KEGG   Chaetura pelagica (chimney swift): 104392707
Entry
104392707         CDS       T08631                                 
Symbol
RBM22
Name
(RefSeq) pre-mRNA-splicing factor RBM22
  KO
K12872  pre-mRNA-splicing factor RBM22/SLT11
Organism
cpea  Chaetura pelagica (chimney swift)
Pathway
cpea03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cpea00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    104392707 (RBM22)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:cpea03041]
    104392707 (RBM22)
Spliceosome [BR:cpea03041]
 Complex B
  Other components
   Prp19-related factors
    104392707 (RBM22)
 Complex C
    104392707 (RBM22)
SSDB
Motif
Pfam: STL11_N zf-CCCH_RBM22 RRM_1 Torus zf_CCCH_4 Nup35_RRM_2 RRM_occluded zf-CCCH_2 zf-CCCH RRM_3 zf-CCCH_4 RRM_YTH1 zf-CCCH_3 zf-CCCH_10 zf-CCCH_12 zf-CCCH_PARP12
Other DBs
NCBI-GeneID: 104392707
NCBI-ProteinID: XP_010000437
LinkDB
Position
Unknown
AA seq 419 aa
MAASAAAGPLRNRDFQNDFPILCQTCLGENPYIRMTKEKYGKECKICARPFTVFRWCPGV
RMRFKKTEVCQTCSKLKNVCQTCLLDLEYGLPIQVRDAGLSLKDEMPKSDVNKEYYTQNM
EREISNSDGTRPVGALGKATSTSDMLLKLARTTPYYKRNRPHICSFWVKGECKRGEECPY
RHEKPTDPDDPLADQNIKDRYYGINDPVADKLLKRASTMPRLDPPDDKTITTLYVGGLGD
TITESDLRNHFYQFGEIRTITVVQRQQCAFIQFATRQAAEVAAEKSFNKLIVNGRRLNVK
WGRSQAARGKEKDKEGTTESGIKLEPVPGLPGALPPPPAAEEEASANYFNLSPSGPPAVV
NIALPPPPGIAPPPPPGFGPHMFHTMGPPPPFMRAPGPIHYPSQDPQRMGAHAGKHSSP
NT seq 1260 nt   +upstreamnt  +downstreamnt
atggcggcgtctgctgcagccgggccgctgaggaaccgagatttccagaacgacttcccc
attctgtgccagacatgtcttggagaaaacccctatattcgaatgaccaaagaaaaatat
ggaaaagaatgcaagatctgtgccaggcctttcactgtgttccgctggtgccctggggtt
cggatgcgcttcaagaagacagaggtgtgccagacctgcagcaagctgaagaatgtctgt
cagacctgcctgctggacctggagtatggtttgcctattcaagtccgggatgcaggactc
tccctaaaggatgagatgcctaagtctgatgtcaacaaggaatactacacccagaacatg
gaacgggagatatccaattctgatggcaccaggccggttggtgcactgggaaaagctact
tccaccagtgacatgcttctgaagctggctcggaccaccccgtactacaaacggaaccgt
cctcacatctgctccttctgggtcaaaggagaatgcaagaggggagaagagtgtccctac
agacacgagaagccgacagatccagacgatcctctggctgatcagaacatcaaggaccgt
tactatggaattaatgatcctgtggctgataaacttctgaaacgagcatcaaccatgcct
cgtttggaccccccggatgacaagactattacaacactctatgttggaggacttggagat
actatcactgagtcagatctcaggaatcacttctaccagtttggggagatccggacgatc
acggtggtgcagaggcagcaatgtgccttcatccagtttgccacccggcaggcggcagaa
gtggctgctgagaaatccttcaacaagctcattgtcaacggccgccgcctcaacgtcaag
tggggaaggtcccaggcagcaagaggaaaagaaaaggacaaggaaggtactacagaatct
gggataaagctggagccagttccaggacttcctggagctctcccacctcctccagctgca
gaagaggaggcttctgcaaattactttaacctgtctcccagtggccctccagctgtggta
aacattgccttgccacctcctcctggcattgcgccaccaccacctccaggttttggacca
cacatgttccataccatggggccccctcctcccttcatgcgagcccctggccccattcac
tacccatcccaggatccccagaggatgggtgcccacgcagggaagcacagcagcccctag

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