Chaetura pelagica (chimney swift): 104393859
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Entry
104393859 CDS
T08631
Symbol
SEC13
Name
(RefSeq) protein SEC13 homolog
KO
K14004
protein transport protein SEC13
Organism
cpea
Chaetura pelagica (chimney swift)
Pathway
cpea03013
Nucleocytoplasmic transport
cpea04141
Protein processing in endoplasmic reticulum
cpea04150
mTOR signaling pathway
Brite
KEGG Orthology (KO) [BR:
cpea00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
104393859 (SEC13)
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
104393859 (SEC13)
09130 Environmental Information Processing
09132 Signal transduction
04150 mTOR signaling pathway
104393859 (SEC13)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cpea03019
]
104393859 (SEC13)
04131 Membrane trafficking [BR:
cpea04131
]
104393859 (SEC13)
Messenger RNA biogenesis [BR:
cpea03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
104393859 (SEC13)
Membrane trafficking [BR:
cpea04131
]
Protein recycling
Rab GTPases and associated proteins
Rab11 associated proteins
104393859 (SEC13)
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
104393859 (SEC13)
Autophagy
Other autophagy associated proteins
SEACAT/GATOR2 complex
104393859 (SEC13)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
ANAPC4_WD40
NBCH_WD40
MIOS_WD40
Motif
Other DBs
NCBI-GeneID:
104393859
NCBI-ProteinID:
XP_010001682
LinkDB
All DBs
Position
Unknown
AA seq
308 aa
AA seq
DB search
MSKWHDAQMDYYGTRLATCSSDRSLKIFDVRNGGQILIADLRGHEGPVWQVAWAHPMYGN
ILASCSYDRKVIIWKEENGTWEKTYEYTGHDSSVNSVCWAPHDSGLILACGSSDGAISLL
SYTGDGQWEVKKISNAHTIGCNAVSWAPAVVPGSLIEQPSGQKPNYIKRFASGGCDNLVK
IWKEEDGQWKEEQKLEAHSDWVRDVAWAPSIGLPTSTIASCSQDGRVFIWTCDDASGNSW
SPKLLHKFNDVVWHVSWSITANILAVSGGDNKVTLWKESVDGQWVCISDVNKGQGGVSAV
TEGQQNEQ
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaaatggcacgacgcccagatggattactacggcacccgcctggccacctgctcc
tccgaccgctccctcaagatcttcgacgtgcgcaacggggggcagatcctcatcgcagac
ctgagagggcacgaaggtcccgtgtggcaggttgcctgggctcatcctatgtatgggaat
atcttggcttcctgttcctacgacaggaaggtgattatctggaaggaagaaaatggcact
tgggaaaagacgtacgagtacacagggcacgattcctcagtgaattctgtctgctgggca
ccccatgactctggcctgatcctggcctgcggcagctcggacggggccatctcgctgctc
agctacacgggcgacgggcagtgggaggtgaaaaagatcagcaatgcacacacgattgga
tgtaatgcagttagctgggctcctgctgttgtaccaggaagccttatagagcaaccatct
ggtcaaaaaccaaactacatcaaaagatttgcatctggtggctgtgacaaccttgtcaag
atctggaaggaagaagatggtcagtggaaagaggaacagaagctggaggctcacagtgac
tgggttcgagatgtagcttgggctccatccataggtttgccaacgagcaccattgccagc
tgctcacaggatggcagagtgttcatctggacctgtgatgacgcctctggaaattcatgg
tcaccaaagctgctgcacaagttcaatgatgttgtctggcatgtgagctggtccattact
gcaaacattcttgctgtgtctggaggagacaacaaagtgacgctgtggaaggagtcggtg
gacgggcagtgggtctgcatcagcgacgtcaacaagggccagggaggggtttctgctgtg
acagaggggcagcagaatgagcagtga
DBGET
integrated database retrieval system