Chaetura pelagica (chimney swift): 104393131
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Entry
104393131 CDS
T08631
Symbol
RBBP6
Name
(RefSeq) LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase RBBP6
KO
K10624
E3 ubiquitin-protein ligase RBBP6 [EC:
2.3.2.27
]
Organism
cpea
Chaetura pelagica (chimney swift)
Brite
KEGG Orthology (KO) [BR:
cpea00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cpea04121
]
104393131 (RBBP6)
Enzymes [BR:
cpea01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
104393131 (RBBP6)
Ubiquitin system [BR:
cpea04121
]
Ubiquitin ligases (E3)
U-box type E3
104393131 (RBBP6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-CCHC_2
U-box
zf-C3HC4_2
DWNN
zf-C3HC4_3
zf-CCHC
zf-RING_UBOX
zf-RING_2
zf-C3HC4
zf-RING_5
zf-C3HC4_4
Motif
Other DBs
NCBI-GeneID:
104393131
NCBI-ProteinID:
XP_010000899
LinkDB
All DBs
Position
Unknown
AA seq
1728 aa
AA seq
DB search
MGTSDAEYTDDSALIPKNSSVIVRRIPIGGVKATSKTYVISRTEPVSGTSKAIDDSSASI
SLAQLTKTANLAEANASEEDKIKAMMTQSGHEYDPINYMKKPLGPPPPSYTCFRCGKPGH
YIKNCPTNGDKNFESVPRIKKSTGIPRSFMMEVKDPNTKGAMLTNTGKYAIPTIDAEAYA
IGKKEKPPFLPEEPSSSSEEDDPIPDELLCLICKDIMTDAVVIPCCGNSYCDECIRTALL
ESEEHTCPTCHQTDVSPDALIANKFLRQAVNNFKNETGYTKRLRKQVQQTPQAPRPPPPP
PPPPPPPLMRQTITRNLQPLLRPAISRQQDPIMIPLASLASRSALSSLGPGPSPGLPVNP
SSVIVSDLPPAVSLSLRGEKPDGPFRDADTLLPPAALVSAAELSQSSPLSISSLLEEKGY
QVPVLRQPALPSLLGPQGQSIPTTGHPMRAGAIRSAGGRPGWELSNRGRPHSDRAQRTQA
PTLPASAPVFVPVPPPPLYPPPPHALPLPPGVPPPQFPPQFPPGQPPSAGYPVPPPGYPP
APANMSSAWVPAAVPAAHSNTIPTTQAPPLSREEFYREQRRLKEEEKKKSKLDEFTNDFA
KELMEYKKIQKERRRSFSRSKSPYSASSYSRSSYTYSKSRSGSSRSRSYSRSFSRSHSRS
YSRSPPYPRRGKGKSRNYRSRSRSHGYHRSRSRSPPYRRYHSRSRSPVFRGQSPTKRTVP
QGEAEREYFNRFREVPPYDMKAYYGRSVDFRDPFEKERYREWERNYREWYEKFYKGYAVG
AQPRPPVTRENFSPDRFGPPGTRRENSPYARGRREDYPGGQSHRNRNIAGNYPEKQSGRE
SHAIKDPTKSKEKEVENPLGDGKGNKHKKHRKRRKGDENEGFPSAELLEGARKPREPGAA
EDVKTDSLFMLPSRDDATPVRDEPMEADSIAFKPVSEKEKKEKEKPKAKADKTKRKVEVA
VPPKKDSTAKPAKASQEKAETDREKSPRAEPPVKKMKEELPKTESVKTSSSQKDEKALGT
PRKVHPKATKDHPETRPTKEEKAKKDHPKETKSEKPSNKEDKAKKPAEKGKPDAKPEKRK
RKADEKVDKEHEATSTKASKPETAESKPSPKGKSEPDGEKGERTPEKDKAGLLNNPAKKI
KLNRETGKKIVSGENVPPAKEPVEKPEPSSSKVKQEKAKGKARRKVATTDGSSSTLVDYT
STSSTGGSPIRKTEEKPDTKRTVIKTMEEYNNDNTAPAEDVIIMIQVPQSKWDKDDFESE
EEDIKSTQVPTNIGKPASVIKNVSAKPPNPIKHNEKETELLEKTQKMTKEASYESSQHDT
KSSKSSMSNEKGKTKDRDHSLSDKDTSEKRKTSLQPEKDHSERATEQGNGKSISQSSKDS
RSSEKHDTGRGSTAKDFTPNREKKSDHDGSRDHSSSKRRDEKSELARRKESPSRPRESTS
VQKSKPREERAEPPKKGAGDAKRSSHSPSRERKPAEHKAAHEPKRAVEEHKPPDKXKEKE
KEKETEKPVPEVKSNKEKEPAVNKPPVKQESPEVKAEKENVTGQNDKSLVKPKPQVSSSS
RLSSDLTRETDEAAFVPDYNESDSESNVSAKDEEAAGKNPKEPKEKAIVDKVKEEPAAPA
AAEQPEVSRSQSQSSPSVSRSRSQSPSESQTRSHSSSASSGESQDSKKKKKKKEKKKHKK
HKKHKKHKKHMGNETELEKSQKHKHKKKKSKKSKDKEKDDQKVKSVPT
NT seq
5187 nt
NT seq
+upstream
nt +downstream
nt
atgggaaccagtgatgcagaatacacagatgacagtgccctgattccgaagaactcatca
gtaattgtcaggaggatacctattgggggagttaaagctaccagcaaaacatatgttata
agtcgaactgagccagtgagtggaacatcaaaagcaattgatgactcttctgcatctatt
tctctggcccagcttactaagactgccaatctggctgaagccaatgcttccgaagaagat
aaaataaaagctatgatgacacagtctggccatgaatatgatccaatcaattacatgaag
aaacccttgggcccaccccctccctcatacacctgctttcgttgtggaaaacctggccac
tatataaagaactgcccaacaaatggggacaaaaatttcgagtctgttcccagaattaaa
aagagcacaggaattccaaggagtttcatgatggaggtgaaggatcccaacaccaagggt
gcaatgctgaccaacacggggaaatacgcgataccaactattgacgcggaagcttatgct
ataggaaagaaggaaaagcctcccttcttacctgaggagccatcctcctcctctgaagaa
gatgatcctattccagatgagttgttatgtctgatttgtaaagatataatgacggatgca
gttgttattccgtgctgtggaaacagttactgtgatgaatgtatcagaacagcattgctg
gagtctgaggagcatacctgcccaacttgtcatcagacagatgtttctccagatgcatta
attgccaacaagttcctacgccaggctgtgaacaactttaaaaacgaaactggctacaca
aaaaggctgcgtaagcaggttcagcagacgccccaagcgccccgcccgccaccaccaccg
ccacctccacctcctccacccctcatgagacaaaccatcacacgcaacctccagcctctg
ctccggccagccatttccaggcagcaggatccaataatgatcccattagcttctctggcc
tctcgttctgctttgtcatccttgggccctggtccgtcacctgggctgccagtaaatccg
tcttctgtcattgtctctgatctccctccagcagtgtccctgtctttgcgtggtgaaaag
ccagatggaccctttcgtgatgctgatactcttttacctcccgctgctctggtttctgct
gctgaactgtcacaatcttcccctctgtcgatcagcagtctgttggaagagaagggctat
caggtacctgtactgagacaaccagcactaccgagtcttctgggccctcaaggacaatca
atacccacaactggtcacccaatgagagctggtgccattcgctcagcaggaggcagacca
ggctgggaactctcaaatcgaggacgcccacatagtgatcgtgcccaaaggactcaggcc
ccaacactaccagcctcagcaccagtctttgtgcctgtgcctccacctcccctgtatcct
ccaccaccccacgcacttcctcttcctccgggggtaccaccaccacagtttcctcctcaa
tttccacctggtcagcctccatctgctgggtaccctgtcccccctccaggatacccccca
gctcctgcaaacatgtcatcagcttgggtaccagcagcagtaccagcggctcattcaaat
accatcccaacgacacaagcacctcccttatctagggaggagttttacagagagcagcgg
agactgaaagaggaggaaaagaaaaagtccaaacttgatgagtttacaaatgattttgct
aaggaattgatggaatataaaaagattcaaaaggagcgtaggcgttcgttttccaggtcc
aagtctccctatagtgcatcgtcctactccagaagctcctacacttactccaagtcacga
tcaggttcttcccgctctcgctcctactcccgctcctttagccgctcccactcccgctcc
tactcacggtcgccgccctatcccagaagaggcaaagggaagagccgcaactaccgctct
aggtcacggtctcatggttatcaccggtcaaggtcgagatcacccccttaccgaaggtac
cactcccggtcacggtctccagtcttcagaggccagtctcccactaaacggactgtaccc
cagggggaggcggaaagggaatattttaacaggttcagagaagttccaccgtacgacatg
aaagcttattacggcagatctgttgacttcagagatccctttgaaaaggagagatacaga
gaatgggaaaggaactacagggaatggtacgagaagttctacaaaggctatgctgttggt
gctcagcctcggcctccagtaacaagagagaacttttccccagataggtttggtccacct
gggacccgacgagaaaattcaccgtatgctcggggacgcagggaggattatcccgggggg
cagagccacagaaatcgtaacatagctggaaattaccctgaaaaacagtccggaagagag
agccatgccatcaaggatcctacaaaatcaaaagagaaagaggtggaaaacccattgggc
gatggcaaaggcaataaacataaaaaacaccggaagagaagaaaaggggatgagaatgaa
ggatttcccagtgcagagttgctagaaggtgcaagaaaaccaagagaaccaggtgcagca
gaagatgttaaaacagactctttgttcatgctgccaagcagagatgatgccacccctgtg
agagacgagccaatggaagcagattccattgctttcaaaccagtgtcagaaaaggagaaa
aaagagaaggagaagccaaaagcaaaagctgacaagacaaagcggaaagtcgaagtggcc
gttccccccaagaaagatagtacagcaaaaccagcaaaagcttctcaagagaaggcagaa
actgatcgagaaaaatctcctcgagcagaacctcctgtgaaaaaaatgaaggaggagttg
ccaaagacagagagtgttaaaacatcttcctctcagaaggatgagaaggctcttggtacc
ccacggaaagttcacccaaaagcaacaaaagatcacccagaaactaggccaaccaaggag
gaaaaagcaaagaaagaccatccaaaagaaaccaagtcagagaagccttccaacaaagag
gacaaggctaaaaaacctgctgaaaaaggcaaacctgatgcaaagcctgaaaaaagaaaa
aggaaagcagatgaaaaagttgacaaagaacatgaagccacttccacaaaggcctctaaa
ccagaaactgctgaatcaaaaccatcgccaaaggggaagtctgagcctgatggggaaaaa
ggagagagaacgccagagaaggataaagctggtttgcttaacaaccctgcaaaaaagatt
aaactcaaccgagaaactgggaaaaagattgtgagtggagaaaatgtgccacctgcaaaa
gaacctgttgagaaacctgagccaagcagtagcaaagttaaacaagaaaaagcaaaggga
aaagcgagaagaaaagtagcaacaaccgatggatctagttcaactcttgtagattacacc
agcaccagctctactggaggaagccccattagaaagactgaagaaaagccggatacaaaa
cggactgtcattaagaccatggaggagtataataatgataatacagcccctgctgaagat
gtcattattatgatccaggtccctcagtcaaagtgggataaagatgactttgagtctgaa
gaggaagacattaaatctacccaggtgcccacaaacataggaaaacctgccagtgttata
aaaaatgtgagtgctaagccaccaaaccccataaaacacaatgaaaaagagacagagctt
ttggagaaaacacagaaaatgacaaaagaggcaagttatgaaagctcccagcatgacact
aaaagttcaaaaagttctatgtcaaacgaaaaaggaaaaaccaaagaccgggatcattct
ttgtcagacaaggacacttctgagaagagaaagaccagcctccagccagaaaaagaccac
tcagaacgtgcaaccgaacaaggaaatggaaaaagcatttctcaatcttccaaagacagc
agatcttcagagaaacatgacactggccgtggatccactgctaaagattttactccaaac
agagagaaaaaatctgaccatgatggcagcagagatcattctagttccaagcgcagagat
gaaaagagcgaattagccaggaggaaagagtccccttctcgacccagagaatccacatca
gtccagaagagcaagccaagggaggagcgagcggagccgcccaagaagggcgctggagat
gccaagaggagcagccacagcccctcgcgggagcgcaagccggctgagcacaaagctgct
cacgagcccaagcgggcagtggaggagcacaaacctccagataaanngaaagagaaagag
aaagaaaaagagacagaaaagcctgtaccagaagtaaagagcaataaagagaaagagcca
gctgttaataaaccacctgtgaaacaagaatcaccagaggtaaaagctgagaaggagaat
gtgacggggcagaacgataaaagcctcgtcaagccgaagcctcaggtgagcagctcctcc
cggctctcctctgatctcacgcgagagactgatgaggctgcctttgtaccagactacaat
gaaagtgacagtgagagtaatgtatctgcaaaagatgaggaggctgcaggaaaaaatcca
aaggaaccgaaagaaaaggctattgtcgataaggtgaaagaggaaccagcagcacctgct
gcagctgagcagcctgaagtgagcagaagccagagccaaagcagccccagcgtgagccgc
agccgcagccagagcccctcggagagccagacccgcagccacagcagcagtgccagctca
ggagagagtcaagacagcaagaaaaagaaaaagaaaaaggagaagaagaagcacaagaag
cataagaaacacaagaagcataagaaacacatgggaaacgaaacagaattggaaaagagc
caaaaacacaaacacaagaagaaaaaatcgaagaagagcaaagataaagaaaaagatgac
caaaaagtgaaatctgtccctacatag
DBGET
integrated database retrieval system
