Chaetura pelagica (chimney swift): 104393307
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Entry
104393307 CDS
T08631
Symbol
DDX5
Name
(RefSeq) probable ATP-dependent RNA helicase DDX5
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
cpea
Chaetura pelagica (chimney swift)
Pathway
cpea03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cpea00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
104393307 (DDX5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cpea03041
]
104393307 (DDX5)
03009 Ribosome biogenesis [BR:
cpea03009
]
104393307 (DDX5)
Enzymes [BR:
cpea01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
104393307 (DDX5)
Spliceosome [BR:
cpea03041
]
Complex A
U1 snRNP components
U1 related factors
104393307 (DDX5)
Complex B
104393307 (DDX5)
Ribosome biogenesis [BR:
cpea03009
]
Eukaryotic type
Pre-60S particles
Helicases
104393307 (DDX5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
P68HR
ResIII
Helicase_C_2
Cas3-like_C_2
ERCC3_RAD25_C
BNIP2
Motif
Other DBs
NCBI-GeneID:
104393307
NCBI-ProteinID:
XP_010001089
LinkDB
All DBs
Position
Unknown
AA seq
598 aa
AA seq
DB search
MGVSHGFGAPRFGGSRGGPLSGKKFGNPGEKLTKKKWNLDELPKFEKNFYQEHPDVVRRT
VQEVEQYRASKEVTVRGHNCPKPIINFYEANFPANVMEVIQRQNFTEPTAIQAQGWPVAL
SGLDMVGVAQTGSGKTLSYLLPAIVHINHQPFLERGDGPICLVLAPTRELAQQVQQVAAE
YSRACRLKSTCIYGGAPKGPQIRDLERGVEICIATPGRLIDFLEAGKTNLRRCTYLVLDE
ADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVRQLAEDFLKEYVHINIGALELSA
NHNILQIVDVCHDVEKDDKLIRLMEEIMSEKENKTIVFVETKRRCDDLTRKMRRDGWPAM
GIHGDKSQQERDWVLNEFKHGKAPILIATDVASRGLDVEDVKFVINYDYPNSSEDYIHRI
GRTARSTKTGTAYTFFTPNNIKQVNDLISVLREANQAINPKLLQLIEDRGSGRSRGDRRD
RYSAGKRGGFSSFRERENFERNYGPLGKRDFGAKTQNGAYTAQSFSNGTPFGNGFAAAGM
QAGFRAGTPAGAYQNGYEQQYGSNIANMHNGMNQQQYAYPATGAAPMIGYPMPTSYSQ
NT seq
1797 nt
NT seq
+upstream
nt +downstream
nt
atgggagtgtcacatgggtttggagctccccgttttggaggaagtagaggtggacccctc
tctgggaagaaatttggaaaccctggggaaaaacttacaaaaaagaaatggaatttagat
gagctgcccaaatttgagaagaacttctatcaagaacatcctgatgtagttagacgtact
gtgcaagaagttgaacaatacagagcaagcaaagaagtcacagttaggggccataactgt
ccaaaaccaattataaacttctatgaagctaactttcctgcaaatgtaatggaagtaatt
cagaggcagaacttcactgaaccaactgctattcaagcacaaggatggcctgttgccttg
agtgggttggatatggttggagtggcacagactggatcagggaaaacactgtcttacttg
ttgcctgctattgtgcatataaatcaccagccattcctggagcgaggagatggacctatt
tgtctcgtgctggcaccaactcgtgagctggctcaacaagtgcagcaagtggctgctgaa
tatagcagagcatgtcgtttgaagtccacatgtatctatggaggtgctccaaagggacca
cagatccgtgacttagaaagaggtgtggaaatctgtattgcaacacctggaagacttata
gacttcttagaagctggaaagaccaatctcaggagatgtacttaccttgtccttgatgaa
gctgacaggatgcttgacatgggatttgaacctcagatcagaaaaattgtggatcagata
agacctgacaggcagactctcatgtggagtgccacatggccaaaggaagtaaggcagctg
gctgaagacttcttgaaagaatatgtacacatcaacattggtgcgttggaactgagtgca
aaccacaacatcctgcagattgtggatgtgtgtcatgatgtagagaaagatgacaaactt
attcgtctgatggaagaaataatgagcgagaaggaaaacaaaacaattgtttttgtggaa
acaaaaagacggtgcgatgatctcaccaggaagatgaggagagatgggtggccagcgatg
ggtattcatggagataaaagccagcaggaacgggactgggttctaaatgaattcaaacac
gggaaagcaccaatcctgattgctacagatgttgcatccagaggtctagatgtggaagat
gtgaaatttgtcatcaattatgactaccctaactcctcagaggactatatccaccgaatt
ggacgaactgcccgcagtaccaaaacaggcacagcatacacattctttactcctaacaat
attaagcaagtaaatgacctcatctctgtgcttcgggaggctaatcaagccatcaacccc
aaattgcttcagttgattgaagacagaggttcaggtcgttcccgaggtgatcgccgtgac
agatactctgcgggcaaaaggggtggatttagtagttttagagagagggagaactttgag
agaaactatggtccactaggaaagagagactttggagcaaaaactcaaaatggggcctac
actgcccagagtttcagtaatggaacaccttttgggaatggctttgcagctgcaggcatg
caggctggcttcagggctggtacccctgccggggcgtatcagaacggctacgagcagcag
tacggcagtaacattgccaacatgcacaatggcatgaaccagcagcagtatgcataccct
gccactggtgctgctcccatgatagggtacccaatgcccacaagttattcccaataa
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