Chaetura pelagica (chimney swift): 104393637
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Entry
104393637 CDS
T08631
Symbol
SH3TC1
Name
(RefSeq) LOW QUALITY PROTEIN: SH3 domain and tetratricopeptide repeat-containing protein 1
KO
K24313
SH3 domain and tetratricopeptide repeat-containing protein
Organism
cpea
Chaetura pelagica (chimney swift)
Brite
KEGG Orthology (KO) [BR:
cpea00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cpea04131
]
104393637 (SH3TC1)
Membrane trafficking [BR:
cpea04131
]
Protein recycling
Rab GTPases and associated proteins
Rab11 associated proteins
104393637 (SH3TC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_12
TPR_10
TPR_8
SH3_1
TPR_2
TPR_1
SH3_2
Csd3_N
TPR_NPHP3
Motif
Other DBs
NCBI-GeneID:
104393637
NCBI-ProteinID:
XP_010001449
LinkDB
All DBs
Position
Unknown
AA seq
1308 aa
AA seq
DB search
MESSAVAGSAPMLSTNSIIPGLEGEEDRNLERKQMEQGRCRSGWICGEVNAATSTIRMDT
LQKQMECSESETCTNISSRTLPNQAENFPTDISLKLTMVRRKSGCPDPRLQRQLRGQLRL
VENDSREVTAVFSELSARLLSIHSDEDLIVVTFKTFEEIWKFLTYHSLGFINHCMENLFL
DQSFWLYSQEEEETGIEVCINEKSLHLMYRSLLVQEGAFFVSCPDNLIRKILVTDNEINT
YFETGAFTEDVTGGSMDGDVTVLINASLEPLIPFHQWFLKGCSNSIDLRCKTESKSTMKV
AMGSCLAVMDYESSVLEEMSFQEGDKIEIIGYFIECVEWFLGRHVFTGQIGFAKTSHVKL
DLPKNKPQDLDFLEADELSFFSNDNNLEEVIHLLKQTSITDICSVYRIDQIEEPEFQKDH
ESEIQCSHSSMGSTSNNRKIEEFLRNFKNLEAAQAEEPTTEGKDQDDDQASDTFESLLLF
LNREEYDRNFKALYDYSYPFINSMFYGFSEEEQLVSFFRLAREAAKKASMSWALARLCFV
LGRLSVKKLKFSQARVYFEEALGVVAGGFSDLYFVIALYTNLTIIYLTQKNKEKCAHIFD
KATALLMGIPNYICSADLESDILKYALKRTILRQNKHAEARACFLLAKHYSARKQHEEAL
PFLERFQLLLNELGFQNNLSNKCYFKLAQLYNKKCLPHIVLSCIKVTSSQSSSALIDSLK
RIDLVIKNAPKLYGVRKLRQIHPSQIVPYLIQALSSVFTNEQQGLCCTIHLSLAKLYSHH
KQYGKAIVHMIKALDSDVSAKPEEAISYLVSLAWLYILYKQYDVALAILNAVVDSSWSTL
QQLGVAYNMLAIALKRTNNTKQAAESYYKALCLSEETSMTHNQAIALANFAALCLHAAAS
KLAEHYYIKAVKLFSKLPNLDCGQDFIQVLLQLGCYYVGRKQREKGRFYYEWAFLVAMEI
SHLESQLQAIKLLCQFYSTVAPNEAQCVIYNEYQLSLARKMSNKALEGQILETISQLYLS
LGTERAYRSALECTKRSLGIFIDLQKKEREAYAWLRAGKIYYVLRQNELVDLYIQVAQDA
ALYTGDPNFGMELFEAAGDIFFNGTWEKEKAVTFYRDRALPLAVKTGNKPTELRLCNKLV
ELLVTLKAYEESLEYARASLMLSVSLGNQLNERIAYHRLAAIHHHLGHCELAEHFYLKAL
SLCSSPLEFEEETLYYVKVYLILGDIIFYDLKDPFDAAGYYHLALAAAMDLGNKKAQLKI
YTRLAVIYHNFLVDREMSLFFYQKARTFATELNVRRINLAPDQCYKSS
NT seq
3927 nt
NT seq
+upstream
nt +downstream
nt
atggagagttcagcagtggcaggcagtgcacccatgctcagcacaaacagcatcatccct
ggtctagagggagaagaagacaggaacttggagaggaaacaaatggagcagggaaggtgc
aggtctggctggatctgtggggaggtgaatgctgccaccagcaccatcaggatggacaca
ctgcaaaaacaaatggagtgttctgaaagtgaaacatgcacaaatatcagttcaaggacc
cttcccaatcaagcagagaattttccaactgatatctccttgaagttaacaatggtaaga
cgaaagagtggatgtcctgatcccagactccaaagacagctcagagggcagctccgtctt
gtggaaaatgacagtagggaggtgacagcagttttcagtgagctctctgccagactgctg
tctattcatagtgatgaagatctaatagtggtgacatttaaaacttttgaagaaatatgg
aagtttctaacctaccattcactgggttttataaatcactgcatggaaaacttattccta
gaccaatctttttggctgtattctcaagaggaggaagaaacaggcattgaagtctgtata
aatgaaaaatcattacatttgatgtacagaagcctgctagtacaggaaggggcgtttttt
gtttcatgtcctgacaatctgataagaaagatattggttacagacaatgaaataaatact
tattttgaaactggggcttttactgaagatgtaacaggtggatctatggatggtgatgtg
actgtgctgattaatgcttctctggagccattgattccttttcatcaatggtttcttaaa
gggtgttctaattccattgaccttagatgcaaaactgaatccaaatccaccatgaaagtt
gcaatgggatcttgccttgctgtgatggattatgaaagtagtgtgttggaagagatgagt
ttccaggaaggggacaaaattgagatcattggctacttcattgaatgcgtggaatggttt
cttggaagacatgtgtttactggccaaataggttttgcaaagacaagtcatgttaaactg
gacttacctaaaaataaaccgcaagacctggattttcttgaagcagatgagctgtcattt
ttttcaaatgacaacaatttggaagaagtgatacatttgttaaaacaaacctccatcaca
gatatttgctctgtgtaccgaattgaccaaatagaagaaccagaatttcagaaagatcat
gaatctgaaattcagtgttcacattctagcatgggatccactagcaacaacagaaagata
gaagaattcttgaggaacttcaagaatttggaggccgctcaggcagaagagccaactaca
gaaggaaaggatcaagatgatgatcaagcatctgacacttttgagtcattgttactcttc
ttaaacagggaagagtatgacagaaacttcaaagcactgtatgattactcttacccattt
atcaacagcatgttttatgggttttctgaagaagaacaactagttagcttttttagatta
gcaagggaagcagcaaagaaagcaagtatgtcctgggctctagcacggttgtgctttgtc
ctaggcaggcttagtgttaaaaagctgaagttttcccaagctcgggtgtattttgaggaa
gcattgggagtagtagctggagggtttagtgatttgtactttgtaattgctctttataca
aatctaacaattatctacttgacacagaagaacaaagaaaaatgtgctcatatttttgac
aaggctacagctcttctcatggggattcccaactatatttgcagtgctgacctggagtca
gatattctaaagtatgctctgaagaggacaattctgaggcagaacaagcatgcagaggca
agggcatgctttctactggcaaaacattacagtgcacgcaaacagcatgaagaggcacta
ccattcttggaaaggtttcaactgttgcttaatgagctgggtttccaaaacaacttatca
aacaagtgttatttcaaactagcacagttgtacaacaaaaagtgtttgccacacattgta
ttaagctgcataaaggtcacctcttcccagagctccagtgctttaatagattccttgaaa
aggattgatttagtaatcaaaaatgctcccaagctctatggtgtgagaaaactcagacaa
atacacccatcccaaattgtaccttacctcatacaagcactttcctctgtgtttactaat
gagcagcaaggactatgctgcactattcatcttagcttagcaaaactgtacagccaccac
aaacagtatggaaaagctattgttcacatgatcaaagcactggactctgatgtttctgct
aagccagaagaagctattagctatctggtttcacttgcttggttatacattctttacaaa
caatatgatgtggctttagccattttaaatgctgttgtagactcttcatggagcactctt
caacaactaggtgtagcttataacatgcttgctattgctttgaaaagaacaaacaataca
aaacaagctgctgagagctactacaaagcattgtgcctttcagaagagaccagtatgacc
cataaccaagctatagccctagctaattttgcggcactatgcctgcatgcagcagccagc
aagctggcagaacattattatatcaaggcagtgaagctattctccaaacttccaaatctg
gactgtggccaagacttcatccaggtcctccttcagttgggatgctactatgttggtaga
aaacaaagagagaaaggaaggttttattatgaatgggcctttttagttgcaatggagata
agtcatctggaaagtcaactgcaagccattaaacttctgtgtcagttctacagtacagtt
gctcccaatgaggctcagtgtgtcatctacaacgagtatcaactatctttagctagaaag
atgtccaacaaagctttggagggacaaattttggaaaccattagtcagctctatttatct
ttaggaacagaaagggcttacaggtcagctttggaatgtactaaaagaagccttgggata
tttatagatctccagaaaaaagagagagaagcatatgcttggctacgagcaggaaagata
tattatgttctgaggcagaatgagcttgtggatctttatattcaggttgctcaggatgct
gctctttacacaggtgatccaaactttggaatggaattgtttgaagctgctggagacata
tttttcaatggtacttgggaaaaggagaaggcagtgactttctacagggacagggctctt
ccacttgctgttaagactggcaacaaacccactgagctcagactatgcaataaattggtg
gaattgctggtgactctgaaggcttatgaggaaagtctggaatatgcacgagcatctctt
atgctcagtgtaagtttaggaaaccagctaaatgaacgaatagcttaccatcgcctggct
gccatccaccatcatttgggtcactgtgaactagctgaacacttttatttaaaggccttg
tccctctgctcctctcctctagagtttgaggaggaaacactgtattatgtcaaggtgtac
ttgatcttaggagacataatattctatgaccttaaggatccctttgatgcagcaggctac
tatcatttggcacttgctgctgccatggatctgggcaataaaaaagctcagctgaagatt
tacacaagacttgcagtcatctaccataatttccttgtggatcgagaaatgtctctcttc
ttctaccaaaaggcaagaacctttgcaactgagctgaatgttaggagaataaatctagct
cctgatcaatgttacaagagttcataa
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integrated database retrieval system
