Chaetura pelagica (chimney swift): 104393302
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Entry
104393302 CDS
T08631
Symbol
RHBDL3
Name
(RefSeq) rhomboid-related protein 3
KO
K02857
rhomboid-related protein 1/2/3 [EC:
3.4.21.105
]
Organism
cpea
Chaetura pelagica (chimney swift)
Brite
KEGG Orthology (KO) [BR:
cpea00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
cpea01002
]
104393302 (RHBDL3)
Enzymes [BR:
cpea01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.21 Serine endopeptidases
3.4.21.105 rhomboid protease
104393302 (RHBDL3)
Peptidases and inhibitors [BR:
cpea01002
]
Serine peptidases
Family S54: Rhomboid family
104393302 (RHBDL3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rhomboid
EF-hand_7
EF-hand_1
EF-hand_6
DUF5580_M
EF-hand_11
EF-hand_8
AIF-1
EF-hand_9
Motif
Other DBs
NCBI-GeneID:
104393302
NCBI-ProteinID:
XP_010001084
LinkDB
All DBs
Position
Unknown
AA seq
393 aa
AA seq
DB search
MSCHLPAPESGMAGGEDRGKDPRWVAAGEAVPERFDPDNTGYISTEKFRSLLQRHGSELD
PHKLEVLLALADSNSEGRICYQDFVNLMSNKRSNSFRQAILQGNRRLCSKALLEETGLSL
SQRLIRHVAYETLPREIDRKWYYDSYTCCPPPWFMITVTIVEVAFFLYNGVVLDRFVLQV
THPLYLKNALLYHPQLRAQAWRYLTYIFMHAGIEHLGLNVVLQLLVGIPLEMVHGAARIS
FVYIAGVVAGSLAVSVADMTAPVVGSSGGVYALVSAHLANIVMNWSGMKCQFKLLRMAVA
LVCMSFEFGRAVWLRFHPSAYPPCPHPSFMAHLGGVMVGITLGVIILRNYEQRLQDQTLW
WIFLSIYVIFVLFAIFWNIFAYSLLDLKLPPPP
NT seq
1182 nt
NT seq
+upstream
nt +downstream
nt
atgtcctgccacctgcccgcacctgagagcgggatggcggggggcgaggacagaggaaag
gatccccgctgggtcgctgcgggggaggcggtgcccgagcggtttgatcctgacaacacc
ggctacatcagcactgagaagtttcgctcccttctccagagacacggctcagagctggat
ccccacaagctggaggtcctgctggccctggcagacagcaactctgaggggaggatctgc
taccaggactttgtcaacctgatgagcaacaaaaggtcaaatagtttccgccaggccatc
ctccaggggaacaggaggctgtgcagcaaggccctgctggaggagacagggctgagcctt
tcgcagaggctgatccggcacgtggcgtatgaaaccctgccccgggagatcgaccgcaag
tggtactatgacagctacacctgctgccctcccccctggttcatgattaccgtcactatt
gtagaggttgcattttttctttacaatggggtggtactggacagatttgtgcttcaagtc
acccatcccttatacctgaagaacgcactgctttaccatccccagctccgtgctcaggct
tggaggtacctaacctacatattcatgcatgcagggatagaacaccttggactcaatgtt
gttcttcagcttttggttgggattcccctggaaatggtgcacggagctgcaaggatcagt
tttgtgtacattgctggagttgtggcagggtccctggcagtgtcagtagctgatatgacc
gctcctgtggtgggctcctctggaggtgtgtatgctcttgtctcagctcacttggccaat
atagtcatgaactggtcaggaatgaagtgccagttcaagctgctgcgcatggccgttgcc
ttggtctgtatgagctttgaatttggaagagccgtgtggctgcgattccacccctccgct
tacccaccgtgcccacaccccagcttcatggctcacctgggtggggtgatggttggaatt
acccttggtgtcatcatcctgaggaactatgagcagagactccaagatcagacattatgg
tggattttcctttctatttatgtaatttttgtcttgtttgccattttctggaacattttt
gcctacagcctgttggatctgaagctacctccccctccttga
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