Chaetura pelagica (chimney swift): 104392753
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Entry
104392753 CDS
T08631
Symbol
HMBOX1
Name
(RefSeq) homeobox-containing protein 1
KO
K24885
homeobox-containing protein 1
Organism
cpea
Chaetura pelagica (chimney swift)
Brite
KEGG Orthology (KO) [BR:
cpea00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cpea03000
]
104392753 (HMBOX1)
Transcription factors [BR:
cpea03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
104392753 (HMBOX1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HNF-1_N
Homeodomain
Homeobox_KN
HTH_3
AbiJ_NTD3
DUF494
HTH_24
CUT
HTH_37
HTH_26
HTH_31
HTH_23
Motif
Other DBs
NCBI-GeneID:
104392753
NCBI-ProteinID:
XP_010000491
LinkDB
All DBs
Position
Unknown
AA seq
454 aa
AA seq
DB search
MLRTFPVVLLETMSHYTDEPRFTIEQIDLLQRLRRTGMTRHEILHALETLDRLDQEHSDK
FGRRSSYGGGSYSNSTNNVPASSSTATASTQTQHSGMSPSPSNSYDTSPQPCTTNQNGRE
SNERLSAFNGKMSPTRYPLANSLAQRSYSFEASEEDLDIDDKVEELMRRDSSVIKEEIKA
FLANRRISQAVVAQVTGISQSRISHWLLQQGSDLSEQKKRAFYRWYQLEKTNPGATLSMR
PAPIPIEEPEWRQTPPPVTATSGTFRLRRGSRFTWRKECLAVMESYFNENQYPDEAKREE
IANACNAVIQKPGKKLSDLERVTSLKVYNWFANRRKEIKRRANIAAILESHGIDVQSPGG
HSNSDDVDGNDYSEQDTWQVRNGEEEGRCSEGGREAEKVEEDRRICSKQDDSTSHSDHQD
PISLAVEMAAVNHTILALARQGANEIKTEALDDD
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
atgctgagaacttttccagtagttctgctggaaaccatgtctcactacacagacgaacca
agatttaccatagagcagatagacctgcttcagcgcctgagacgtacaggaatgaccaga
catgaaatcctacatgcactggaaaccttggatcgtcttgatcaagaacatagtgacaaa
tttggaagaaggtctagctatggaggtggctcctacagcaacagtaccaacaatgtccca
gcatcttcctctacagctacagcttcaacacagacccagcattctgggatgtccccatca
ccgagcaacagttatgacacctccccacagccttgcactactaatcagaatgggagggag
agtaacgagaggttgtctgcgttcaatgggaagatgtcacctacccgctacccacttgca
aacagcttggctcaaaggtcatacagttttgaagcttctgaagaggacttggacattgat
gacaaagtggaagaactgatgaggagggacagcagtgtgataaaggaggaaatcaaagcc
ttcctagccaatcggagaatttcccaagcagttgttgcacaggtaacaggtatcagtcag
agccggatctcccattggctgttgcagcaggggtcagacctaagtgaacaaaagaaaagg
gcattttacagatggtaccaacttgagaagacaaatcctggggctacattaagcatgcga
cccgctcctatccccatagaagagccagaatggagacagacgcctcccccagtcacagct
acctctgggaccttcagactacggcgaggcagtcggttcacgtggagaaaggagtgcctg
gctgttatggaaagttacttcaatgagaatcaatatccagacgaggcaaagagagaagaa
attgcaaacgcctgtaatgcagttatacaaaaaccaggaaaaaagttatcggatttggag
cgggttacctcccttaaagtgtacaattggtttgccaacagaagaaaggaaatcaagaga
agagccaatatcgcagcaatcctggagagccatggaatagatgtacagagtccaggaggt
cattccaacagtgacgacgttgatggcaatgactactctgagcaggacacttggcaagta
cgcaatggggaggaagagggaagatgttcagagggaggcagagaagcagagaaggtagaa
gaagacaggaggatctgctccaaacaagatgacagcactagccatagtgaccatcaagac
cccatctcattagctgtggaaatggcagcagtaaaccacaccatcttggcattggcccgg
caaggagccaacgagatcaagacagaggctctagacgacgactga
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