Chaetura pelagica (chimney swift): 104392811
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Entry
104392811 CDS
T08631
Symbol
NEIL1
Name
(RefSeq) endonuclease 8-like 1
KO
K10567
endonuclease VIII-like 1 [EC:3.2.2.-
4.2.99.18
]
Organism
cpea
Chaetura pelagica (chimney swift)
Pathway
cpea03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
cpea00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
104392811 (NEIL1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cpea03400
]
104392811 (NEIL1)
Enzymes [BR:
cpea01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
104392811 (NEIL1)
DNA repair and recombination proteins [BR:
cpea03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
104392811 (NEIL1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Neil1-DNA_bind
COMM_HN
Fapy_DNA_glyco
H2TH
Motif
Other DBs
NCBI-GeneID:
104392811
NCBI-ProteinID:
XP_010000548
LinkDB
All DBs
Position
Unknown
AA seq
417 aa
AA seq
DB search
SSVKLKLICAQVLRDLLGEAMEYEKILKLTSDAKLESGDVKATIAVLGFILSSAAKHSVD
SESLSSELQQLGLPRAYRISAVSRGKELRLRLAPLDPGSPQDLVFRFGMSGSFRLCPAAH
LPRHAHLRFLTRGCPPQALCFVDARRFGSWRLGDAWQPERGPCVLSEYLAFRENVLKNLD
DKAFDKPICEALLNQKFFNGIGNYLRAEILYRLKIPPFEKARTVLEALKEQEQERRKKNP
SLTLSKKLKLKREQPDLLELCHTVPMEVVAAEKNLLEPDHSDNYAAFQSWLQCYLVPGMS
SLRDRNGRTIWFQGEPGPMAPKGQASRGKRAQLKADPEAQAPKVTPRASKRPPRAAAKPP
KPAKEEEEQEEVAEGPRKGRARGKRRKASAAPAPSEPEAAGRRRMSTRRGRGAAPAV
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
tcctcggtgaagctgaagctgatctgtgcccaggtgctgcgggacctgctgggggaggcc
atggagtacgagaagatcctgaagctcacctcggatgccaagttggagtcgggggatgtg
aaagccaccatcgccgtcctgggcttcatcctctccagcgctgccaagcacagcgtggac
agcgagtccctctccagcgagctgcagcagctggggctgcctagagcttaccgcatctcc
gccgtttcccgggggaaggagctgcggctgcgcttggctccgctggatcccggctccccg
caggacctggtgttccgtttcgggatgtcgggctcgttccggctgtgccccgcagcccac
ctgccccgccacgcacacctgcgcttcctgacccgcggctgccccccgcaagccctttgc
ttcgtggatgcccggcgcttcgggtcctggcggctgggggatgcctggcagcccgagcga
gggccctgcgtcctctccgagtacctggccttcagggagaacgtgctgaagaacctggac
gacaaggcttttgacaagcccatctgcgaggccctcttgaaccagaagtttttcaacgga
atcgggaattacctgcgggctgagatcctgtacaggttgaagatccccccctttgaaaag
gctcggactgtgctggaggccctgaaggagcaggagcaggagaggaggaagaagaatcct
tccctgaccttgagcaagaagctgaagctgaagcgggagcagccggatctcctggagctg
tgccacaccgtgcccatggaggtggtcgcggcggagaaaaatctcctggagccagaccac
tcggataactacgctgctttccagagctggctgcagtgctacttggtgcccggcatgagc
tccctgcgcgaccgcaacggcaggaccatctggttccagggagagcctggccccatggct
cctaaagggcaggcgtcccgcgggaagcgcgctcagctgaaggcagaccccgaggctcag
gcccccaaggtcaccccacgtgcctcaaaacggcctccgagggctgcagcgaagccccca
aagccagccaaggaggaagaagagcaggaagaggtggctgaggggccgaggaagggacgt
gcccgtgggaagaggaggaaagcaagtgctgctccagccccctcggagcccgaggcagcc
ggaaggcgccgaatgtctacgcgcaggggcagaggcgcagcccctgccgtgtga
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