAVSSFLQRDLFNGIVYYHHLGG
EVFEDSLEFVLCDSHDPPNLSEPQVMMVHIIPVDDQLPREAPGATRHLVVKETEIAHLTK
KHLHFIDVEEQDRELTYTITTYPFFSCAHGDLDAGKLFLVDTIPKLVKDPVALALHSFTQ
HAVNYMKIAYMPPLQDIGPEPQQVQFIFAVSNQHGGTLYGICFNITILPVDNQAPEVSTS
HLRVEEGGLSPVTEAHILISDVDTKQEHLFLLLQRQPEHGVVELDSIPMNEGDRFSCGHL
YTLAVRYRHDGSETLTDVVLFAATDGIHFVEFSLQVKVSPVNDEPPVIRTDPVPVLHCLE
GEEVVLSSKYIYATDADSDDMKLMFVLAHQPYHGILRKAGIAVDRFSQADVTSGLVTYKH
TSGEIGLTPFIDTLTFLVSDKEAGIDVKDCCYDGPLPPPVLLHDRFPVYNINITILPVDN
QPPLIATGARFVVEEGSSAALTTNHLFATDPDTTADDLAFVLVSPPQFGYIENILPSPGF
EKSNIGVSIASFQLKHLKSLKINYVQARHMQMEPTADHFVLYVTDGMHHSAETSFSVIIN
PTNDEVPEFTATNFTVQEGEMKEVDLSVINAVDLDVPKDCLVFRVVQRPQHGFLINGVHG
NDVLHYKKLINHDHNSHALLVDDFSMDLLKNGMKLMYMHDNTENLSDSFKIQLSDGKHKV
LRTISVKVIPVNDEKPVLSKKDDIEVNMGEARIISSAVLSAEDKDTPRERIYYLFERIPE
NGQLQHKVGKSWVTLQTGMKCSQEELDLNLVRYIHTGAIGSKNQDSFTFYLWDGYNRSPA
VNFYINIKDMEKGDIAVSTKPLRVPKGGRGYITTDVLLALDGTDKPEELLYVITSPPQYG
QIEYISYPDIPITSFSQMDVARQIVCYVHNTKAVPEDTFRFIISNGLRTKHGTFMISLEA
ADQALPTLSKNAGLRLVEGTMALLSPDVLQLSDPDTAKENLTFLLAQLPQYGHLYYRGAV
LLQHNFTQQDVDNRDVAYKHQSGDSQMDRFTFVATDMTNEGFIVNGRVQSEPMTFTIQVD
NLDKMAPKIINLRGLSDVELLKNGNYGIYITARSLKASDPNTEDDKIFFKILQGPYYGYL
ENVTTGGFIQEGFSQKDLNSKIILYVINPSWEVNSDNLEFQVTDASGNSAVPQRLELQWS
RIEMQQTEYEVCESVGVVSLKITRAGHSAESAFIAVKVNEISAVLGKDFMVTPANLVQFD
PGMSTKMWNIAITYDGLEEDDEVFEVVLNSPVNAVLGTRTKAVVKILDSKGGQCSYSHSS
GQSKHYFWGRGTLFPVSPGSSSPPRPGNAPLEGIPLPPSKGMREHGENLRQEHSLVNPSR
TRLRVTANGRIVHPSSVVRNGTDAVFEYHGIVSLKIEDDSSSARANKKAQVSVINQAQPQ
INVISSRKTEIPQADKAELTSEPSSRHQNFYSFPKACTPDLKGLLHYEESIQKLFQCDGI
MWKFWNSQSKEVSMKKCPAGWSHHEGSCYFLVVNQKVSWNTAAQTCREQYLGSLASVANE
QHMQWLWDFSGRKPFWIGLNDQVNPGHWEWNGGEPVTYINWRRGSYHFPKRGRNCVLVQK
RGKWQATDCRKVKRNSYICSRKL
NT seq
6552 nt
NT seq
+upstream
nt +downstream
nt
atgaagccctttgagaaaagctggttgtttctactgctgcctgttgtactaagacttggc
tgctcctcctttatcagtgccaacctcgggatgaaagtgatgaagggacagtctgtcttc
ctgtcagaagatgacctcaagttttccatccctagagagaaggatgtctgcaaagtggaa
gtggtgaccaatgagccagtaacgcagagggttgggaaactaactccacaggttttcgac
tgccacttccttcctaatgaggtcaaatatacccacaatggctgcccgattttagatgaa
gatatagtcatgcttaggctgtacaggtttacagagactgagacgtttgtagaaacattc
accctccatgtgcagttacttgagccagactgtaacatcatcaaaatgcgctcccgcgct
ctggaggtccctgagtactatggcctgtccagggcaattgacaagaatgtccttgctttt
gagtatgacaggaagacaaatctggactgcagtatttccatagactcttctgaaacccag
ctgcctgctcatggccagctcatcactggggaagttcagcaagataagctgcatggaaat
cagccacaaggcttcttccctgagcacagtctgggccagcagtgcagaactgggagctgc
atgctgggaccaggagtcattcacaacagaaaaatgagctgtgaggaatttctgaggatg
gggattcggtatcagcaccttgaccctccctcgcctgacactgattatattcctgtgaag
ctggatctcacagatagaagaagcaaaactctgcacaagactgagcatgcatggctccct
gttcacattaaaggcgctgttcccaatcaaatacccaaagctgccccaatggcaaagttc
atcctggaagtagaccaatttattttaacccccctctcaaccacaaccattgatgctgaa
gacaatgaaactccgaaacgcctgcttgtgttcaacattaccaagccgcctccgcagggc
ttcgtcactcatctatctgaccacacaaaacctattggctccttcacatggaaagatctc
agtgacttgctcatcgcttatcagcctccaaataacagtcacacagagaggaggaattat
gaggtggagtttgaagttcatgacttttactttgaaagaagtttaccaattgttgtacgt
ctttccatcagaacaacagatacaaatgctcctcgggtttcatggaatacaggcctcaac
ctcctggaagggcaatcccgacccatcacttggcaacacttccaaattgtagacaatgac
gacatccaaaatgttcgcttggtcacaattgatggcttacagcacgggcggctcaccgta
agaggagggaaaggattcatgttcacagtctctgacattcaggctggagttgttctctac
catcatgatgacagcgactctactaaggactttgtggtttttcggatttttgatggcccc
cacagtattcgccataagtttccaatcaatattctccctaaagatgacagtcctccattt
cttatcagcaatatggttattgaagttcatgagggacagatgatcttgattcagggctcc
atgcttcgtgcttctgacatggattccagtgatgattacatactattcaatattaccaag
cccccacaggctggagaaatcatgaagaaaccaggaccaaacttgataggctatgctgtc
agcagttttcttcagagggatctatttaatggaatagtttattatcatcatttgggagga
gaagtgtttgaggattcccttgagtttgtgctgtgtgatagccatgaccctcccaatctc
tcagagccacaggtgatgatggtacacattatccctgtggatgatcagctaccaagggaa
gccccaggagcgacccgccacctggttgttaaggagactgagattgctcacctaactaag
aaacatctccacttcatagatgtggaagagcaagacagggaactcacatacaccataacc
acttacccatttttctcttgtgcacatggtgacttggatgctggcaagttatttctggtg
gacactatccccaaactggtcaaggatcctgttgctcttgccctgcactcatttactcag
catgcagtgaactatatgaaaattgcctacatgccacctctgcaagacatcgggcctgaa
cctcagcaggtccagtttatttttgctgtcagcaatcagcatggtggaactttgtatggt
atctgcttcaatattacaatccttcctgtggacaatcaagccccagaggtttctacaagc
catttgagagtggaagagggtggcctgagccctgtcacagaggcacacattctcatctct
gatgtggacacaaaacaggaacatctattcctcctcctgcagagacagcctgagcatggg
gtggtggagctggacagcattcccatgaatgaaggcgataggttttcctgtgggcacctg
tataccctggcagtcaggtataggcatgatggctccgagactctcactgatgttgtcctc
tttgcagccacagatggcattcactttgtagagttcagcctgcaggtcaaggtgtcgcct
gtgaacgatgagccacccgttatccgaacagaccctgttcctgtgcttcactgcctggag
ggtgaagaagtggtcctctcctcaaagtatatttatgccacagatgcagacagtgatgac
atgaaactgatgtttgtgctggctcaccagccctaccatgggatattgaggaaagctggc
attgctgtggatcgtttctcccaggctgatgtcacctctggtttagtcacatataaacac
actagtggagagattggactgactcctttcattgacactttaacctttcttgtctctgac
aaagaagctggcatagatgtgaaagactgctgttatgatggacctcttcctcctccagtt
ctgcttcatgatcgatttccagtatacaatattaacatcaccatattgccagtggacaac
cagcctccattaattgcaactggtgcaaggtttgtggtggaggagggctcctcggcagcc
cttaccaccaaccatttgtttgccactgaccctgacaccactgcagatgacttagcgttt
gtcttggtttctcctccccagtttggttacattgaaaatatactgccttctccagggttt
gagaagagcaacattggtgtaagtatagcttcctttcagctgaaacacctgaaatccctg
aaaataaactatgtacaagccaggcacatgcaaatggaaccaacagcagaccactttgtg
ctttatgtcactgatgggatgcatcattcagcagagacttcattttctgtgataatcaac
ccaaccaatgatgaagtcccagaattcacagcaacaaattttacagttcaagagggggag
atgaaagaagtggatctctctgttatcaatgcagttgatctggatgtgcccaaagactgt
ctagtatttagggttgtgcagaggccccagcatgggttccttattaatggtgttcatggc
aatgatgttcttcactataagaagttaattaaccatgaccacaacagccatgcgttgctt
gttgacgacttttccatggatctactgaagaatggaatgaagctgatgtacatgcatgac
aatacggaaaacctcagtgacagctttaaaatccagctatcagatgggaagcataaagtc
ctcagaaccatttcagtaaaggtcattccagttaatgatgagaaaccagtgctgagcaag
aaggatgatatagaggtgaacatgggtgaagctcgaataatttctagtgctgttctgtca
gcagaagataaagatacccccagggagagaatttactacttatttgaaagaattccagaa
aatggtcagcttcagcacaaggtaggcaaaagttgggtgactctccaaactggaatgaag
tgcagtcaggaagaactggatctgaatcttgtgagatacatccatacaggagctataggg
tccaagaaccaagacagcttcacattttatctgtgggatgggtacaacagatccccagct
gtgaacttctacataaatataaaggacatggaaaagggagacattgctgtttccacaaaa
cctcttagagtgccaaaagggggtcggggctatattacaactgatgtcctccttgcactg
gatggtactgacaagccagaggagctcctttatgtgataacctcccctcctcagtatgga
caaatagagtatatcagctatcctgacattcccattacaagcttcagtcaaatggatgta
gcaagacagatagtttgctatgttcacaacactaaggcagttcctgaagatacattcaga
ttcatcatcagcaatggactgaggactaagcatgggacattcatgatctccttggaagca
gctgatcaagctttgccgacgctatctaaaaatgcagggctaagactagtggaaggcact
atggcacttctttctcctgatgttctgcagctttcagacccagacactgccaaagaaaac
ctcaccttcctgttggctcaactcccccagtacggtcatctctattatcgaggggctgtg
ctactgcagcacaatttcacccagcaagatgtagacaacagggatgttgcatacaagcac
caaagtggggattcccagatggacagatttacatttgttgcaacagatatgactaatgaa
ggcttcatcgtgaatgggagggtgcagagcgagccaatgacattcaccattcaggtggat
aatttggacaaaatggcaccaaaaatcattaatctccgtggtctttctgatgtggaactg
ctgaagaatggcaattatgggatctatattactgccaggtccctgaaggcatctgacccc
aatacagaagatgacaaaatattttttaagattctacaaggtccttattatggctacctg
gaaaacgtaacaacaggtggatttattcaggaagggtttagccaaaaggatttaaacagc
aaaatcatactttatgtcatcaatccatcatgggaagtgaattcagacaacttggagttt
caagtcacagatgccagtggaaactctgcagtgcctcaaaggctggagctgcagtggtct
cgaattgaaatgcaacagactgaatacgaagtgtgtgagagcgtgggagtggtgtctctg
aaaatcaccagagcaggacactctgcagagtctgcctttattgcagtgaaggtcaatgaa
atatctgctgtgctgggaaaggactttatggtgactcccgccaacctcgttcagtttgat
ccaggaatgtcaacgaagatgtggaatatagcaattacctatgatggattagaggaagac
gatgaagtctttgaagtagttctcaactcccctgtgaatgctgttcttggcactcggaca
aaagctgtagtgaaaattttggattcaaaaggaggtcagtgcagttactcccattcttct
ggccaaagcaagcactatttctgggggagaggcacactgtttccagtttctccaggctcc
tcttcacctcccaggcctggcaatgctcccttggaagggatcccactgcctccttccaaa
gggatgagagagcatggagaaaacctgaggcaggagcacagcttggtgaatccgtcaagg
acaaggctgagagtgactgcaaatggaagaatagttcatccttcatctgtagttagaaat
ggaactgatgcagtttttgaatatcacgggatagtatcactcaaaatagaggatgacagc
tcatcagctagagcaaacaagaaggctcaagtgtcagtaattaaccaagcacaaccacag
ataaatgtcatctcctctaggaagacagaaattccacaagctgataaggcagaactcaca
tctgaaccaagctcaagacatcagaacttttactcttttccaaaggcctgtacaccagat
ttaaagggtctcttgcattatgaagaaagcattcaaaagttatttcagtgtgatgggata
atgtggaaattctggaattcccaaagcaaggaggtaagcatgaagaagtgtcctgctgga
tggagccatcacgagggcagctgctatttcctggtagtgaatcagaaggtcagctggaac
actgctgctcagacttgcagagaacaatacctggggagtctagcaagtgtggctaatgaa
caacacatgcagtggctatgggacttcagtgggaggaagcccttttggataggtttgaac
gaccaagtcaatcctggacattgggagtggaatggaggagaacctgtaacctacataaat
tggagaagaggctcctaccactttccaaagagaggaagaaattgtgtattggtgcagaag
cgaggaaaatggcaagcaactgattgcaggaaggtcaaacggaacagctatatatgttca
agaaagctgtaa
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integrated database retrieval system
