KEGG   Chaetura pelagica (chimney swift): 104392695
Entry
104392695         CDS       T08631                                 
Symbol
LARP1
Name
(RefSeq) LOW QUALITY PROTEIN: la-related protein 1
  KO
K18757  la-related protein 1
Organism
cpea  Chaetura pelagica (chimney swift)
Brite
KEGG Orthology (KO) [BR:cpea00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cpea03019]
    104392695 (LARP1)
Messenger RNA biogenesis [BR:cpea03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     104392695 (LARP1)
SSDB
Motif
Pfam: LARP1_HEAT La SGP DUF5320
Other DBs
NCBI-GeneID: 104392695
NCBI-ProteinID: XP_010000425
LinkDB
Position
Unknown
AA seq 976 aa
MSPISSKAPQVSRSPRPAVSSLEPSPQATQQSHFQPPTTEPEHTTPAKVVRAANPRQRKG
SKVGDFGDATNWPTPGEIAHKSVQQPHKAPSLRKLPVKKDMKEQEKGDGSDGKESLKTKS
DESGEEKNGDDDNQKSAQKKKGNKHKWVPLQIDMKSEVPRDKTASRNNRQNEQHRHPSNN
RSELKGWHPDNKHERSWQDHDETSSVKSEGGAVRGAFRGRGRGRGRGRGRGRGGDHWHFD
YQYGYRKFEGSDGSRTQKYASNITYYFDNISSAELYSVDQELLKDYIKRQIEYYFSVDNL
ERDFFLRRKMDSDGFLPITLIASFHRVQALTTDISLIIKALKDSKVVEIVDEKIRRKEQP
EKWALPGPPMADYTQTDFSQFINCPEFVPRQSFQKETESAPGSPRAASPVPTKTEEVSNL
KTMPKGLSASLPDLDSETWIEVKKRPRPSPARPKKPEESKTPQQQKQKDQDEPEELDFLF
DEEMEQMDGRKNTFTDWSDEDSDYEIDDRDVNKILIVTQTPPYLRRHPGGDRTGNHTSRA
KMSSELAKVINDGLYYYEQDLWTEQFEPEYSQIKQEVENFKKVNMISREQFDTLTPEPPV
DPNQEVPPGPPRFQQVPTDALANKLFGVPEPSTIARSLPTTVPESPNYRNARTPRTPRTP
QLKDPTQTPRFYPVVKEGRTIDAKTPRKRKTRHSSNPPMECHVGWVMDSREHRPRTASIR
YWRWASSPSEGTPAVGSYGCTPQSLPKFQHPSHELLKENGFTQHVYHKYRRRCLNERKRL
GIGQSQEMNTLFXXXXXXXRDHFNKKMYEEFKQLAVEDGKEGYRYGLECLFRYYSYGLEK
KFRPDIFKDFQEETIKDYEAGQLYGLEKFWAFLKYSKAKNLDINSKLQEYLSKFKRLEDF
RVDPPMGEEGGHKRYPSTSGGDGRKRYPSQSSSKTVSQCPSSQAHASPSQPAQEDAKNLS
QQSPAPSAAESQTVGK
NT seq 2931 nt   +upstreamnt  +downstreamnt
atgtccccgatttcctccaaagcaccccaggtatcgcgaagcccacggccagccgtgtcc
agcttggagccatcgcctcaggccacacagcagagccacttccagcctccaaccactgag
ccagaacacacaactcctgcgaaagtggtgagggctgccaacccaagacagcggaaagga
agcaaggttggtgactttggtgatgccacaaattggccaacacctggagaaatagcccac
aagagcgtccagcagcctcacaaagcaccatccctgcggaaactgcctgtcaagaaagac
atgaaagagcaggagaaaggggatgggagtgatggcaaagagagcctgaaaactaaatca
gatgagtccggggaggagaagaatggcgacgatgacaaccagaagtcagcccagaagaag
aaaggcaacaaacacaagtgggtccctttgcagatagacatgaagtcagaggtgcctagg
gacaaaacggcctctcggaacaaccggcaaaacgagcagcacaggcacccttccaacaac
cgcagcgagctgaaaggctggcacccagacaacaagcatgagcgcagctggcaggaccat
gatgaaacctccagcgtgaagagcgagggaggagccgtacgaggggccttccggggccga
ggccggggccggggcaggggccggggccgtggcagaggaggtgatcactggcacttcgac
taccagtatgggtaccggaaattcgagggctcggacggctcccgcacccagaaatacgcc
agcaacatcacttactacttcgacaacatcagcagcgccgagctctacagcgtggaccag
gaactgcttaaagactacatcaagcggcagatagaatattacttcagtgtggacaacctg
gagcgagacttcttcctgcgtcgcaagatggactcggatggcttccttcccatcaccctg
attgccagcttccaccgggtgcaggcactgaccactgacatcagcctcatcatcaaggca
ttgaaggacagcaaggtggtggaaattgtggatgagaagatcaggagaaaagagcagcca
gaaaagtgggctctgcctggccctcctatggcagactacacacagacagacttctcacag
ttcatcaactgccctgagtttgtgccccggcaaagcttccagaaagagacagaatctgca
cctggctccccacgtgctgccagcccagtccccaccaaaacagaggaggtcagtaatcta
aagacgatgcccaagggcctgtctgcaagtctgccagacctggactctgagacgtggatt
gaagtaaagaagagacctcgaccctctccagccagacctaagaaaccagaggagtcaaag
acaccacagcagcagaagcagaaggaccaagatgaacctgaggagctagacttcctcttt
gatgaagagatggagcagatggatggccgcaagaacaccttcactgactggtcagatgaa
gattcagattacgagattgacgatcgggacgtgaacaagatcctcatcgtgacacagacg
cccccttacctgcgccggcaccccggcggggaccggactggcaaccacacatcccgggct
aaaatgagctctgagctggccaaagtgatcaatgatgggctgtattactatgagcaggac
ctgtggacagagcagtttgagccagagtattcacagatcaagcaagaagtggagaacttc
aagaaggtgaatatgatcagtagggagcagtttgacaccctgactccagagccccctgtg
gatccaaaccaggaagtccctcctggtccccccaggttccagcaagtacccacagatgct
ttggctaacaagttgtttggagtccctgagccttcaactattgcccggtctttgcctacg
actgtaccagaatcacccaactaccgcaatgccaggacccctcggacccctcgcacgcct
cagctgaaggacccgacacagacaccccggttctacccagtggtgaaagagggcaggacg
atagatgccaagactccgcggaagaggaagacgaggcacagttcaaaccctccgatggag
tgccatgtgggctgggtgatggactctcgggagcacaggccccgaactgcctccatcagg
tactggagatgggcctccagcccctcggaagggaccccggctgtcggaagctatggctgc
accccacagtccctgcccaagtttcagcatccttcgcacgagctgctcaaggagaacggc
ttcacacaacacgtctaccataagtaccgtcggcgctgccttaatgagcggaaacgactg
ggcattggtcagtcccaggagatgaacacgctcttcnnnnnnnnnnnnnnnnnnnnncga
gatcacttcaacaagaaaatgtatgaggagttcaagcaactggctgtggaggatggaaag
gagggatacaggtacggtctggagtgccttttcagatactacagctatgggctggagaag
aaattccggccagacatttttaaggactttcaagaagagaccatcaaggattacgaagct
ggacagctctatgggctggaaaagttctgggccttcttaaaatattccaaagccaaaaat
ctggacattaacagcaaactgcaagaatacctcagcaagttcaagcgcctcgaggacttc
cgagtggatccacccatgggggaggaaggtggacacaagagatacccttcaacgtcgggg
ggagacggcaggaagcgctacccatcccagtcttccagcaaaacggtcagccagtgccca
tccagccaagcccacgcctcacccagccagcctgcacaagaggatgccaaaaacctgagc
cagcaatcccctgccccctcagccgcagaatcgcagacagtggggaagtag

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