KEGG   Chaetura pelagica (chimney swift): 104393859
Entry
104393859         CDS       T08631                                 
Symbol
SEC13
Name
(RefSeq) protein SEC13 homolog
  KO
K14004  protein transport protein SEC13
Organism
cpea  Chaetura pelagica (chimney swift)
Pathway
cpea03013  Nucleocytoplasmic transport
cpea04141  Protein processing in endoplasmic reticulum
cpea04150  mTOR signaling pathway
Brite
KEGG Orthology (KO) [BR:cpea00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    104393859 (SEC13)
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    104393859 (SEC13)
 09130 Environmental Information Processing
  09132 Signal transduction
   04150 mTOR signaling pathway
    104393859 (SEC13)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cpea03019]
    104393859 (SEC13)
   04131 Membrane trafficking [BR:cpea04131]
    104393859 (SEC13)
Messenger RNA biogenesis [BR:cpea03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     104393859 (SEC13)
Membrane trafficking [BR:cpea04131]
 Protein recycling
  Rab GTPases and associated proteins
   Rab11 associated proteins
    104393859 (SEC13)
 Endoplasmic reticulum (ER) - Golgi transport
  Forward pathways
   Coat protein complex II (COP-II)
    104393859 (SEC13)
 Autophagy
  Other autophagy associated proteins
   SEACAT/GATOR2 complex
    104393859 (SEC13)
SSDB
Motif
Pfam: WD40 ANAPC4_WD40 NBCH_WD40 MIOS_WD40
Other DBs
NCBI-GeneID: 104393859
NCBI-ProteinID: XP_010001682
LinkDB
Position
Unknown
AA seq 308 aa
MSKWHDAQMDYYGTRLATCSSDRSLKIFDVRNGGQILIADLRGHEGPVWQVAWAHPMYGN
ILASCSYDRKVIIWKEENGTWEKTYEYTGHDSSVNSVCWAPHDSGLILACGSSDGAISLL
SYTGDGQWEVKKISNAHTIGCNAVSWAPAVVPGSLIEQPSGQKPNYIKRFASGGCDNLVK
IWKEEDGQWKEEQKLEAHSDWVRDVAWAPSIGLPTSTIASCSQDGRVFIWTCDDASGNSW
SPKLLHKFNDVVWHVSWSITANILAVSGGDNKVTLWKESVDGQWVCISDVNKGQGGVSAV
TEGQQNEQ
NT seq 927 nt   +upstreamnt  +downstreamnt
atgtcaaaatggcacgacgcccagatggattactacggcacccgcctggccacctgctcc
tccgaccgctccctcaagatcttcgacgtgcgcaacggggggcagatcctcatcgcagac
ctgagagggcacgaaggtcccgtgtggcaggttgcctgggctcatcctatgtatgggaat
atcttggcttcctgttcctacgacaggaaggtgattatctggaaggaagaaaatggcact
tgggaaaagacgtacgagtacacagggcacgattcctcagtgaattctgtctgctgggca
ccccatgactctggcctgatcctggcctgcggcagctcggacggggccatctcgctgctc
agctacacgggcgacgggcagtgggaggtgaaaaagatcagcaatgcacacacgattgga
tgtaatgcagttagctgggctcctgctgttgtaccaggaagccttatagagcaaccatct
ggtcaaaaaccaaactacatcaaaagatttgcatctggtggctgtgacaaccttgtcaag
atctggaaggaagaagatggtcagtggaaagaggaacagaagctggaggctcacagtgac
tgggttcgagatgtagcttgggctccatccataggtttgccaacgagcaccattgccagc
tgctcacaggatggcagagtgttcatctggacctgtgatgacgcctctggaaattcatgg
tcaccaaagctgctgcacaagttcaatgatgttgtctggcatgtgagctggtccattact
gcaaacattcttgctgtgtctggaggagacaacaaagtgacgctgtggaaggagtcggtg
gacgggcagtgggtctgcatcagcgacgtcaacaagggccagggaggggtttctgctgtg
acagaggggcagcagaatgagcagtga

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