Chaetura pelagica (chimney swift): 104393827
Help
Entry
104393827 CDS
T08631
Symbol
CNTN4
Name
(RefSeq) LOW QUALITY PROTEIN: contactin-4
KO
K06762
contactin 4
Organism
cpea
Chaetura pelagica (chimney swift)
Brite
KEGG Orthology (KO) [BR:
cpea00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
cpea04515
]
104393827 (CNTN4)
Cell adhesion molecules [BR:
cpea04515
]
Immunoglobulin superfamily
Contactins
104393827 (CNTN4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ig_3
I-set
ig
Ig_2
fn3
V-set
Sp38
V-set_CD47
Ig_C17orf99
Pur_ac_phosph_N
Tissue_fac
C2-set_2
Motif
Other DBs
NCBI-GeneID:
104393827
NCBI-ProteinID:
XP_010001649
LinkDB
All DBs
Position
Unknown
AA seq
957 aa
AA seq
DB search
MGMDFRYRVVEGNLLINNPNKTQDTGTYQCVATNPFGTIVSREAKLQFAYLENFKTRTRS
TVSVRQGQGMVLLCGPPPHSGELTYAWIFNEYPTFVHQDNRRFVSQETGNLYIAKVEASD
VGNYTCVVTNTVTNSRVLGPPTPLILRNDGVMGEYEPKIEVQFPETVPSAKGTTVKLECF
ALGNPVPTISWRRADGKQIPRKAKRHRSSGLLEIPNXXXXXXXXXXXXXXVRGKNVARGQ
LTFYAQPSWIQTISDAHAAIEERVSWECRASGRPKPSYRWLKDGQLLQPQGRVQLEQGSL
TITNVSLSDAGMYQCVAENRHGIIFASAELSVIAIGPDFSKTLLKKLTLVKVGGEVIIEC
KPKASPRPTYSWKKGKDILRENERITVLEDGSLRIVNVTKSDAGSYTCVATNHFGTASST
GSLVVKDPTRVMVSPFSMDVTVGESIVLPCQVSHDHSLDIMFTWTFNGHLIDFEKDGDHF
ERVGGDSAGDLMIRSIQLKHAGKYVCMVQTSVDKLSAAADLIVRGPPGPPEAVTIDEITD
TTAQLSWRPGADNHSPITMYVVQARTPFSVGWQAVSTVPEIIDGRTFTATVVGLNPWVEY
EFRVVAANLIGIGEPSRPSEKRRTEEALPEVTPANVSGGGGSKSELVITWETVPEELQNG
GGFGYVVAFRPFGTVSWMQTVVASPDAARYVFRNESLPPFSPYEVKVGVYNNKGEGSFSP
VTVVYSAEEEPTRAPTTVLARSLSASDVEVSWAPPRETQHKGRIQGYEVRCWRHDEKEEN
AKRVRTVGNQTSTKVTNLRGNALYHLAVRAYNTAGTGPASAAVNVTTKKPPPSQPPGNVI
WNSSDSKIILNWDQVKALDNESEVRGYKVLYRWNRQSSTSVIETNKTSVELSLPFNEDYI
IEIKPFSDGGDGSSSEQIRIPKISNAYVRGSGSSTSKACTLSAISTIMISLTARSSL
NT seq
2874 nt
NT seq
+upstream
nt +downstream
nt
atggggatggatttccgctaccgcgtggtggaaggcaacctgttgatcaataatcccaat
aaaacccaagatactggaacataccagtgtgtagcaacaaacccctttggaacaattgtc
agcagagaagcaaagcttcagtttgcttatcttgagaacttcaaaaccaggacgagaagc
acggtgtccgtccggcagggccagggcatggtgctgctgtgtgggccaccaccacattct
ggagagctcacctatgcgtggatcttcaacgagtacccgaccttcgtacaccaggacaac
cgccgcttcgtttcccaggagactgggaacttgtacattgccaaggtggaagcttcagac
gtgggcaactacacgtgtgtggtgaccaacacggtcaccaacagcagggtcctgggtccc
cccaccccactcatcctcaggaacgatggggtgatgggagagtatgagccaaaaatagaa
gtgcagttcccagaaacagttccatctgcaaaaggaacaacggtgaaactggagtgcttt
gccttggggaacccagttcctacgatcagctggaggagagcagatgggaaacagatcccc
agaaaagccaagagacacagatcaagtggacttcttgaaatcccaaatnttnnnnnnnnn
nnnnnnnnnnnnnnnnnnnnnnnnnnnnncgtgagagggaaaaacgtggcccgaggacaa
ctgacattctatgctcagcccagctggatccagaccatcagcgatgcccacgcggccatc
gaggagcgcgtgtcctgggagtgccgggccagcgggcggcccaagccctcctaccgctgg
ctgaaggatgggcagctgctgcagccccagggcagagttcagctggagcagggctcactc
accataaccaacgtcagcctgtcagatgctggcatgtatcagtgtgtagctgaaaacaga
cacggcatcatctttgccagtgcagaactgagtgtcatagccattggtccagacttttcc
aaaacactcctgaagaagttaactcttgttaaagtgggtggtgaagtaatcattgagtgt
aagccgaaagcttccccgagacctacttattcttggaagaaaggaaaagatatcctgaga
gaaaatgagaggatcactgttttggaggatgggagcctgcggattgtgaatgtcaccaag
tctgatgcaggaagttacacctgtgtggcaacaaaccactttgggacagccagcagcacg
ggcagcttggttgtgaaagatccaacccgggttatggtgtcccccttcagcatggatgtc
actgttggagagagcattgtcttgccttgtcaggtatctcacgatcactcactagatatc
atgttcacctggacattcaatggacacctgatagactttgaaaaagatggggatcacttt
gaaagagttggaggggattcagctggtgatttgatgatcagaagcatccagctgaagcat
gctgggaagtacgtctgcatggtgcaaacaagtgtggacaagctatcagctgctgcagac
ctgattgtaagaggtcccccaggcccaccagaagctgtgacaatagatgaaatcactgac
accacagctcagctgtcctggaggccaggagcagacaaccacagccccatcaccatgtat
gttgtgcaagcaaggacccccttctcagtgggatggcaagctgtgagcacagttccagag
atcatcgatggcaggaccttcacagccacagtggtgggtttgaacccttgggttgagtat
gaatttcgagtagtggctgccaacctgattggcattggagaacccagcagaccttccgag
aagagaagaactgaagaagctctccctgaggtgaccccagccaacgtcagcggtggcggc
gggagcaagtctgagctggtcatcacctgggagaccgtgcccgaggagctgcagaacgga
ggcgggttcgggtacgtggtggcgttccggcccttcggcaccgtcagctggatgcagacc
gtggtggcctccccggacgccgcccgatacgtcttccgcaacgagagcctcccgcccttc
tccccctacgaggtgaaagtgggggtgtacaacaacaagggggaaggctccttcagcccc
gtgaccgtcgtctactcagcagaggaagagccgacgagagccccaaccactgttttggcc
agaagtctttctgcctcagatgttgaagtttcttgggctccccccagagagacccagcac
aaaggaagaatacagggatatgaggtcaggtgctggagacacgacgaaaaggaagagaac
gccaagagggtccgaacagttgggaaccaaacgtccaccaaggtgaccaacctgcgcggc
aacgcgctctaccacctggcagtgagggcctacaacacggccgggaccggccccgccagc
gccgccgtcaacgtcaccaccaaaaagccaccaccgagccagccccctgggaatgtcata
tggaattcatctgactccaagatcatactgaactgggaccaagtgaaagcactggacaat
gagtcagaagtgagaggctacaaagttttgtacaggtggaacaggcagagcagcacgtcg
gtcatagaaacgaataaaacctcggtggagctctccctgcccttcaacgaggactacatc
atcgagatcaagcccttcagcgacggcggcgacggcagcagcagcgaacaaatccgaatc
ccaaagatctcaaacgcgtacgtgagaggatcgggctcctcgacctccaaggcctgcacc
ctctcagccatcagcaccatcatgatctcgctcacagctcgctccagtttatga
DBGET
integrated database retrieval system
