Chaetura pelagica (chimney swift): 104392957
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Entry
104392957 CDS
T08631
Symbol
CDH12
Name
(RefSeq) cadherin-12
KO
K06804
cadherin 12, type 2, N-cadherin 2
Organism
cpea
Chaetura pelagica (chimney swift)
Brite
KEGG Orthology (KO) [BR:
cpea00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
cpea04515
]
104392957 (CDH12)
Cell adhesion molecules [BR:
cpea04515
]
Cadherins
Major cadherins
104392957 (CDH12)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
CADH_Y-type_LIR
Cadherin_FAT4_N
Cadherin_CELSR2_9th
Cadherin_2
Stevor
ASFV_J13L
Cadherin_4
Fibulin_C
YxzE
DUF443
RIFIN
VirB3
Motif
Other DBs
NCBI-GeneID:
104392957
NCBI-ProteinID:
XP_010000708
LinkDB
All DBs
Position
Unknown
AA seq
792 aa
AA seq
DB search
MLTRNCLSLLLWVLFDGGLLTPLHPQPQQTLGGPRENVPVPGSRSSAQRVKRGWVWNQFF
VLEEYMGSEPQYVGKLHSDLDKGVGTVKYTLSGDGAGTVFTIDETTGDIHAIRSLDREEK
PFYTLRAQAVDVDTKKPLEPESEFIIKVQDINDNEPKFLDGPYVASVPEMSPVGAYVLQV
KATDADDPTYGNSARVVYSILQGQPYFSIDPKTGVIRTALPNMDREVKEQYQVLIQAKDM
GGQLGGLAGTTTVNITLTDVNDNPPRFPKSIFHLKVPESSHVGSAIGRIRAVDPDFGENA
EIEYNIVPGDGGNLFDITTDENTQEGVIKLKKPLDFETKKAYTFKVEASNLHLDHRFHSV
GPFKDTATVKINVLDMDEPPVFSKPMYTMEVYEDTPVGTIIGAVTAQDLDAGSSSVRYFI
DWKNDVDSYFTIDATEGTIATNELLDRESTAQYNFSILASKVSNPLLTSKVNVIINVLDV
NEFPPEISVPYETSVCENAKPGQVIQTVTAADKDLSPAGQRFSFRLSAEASNKPNFTVHD
YRNNTAGIETRRNGYSRRQQELYFLPVVIEDSSYPVQSSTNTVTIRVCRCDSDGTILSCN
VEAIFLPVGLSTGALIAILLCIVILLVIVVLYVALRRQKKKDTLMTSKEDIRDNVIHYDD
EGGGEEDTQAFDIGALRNPKVIEDNKMRRDIKPETLRFPRQRPPVEDNTDIRDFINQRLQ
ENDVDPTAPPYDSLATYAYEGNGSVAESLSSIDSITTEADQDYDYLSDWGPRFKILADMF
GEEESYNPDKVT
NT seq
2379 nt
NT seq
+upstream
nt +downstream
nt
atgcttacaaggaactgcttatccctgcttctctgggtcctgtttgatggaggtcttcta
acgccactgcatccacaaccacaacagactttaggagggccaagagaaaatgtcccagtg
ccagggagcagatcatctgcccagcgagtcaaacgaggctgggtgtggaatcagtttttt
gtgctggaggagtacatgggctctgaacctcagtatgtgggaaagcttcattctgacttg
gacaagggagtgggcacggttaaatataccctttcaggagatggtgctggaaccgttttt
accattgatgagaccacaggagacattcatgccataaggagcctagatcgagaagaaaaa
cctttctacacactccgagctcaggctgtggatgttgacaccaagaaaccactagagcct
gaatcagagttcatcatcaaagtgcaggacattaatgacaatgagccaaagttcctggat
ggaccttatgttgccagtgtcccagaaatgtctccagtaggtgcatatgtgcttcaagta
aaagcaacagatgctgatgatcccacttatggaaacagtgctagagtggtttacagcatt
cttcaggggcaaccgtatttctccattgatccaaagacaggtgtaataagaacagctttg
ccaaatatggacagagaagtgaaagaacaatatcaagttctaatccaagccaaggacatg
ggaggacaactgggaggactagctggtactaccactgtaaacattactctcacggatgtc
aatgacaacccacccagatttccaaagagtatcttccatttaaaagtacctgagtcctct
catgttggttctgctattggaaggatcagagctgtggatcctgattttggggaaaatgca
gaaattgagtacaacatagttccaggagatggaggaaacttgtttgacatcacaacagat
gagaatacccaggaaggagtcataaaactgaaaaagccattagactttgaaacaaaaaag
gcatatacttttaaagttgaggcctccaatctccatcttgaccatcgatttcactcagtg
ggtccattcaaagatactgccactgtgaagataaatgtgttggacatggatgaacctcca
gttttcagcaagcctatgtacacaatggaggtttatgaggatacacctgtggggaccatt
ataggtgcagtgacagcacaagacctcgatgctggcagcagctcagttagatacttcatt
gattggaagaatgatgtggacagctactttacaatagatgctactgagggaaccattgct
actaatgaattattggacagagaaagcacagcacagtacaatttctctatacttgcaagt
aaagttagtaacccactattaaccagcaaagtcaacgttataataaatgtcctggatgtc
aacgagtttcctcctgaaatttcagttccctatgagacatctgtatgtgaaaatgccaag
ccaggacaggtgatacagactgtcacagcagcagacaaagatttgtcaccagctggtcaa
aggttttccttcagactgtcagctgaagcttccaacaaaccaaatttcacagtccatgat
tacagaaacaacacagctgggattgaaaccaggagaaacggttacagcagaaggcagcaa
gagctctactttcttccagtagtaatagaagacagcagttaccctgtccagagcagcaca
aacacagtgactatccgtgtttgcagatgtgattctgatggcaccatcctgtcctgcaac
gtggaagcaatcttcctaccagtaggcctcagtacaggagcactgattgcaatcttgttg
tgcattgtaatactgctagtcattgtggtactgtatgtagcactacggaggcagaagaaa
aaggacaccctgatgacctctaaagaagacatcagagataatgttatccattatgatgat
gaaggaggtggagaagaggacacccaggcttttgacataggagccctgaggaatcccaag
gtgattgaagataacaaaatgcgtagggacataaaaccagaaaccttgcgttttccacgt
cagagaccaccagtagaagacaacacagacataagagatttcattaaccaaaggttgcag
gaaaatgatgtagatccaactgcccccccttatgactccttggcaacctacgcttatgaa
ggaaatggatctgtggcagagtctctgagctctatagactccataactacagaggcagac
caggattatgactatctgagtgactggggacctcgctttaagatcttggcagacatgttt
ggagaagaagaaagttataaccctgacaaagtcacttaa
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