Chaetura pelagica (chimney swift): 104393767
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Entry
104393767 CDS
T08631
Symbol
ERCC4
Name
(RefSeq) DNA repair endonuclease XPF
KO
K10848
DNA excision repair protein ERCC-4 [EC:3.1.-.-]
Organism
cpea
Chaetura pelagica (chimney swift)
Pathway
cpea03420
Nucleotide excision repair
cpea03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
cpea00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
104393767 (ERCC4)
03460 Fanconi anemia pathway
104393767 (ERCC4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cpea03032
]
104393767 (ERCC4)
03400 DNA repair and recombination proteins [BR:
cpea03400
]
104393767 (ERCC4)
DNA replication proteins [BR:
cpea03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
104393767 (ERCC4)
DNA repair and recombination proteins [BR:
cpea03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
Other NER factors
104393767 (ERCC4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ERCC4
HHH_5
Motif
Other DBs
NCBI-GeneID:
104393767
NCBI-ProteinID:
XP_010001588
LinkDB
All DBs
Position
Unknown
AA seq
925 aa
AA seq
DB search
MQVIIRPPRICSTTPFIRCDHVEVKRPGNAFLRHANTGLSWGADNGLCQLLLKAGVRGPS
PRREGTALSELTDLGTLKHEEYFIDQLRSDGVVHLPRRVTNEIANNTRYEFYTQGGVIFA
TSRILVVDFLTDRIPANLITGILVYKAHRIIESCQEAFILRLYRQKNKQGFIKAFTDNAV
AFNTGFCHVERVMRNLFVKKLYLWPRFHIAVNSFLEKHKPEVVEIHVSMTPAMLAIQTSV
LDILNACLRELKRCNPALEVEDLSLENAIGKPFDKTIRHYLDPLWHQLGAKTKSLVQDLK
ILRTLLLYLTQYDCVTFLNLLESLKASEKAFGENSGWLFLDSSTSMFVNARARVYRIADE
KLNQKGKVSEKSDVKKENELKRELVLESNPKWEALREVLKEIENENKSSEDLGGPGQVLI
CASDDRVCAQLREYIIAGAEAFLTRLYNKTFGKDEKATEVWIKDRKAVKSKGNARPDTGP
QAKKPKLMASSKQNKHKKQQDRTITQMMGKTEEEKREELEVEDNKELSSSQEGSIEEIVA
EDFHVNLPSDCYYGIFKNPLTIIHPLQGCNDPYALTRVLHELEPRYVVLYDAELTFVRQL
EIYKASRPGKPLRVYFLIYGGSTEEQRYLTALRKEKEAFEKLIREKAGMVVPEEREGRDD
TNLELVRGAKSASASTDTRKAGGQEEKTVQQTVIVDMREFRSELPSLIHRRGIDIEPVTL
EVGDYILTPEICVERKSISDLIGSLNNGRLYSQCVSMSRYYKRPILLIEFDPNKPFSLIP
RGSLHQEISSSDITSKLTLLTLHFPKLRILWCPSPHATAELFEELKQNYPQPDAETAMAV
TADSEILPESDKYNPGPQDFLLKMPGINAKNCRALMNHVKSIAELVTLSKDELSKILGNA
ANATQLFDFIHLTYGEAISQGKSKR
NT seq
2778 nt
NT seq
+upstream
nt +downstream
nt
atgcaagtaataatccgacctccaagaatttgttctactacacctttcatacggtgtgac
cacgttgaagtaaagaggccaggcaatgcctttttaaggcacgcaaatacaggcctgtct
tggggggctgataacgggctgtgccagctgcttctgaaagcaggtgtgaggggcccctcg
ccccggcgggaaggaactgccctctccgagctgactgacctcgggacgctaaaacatgag
gagtattttattgatcagctgaggtcagatggagttgttcatcttcctcggcgtgttacc
aatgaaattgcaaataatactcgatatgaattttacacacaaggaggagtcatctttgca
acaagtcgaatccttgtggttgattttctcactgacaggattcctgcaaatctcattact
ggcattttggtatacaaagcacatagaatcatcgagtcctgtcaggaggcatttatcttg
cgcctgtatcgccagaagaacaagcaaggcttcatcaaagcttttacagataatgcagtt
gcatttaacactggcttttgccatgtngaaagagtgatgagaaatctttttgtcaagaaa
ctttatctgtggcccagatttcatatagcagtgaactcatttttagagaagcataaacct
gaagtagtggaaatacatgtgtcaatgacccctgctatgcttgctatccagacttcagtc
ctggacattttgaacgcttgtctgagagaactcaaacgttgtaatccagctcttgaagta
gaagatctttctttagaaaatgctattggtaaaccttttgacaagacaatacgtcactat
ttagatcctctctggcatcaacttggagctaagacaaaatctttggtccaggatttgaag
atactacgtactttgctgctgtatttaactcagtatgattgtgtcactttcctaaatctt
ctggagtcactgaaagcaagtgaaaaagcttttggtgagaattcaggttggctgtttctt
gactccagtacttcaatgtttgtaaatgctcgagctagagtttatcgcattgcagatgag
aaactgaatcagaagggcaaagtctctgaaaaaagtgatgtaaagaaggaaaatgaactg
aaaagggaattagttctagaaagtaacccaaaatgggaggctttgagagaagtgctgaaa
gagattgaaaatgagaataagagcagtgaagaccttggtggtccagggcaagtgcttatt
tgtgccagcgatgaccgagtttgtgcacagctcagggagtacattattgctggagcagaa
gcttttttaacaagactgtataacaagacctttggaaaagatgagaaagctacagaagtg
tggattaaggacagaaaagctgtcaagtccaaaggaaatgccagaccagacacaggccct
caagccaaaaaacccaaactcatggcttcttcaaaacaaaataaacacaagaagcagcaa
gaccggactataacccaaatgatggggaaaactgaggaggaaaagagagaggagttagag
gtggaagataacaaagaattaagtagtagccaagaaggcagtattgaagagatcgttgct
gaagatttccacgtgaacttaccctccgattgttactatggtattttcaagaacccgctc
accattattcatccactgcaagggtgcaatgatccctatgcactcactcgggtgctgcat
gaactggaaccaagatacgttgtcttatatgatgcagaactaacttttgtccggcagctg
gaaatctacaaggcaagcaggcctgggaagcctttgagagtctatttcctcatatacggg
ggctccacagaagagcagcgctacctcacagctctgagaaaagagaaggaggcctttgaa
aaactcattcgagagaaggctggcatggttgttcctgaagaaagagaaggaagagatgac
acaaacttagaactagtaagaggtgctaaatctgcctctgcttctactgacacacgcaaa
gcaggtggacaggaagagaagactgttcagcaaactgtaatagtggatatgcgggagttt
cgtagtgagcttccatcactgattcatcgtcgtggtattgacattgagcctgttactttg
gaagttggagattatattttaactcctgagatctgtgtagagcggaaaagtatcagtgac
ctgataggttccttaaacaatggaagactgtactcacaatgcgtttctatgtcccgatac
tataagcgaccaattctcctgattgaatttgatcctaacaaacctttctccttgattcca
cgaggctctctacatcaggaaatttccagtagtgatattacttctaaactaacccttctt
actctgcatttcccaaagttacgtatcctgtggtgtccttctccccatgctactgctgaa
ctgtttgaagagttaaaacaaaactatccccagcctgacgcagaaacagcaatggctgtc
acagcagattctgaaattcttcctgagtcagacaagtacaaccctggtcctcaggacttt
ctactaaaaatgccaggtatcaatgccaaaaactgccgtgccttaatgaaccacgttaaa
agcatagcagagctagtgacactgtcaaaggatgaactctccaaaattttgggtaatgct
gccaatgccacacaactctttgactttattcacttgacctatggagaggcaatatcgcaa
ggaaaaagcaaaagatga
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