KEGG   Chaetura pelagica (chimney swift): 104392807
Entry
104392807         CDS       T08631                                 
Symbol
RNF115
Name
(RefSeq) E3 ubiquitin-protein ligase RNF115
  KO
K11982  E3 ubiquitin-protein ligase RNF115/126 [EC:2.3.2.27]
Organism
cpea  Chaetura pelagica (chimney swift)
Brite
KEGG Orthology (KO) [BR:cpea00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:cpea04131]
    104392807 (RNF115)
   04121 Ubiquitin system [BR:cpea04121]
    104392807 (RNF115)
Enzymes [BR:cpea01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     104392807 (RNF115)
Membrane trafficking [BR:cpea04131]
 Endosome - Lysosome transport
  Rab GTPases and associated proteins
   Rab associated proteins
    104392807 (RNF115)
Ubiquitin system [BR:cpea04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    104392807 (RNF115)
SSDB
Motif
Pfam: zf-RING_2 zf-RING_11 zf-C3HC4 zf-RING_UBOX zf-C3HC4_2 IBR_1 Zn_ribbon_19 zf-rbx1 zf-RING_5 zf-ANAPC11 VPS18_RING_C Zn_ribbon_PF0610 zf-HC5HC2H zf-RING_Vps41 zf-HC5HC2H_2 zf-RING_16
Other DBs
NCBI-GeneID: 104392807
NCBI-ProteinID: XP_010000543
LinkDB
Position
Unknown
AA seq 242 aa
MLGLGGPQGWVLGVTKEFTCPRCESGFIEEVTEDSSFLDGAGMDDGPSTHFAELWDHLDH
TMFFPDFRPFLSSSSLDQDNRDNERGHQAHAELWGPSRPPRLPMTRRFRSRGSSRPPRSP
XXXXIIQQIFAGFFANSAIPGSQHPFSWSGVLHSNPGDYAWGQSGLDAIVTQLLGQLENT
GPPPADKEKISSLPTVPVTQEQVDTGLECPVCKEDYALAEQVRQLPCNHLFHSSCIVPWL
EL
NT seq 726 nt   +upstreamnt  +downstreamnt
atgttgggtcttggggggccccaaggctgggtcttgggggtcaccaaggagttcacgtgt
ccgcgctgcgagtcgggcttcatcgaggaggtcacagaggattccagtttcctggatggt
gctgggatggacgatggaccctccacacactttgctgagctctgggaccacttggaccac
accatgttcttccctgacttcagacctttcctgagcagcagctccttggatcaggacaac
agggacaacgagaggggtcaccaggcccacgctgagctctgggggcccagtcgccccccc
cggttgcccatgaccaggaggttcaggtcccggggcagctcccgccccccccgctccccn
nnnnnnnnnnggatcatccagcagatctttgcaggcttttttgccaactcagccattcca
ggctcccaacaccctttttcctggagtggggtcctacattccaaccccggggactatgcc
tggggccagagtggcctggatgccattgtcacccagctcctggggcagctggaaaacacg
ggcccccccccggcagacaaggagaagatctcctccctccccaccgtgccagtaactcag
gaacaagtcgatacgggtctggagtgtcctgtctgcaaggaggactacgcgctggccgag
caggtccggcagttgccctgcaaccacctcttccacagcagctgcattgtgccctggtta
gagctg

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