KEGG   Chaetura pelagica (chimney swift): 104393019
Entry
104393019         CDS       T08631                                 
Symbol
KDM4B
Name
(RefSeq) lysine-specific demethylase 4B
  KO
K06709  [histone H3]-trimethyl-L-lysine9/36 demethylase [EC:1.14.11.66 1.14.11.69]
Organism
cpea  Chaetura pelagica (chimney swift)
Brite
KEGG Orthology (KO) [BR:cpea00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:cpea03036]
    104393019 (KDM4B)
Enzymes [BR:cpea01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.66  [histone H3]-trimethyl-L-lysine9 demethylase
     104393019 (KDM4B)
    1.14.11.69  [histone H3]-trimethyl-L-lysine36 demethylase
     104393019 (KDM4B)
Chromosome and associated proteins [BR:cpea03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    104393019 (KDM4B)
SSDB
Motif
Pfam: JmjC zf-HC5HC2H_2 Tudor_2 zf-HC5HC2H PHD_2 JmjN PHD SLX1_C DUF7141
Other DBs
NCBI-GeneID: 104393019
NCBI-ProteinID: XP_010000776
LinkDB
Position
Unknown
AA seq 1111 aa
MGSESLQNPGCKIMTFRPTLEEFRDFGKYIAYMESQGAHRAGIAKVIPPKEWKPRKTYDD
IDDMVIPAPIQQVVTGQSGLFTQYNIQKKAMTVGEYRRLANSEKYCTPRHQDFEDLERKY
WKNLTFVSPLYGADISGSLYDADVEEWNIGNLNTLLDMVEHECGIIIEGVNTPYLYFGMW
KTTFAWHTEDMDLYSINYLHFGEPKSWYAIPPEHGKRLERLAKGFFPGSSQGCDAFLRHK
MTLISPSILKKYGIPFDRITQEAGEFMITFPYGYHAGFNHGFNCAESTNFATLRWIDYGK
MATQCTCRKDMVKISMDVFVRILQPERYDLWKQGKDIAVLDHMKPTALTSPELDAWNETK
PELKAKVLRRIGDEEEDNKHRSHRKRSQPRRHKTEDQKSLGDVMAIETALEDVKVKEELK
RGADLEEEERTKVIEGEAGDCKVKARPPKVKGERKKKHLFHQHQHHLQGPQASLQQQQPP
LPNPPVPPQQLAEEEVPPARPPAPATVHTAEKSLPPAPLNIIQPLEAPVEEDDFKPRPII
PMLYVVPRTKKVVFDKERMSCQQAFEQFATQRSPGWREQTVPVDIPGKEEKAEVETPGIA
PAVSDVQTASAFSKMKMEIKKSRRHPLGKPPTRSPLSVVKQETSSDEETFPFSGEEDMSD
PEAMKSLLSLQWKNKAHNFPAERKFNAAAALSEPYCAVCTLFYPYNQSLQMVKEAVPVSV
GETTSFIHLSKCGQKTKPLIPEMCFTSSGENTEPLPSNSYIGEDGTSPLISCAKCCLQVH
ASCYGIRPDLVKEGWSCSRCSANAWAAECCLCNLRGGALQMTTDGRWVHLICAIAVPEAR
FLNVIERHPVDISAIPEQRWKLKCVYCRKRMKREAGACIQCSYEHCSTSFHVTCAHAAGV
PMEPDDWPYVVSITCFKHKAANQNIPFRREVTLGQTVITKNRNGLYYRCKVIGMTTQTFY
EVNFDDGSYSDNVYPESIISRDCIQLGPPPEGELVQLQWTDGIIYKAKFIAAQISQIYQV
EFEDGSQLMVKRGDIYTLEEELPKRVKSRLSLSTGAPQEEVFSGDEVRPAKRPRLGNPRH
PEEYGQNPDYLAFMESLLQTQYQHGTQSNMF
NT seq 3336 nt   +upstreamnt  +downstreamnt
atggggtcggaaagtctgcagaaccctggctgtaagatcatgacctttcgtcccaccctg
gaggagttccgggactttgggaagtacattgcttacatggaatcccaaggagctcaccgg
gcagggattgccaaggtgattcctcccaaggaatggaagccccgaaaaacctatgatgac
atagatgacatggttattccagctcctattcagcaggtggtgactggacagtcaggatta
ttcacccagtacaatatacagaagaaggcaatgactgtgggagaatatcgacgtctggcc
aacagtgagaagtattgcactccacgccatcaggattttgaagacttggagcgcaagtac
tggaagaacctcacgtttgtctccccactttatggagctgacatcagtggctcattatat
gatgcagatgtggaagaatggaatattggcaatctgaacaccctcttagacatggtggaa
catgagtgtggcatcatcatagaaggtgtgaacactccctacctctactttgggatgtgg
aagacaacttttgcttggcatacagaggacatggatctctacagtatcaactacttgcat
tttggggagccaaaatcctggtatgccatccctccagaacatggcaagaggttggaacgc
ctggcaaaaggatttttcccaggaagctctcagggatgtgatgctttcctccgtcacaag
atgaccctcatttcaccctccatcctgaagaagtatggcatcccttttgaccggatcacc
caggaagctggagagtttatgatcacctttccatatggttaccatgctggcttcaaccat
ggcttcaactgtgctgagtcaaccaactttgccactttgcgatggattgactatggaaaa
atggcaacccaatgcacctgccgcaaagacatggtgaagatttccatggatgtttttgtg
aggattctgcaaccagaacgttatgatttatggaaacaaggaaaagacattgctgtcctg
gaccatatgaaacccacagctctgactagcccagaactagatgcctggaatgagacaaaa
ccagaattgaaggctaaagtgcttcgcaggataggagatgaggaagaggacaacaaacac
cggtctcacagaaaaagaagtcaacccagaagacataaaacagaggatcagaagtctctt
ggagatgtcatggctattgaaactgccttggaagatgtgaaagtgaaggaggagctgaaa
agaggggcagatttagaggaagaggagagaaccaaagtgattgagggagaagcaggtgac
tgcaaagtgaaggcccgtcctccaaaagtaaaaggggagaggaagaagaagcaccttttc
catcaacaccagcaccacctgcaaggacctcaagcttctctgcagcagcagcagccgccg
ctgcccaacccaccggtcccaccgcagcagctggcagaggaggaggtgccaccagcacgg
ccaccagcacctgccacagtgcacacagcagaaaagagcctgcccccagctcccctgaac
atcatccagcccttggaggcaccagtggaggaggatgacttcaaacctcggcccatcatt
cccatgctctacgtggtgccacggaccaagaaggtggtgtttgacaaggagcgcatgtcc
tgccaacaggcttttgagcagtttgccacccagaggagtccaggctggagggagcaaact
gtccctgtggacatccctgggaaggaggagaaggcagaagtagaaactccagggatcgcc
ccagcggtcagtgatgtacagactgcttctgctttttcaaaaatgaagatggagataaag
aagagtcgtcgacatcccctgggcaaaccaccaacgcgctccccgttgtcggtggtgaaa
caggagacctcgagtgatgaggaaacatttccattttctggagaggaagatatgagtgac
ccagaggctatgaaatctttactttccctccagtggaagaataaagcacataatttccca
gctgaaagaaaattcaatgcagctgctgccctgagtgagccatactgtgctgtctgtacc
ctcttctacccctataaccagtccttacagatggttaaagaagctgtcccagtctctgtg
ggggagaccacctctttcatccacctttccaagtgtggacagaagaccaagcctctgatc
ccagagatgtgctttacctcaagtggagaaaacacagagcctcttccttcaaattcatac
attggagaggatggaaccagtcccttgatatcctgtgccaaatgctgcctgcaagttcat
gctagctgttatgggatacgtccagacctggtgaaggagggttggtcctgctcacggtgc
tcggccaacgcgtgggctgcggagtgttgcctatgcaatctcaggggaggagctcttcag
atgaccactgatgggcggtgggtccatctaatctgtgctattgctgttcctgaggcccgt
tttcttaacgtaatagagcgtcatcctgtggatatcagtgctattccagagcagagatgg
aaactgaaatgtgtgtactgcaggaagaggatgaagcgtgaggctggtgcctgcatccag
tgctcctacgagcactgctccacctccttccacgtcacctgcgctcacgcggccggggtg
cccatggagcccgacgactggccctacgttgtctccatcacctgcttcaaacacaaagca
gctaaccagaacattcccttccggagggaggtgacccttgggcagactgtgatcaccaag
aacaggaatggactctactacagatgtaaagtgattggcatgaccacacagaccttctat
gaagtgaactttgatgatggttcatacagtgacaacgtttacccagaaagcatcattagc
agagactgcatccagctgggaccccctccagagggtgagttggttcaactgcagtggaca
gatggaatcatctataaggccaagtttattgcagcccagatcagtcagatttaccaggtc
gagtttgaagatggttcccaactaatggtaaagcgtggggatatttacaccttggaggaa
gagcttcccaagagagtgaagtctcgcctgtccctcagcactggggctcctcaggaagag
gtattttcgggagatgaagtgagaccagccaagcgtccccggctggggaatcccagacat
cccgaagagtatggacaaaacccagattatttggcctttatggagagcctgttgcagaca
cagtaccagcatggaactcaaagcaacatgttttaa

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