Chaetura pelagica (chimney swift): 104393977
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Entry
104393977 CDS
T08631
Symbol
PCDH9
Name
(RefSeq) protocadherin-9
KO
K16498
protocadherin delta 1
Organism
cpea
Chaetura pelagica (chimney swift)
Pathway
cpea03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
cpea00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
104393977 (PCDH9)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
cpea01009
]
104393977 (PCDH9)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
cpea04515
]
104393977 (PCDH9)
Protein phosphatases and associated proteins [BR:
cpea01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
104393977 (PCDH9)
Cell adhesion molecules [BR:
cpea04515
]
Cadherins
Protocadherins
104393977 (PCDH9)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Protocadherin
Cadherin_CELSR2_9th
Cadherin_2
RET_CLD1
MAP17
Big_9
V_ATPase_I
EphA2_TM
RCR
DUF6249
7tm_3
DUF6377
Motif
Other DBs
NCBI-GeneID:
104393977
NCBI-ProteinID:
XP_010001811
LinkDB
All DBs
Position
Unknown
AA seq
1014 aa
AA seq
DB search
MDLRDFYLLAALIACLRLDSAIAQELIYTIREELPENVPIGNIPKDLNISHINAATGTSA
SLVYRLVSKAGDAPLVKVSSNTGEIFTTSNRIDREKLCAGASYAEENECFFELEVVILPN
DFFRLIKIKIIVKDTNDNAPMFPSPVINISIPENTLINSRFPIPSATDPDTGFNGVQHYE
LLNGQSVFGLDIVETPEGEKWPQLIVQQNLDREQKDTYVMKIKVEDGGTPQKSSTAILQV
TVSDVNDNRPVFKESQVEVHIPENAPVGTSVIQLHATDADIGSNAEIRYIFGAQVAPATK
RFFALNNTTGLITVQRSLDREETAIHKVTVLASDGSSTPARATVTINVTDVNDNPPNIDL
RYIISPINGTVYLSEKDPINTKIALITVSDKDTDVNGKVICFIEREVPFHLKAVYDNQYL
LETSSLLDYEGTKEFSFKIVASDSGKPSLNQTALVRVKLEDENDNPPIFSQPVIELSVSE
NNRRGLYLTTISATDEDSGKNADIVYQLGPNASFFDLDRKTGVLTASRVFDREEQERFIF
TVTARDNGTPPLQSQAAVIVTVLDENDNSPKFTHNHFQFFVSENLPKYSTVGVITVTDAD
AGENKAVTLSILNDNENFVLDPYSGVIKSNVSFDREQQSSYTFDVKAVDGGQPPRSSTAK
VTINVMDVNDNSPVVIYPPSNTSFKLVPLSAIPGSVVAEVFAVDIDTGMNAEVKYPIVSG
NNKGLFRIDPVTGNITLEEKPTPNDVGLHRLVVNISDLGYPKSLHTLVLVFLYVNDTAGN
ASYIYDLIRRTMETPLDRNIGDSSQPYQNEDYLTIMIAIVAGAMVVIVVIFVTVLVRCRH
ASRFKAAQRSKQGAEWMSPNQENKQNKKKKRKKRKSPKSSLLNFVTIEESKPDDAVHEPI
NGTISLPAELEEQSIGRFDWGTAPPTTFKPNSPDLAKHYKSASPQSAFHLKPDTPVSVKK
HHVIQELPSSDHFSASECSSQGGFKTKGPLHTRQVNEHFYWSISTAYKCPINQY
NT seq
3045 nt
NT seq
+upstream
nt +downstream
nt
atggacctgagggatttttacctgctggccgctttgattgcctgtttaaggttggattct
gctatagctcaagaacttatttacactattagagaggagctgcctgaaaacgtacccata
gggaacataccaaaggacctgaacatttctcacatcaatgctgccacagggaccagtgcc
agccttgtctacagactggtgtctaaagcaggggatgcccctctggtcaaagtgtccagt
aacactggtgaaatctttacgacatctaacagaatagacagagaaaaactctgtgctgga
gcttcctatgcagaagaaaatgagtgtttctttgagcttgaagtggtgattctccccaat
gacttttttaggctgatcaaaataaaaataattgtaaaggatactaatgacaatgcacct
atgtttccatcccctgtcatcaatatctccatcccagaaaacactctgatcaacagtcgc
tttccaatcccatcagccacagatcctgacacaggtttcaacggtgtgcagcactacgag
ttgttaaacgggcagagtgtctttggactggatattgtagaaactccagaaggagagaaa
tggcctcagctgattgtgcagcagaacttggacagagagcaaaaggacacctacgtgatg
aaaatcaaagtggaggatggaggtactccccagaaatccagcacagccatcctgcaagtc
acagtaagtgatgtcaatgataacaggccagtgtttaaagagagtcaagtagaggttcat
ataccagagaatgcccctgtaggcacttctgtaattcagcttcatgctacagatgcagat
ataggaagcaatgcagaaatcagatatatttttggtgcccaagtcgcccctgcaaccaaa
agattttttgctttaaacaacaccacagggctgattacagttcagaggtccttagatcga
gaagagactgctattcacaaagtaacagtgctggctagtgatggtagctctacaccggcc
cgggcaaccgttaccatcaacgtcactgatgtaaatgataatcctcctaacatagacctc
aggtacataataagtcccatcaatggcacagtgtacttatctgagaaagatcccatcaat
acaaagattgccctaattacggtttcagataaggacactgatgtgaatggcaaagtgatc
tgtttcattgagagagaggtccccttccacttgaaggcggtttatgacaaccagtatttg
ttagagacctcttccttgttggactatgagggcaccaaagaattcagctttaaaattgtt
gcttctgattctggcaagcccagtttgaaccagactgccctggtaagagttaaactggag
gatgaaaatgacaaccctccgatttttagccagcctgtaattgagctgtcagtttctgaa
aacaaccgtcgtggtctatacttaacaactattagtgccacagatgaagacagtgggaaa
aatgcagacattgtttatcagcttggccctaatgcttccttttttgatctggatcgaaag
acgggagttttgacagcctccagagtttttgacagagaagagcaggaacgtttcattttc
actgttacagcccgagacaatggcacccctcctttgcagagtcaagcagctgtaattgtt
actgtgttggacgaaaatgacaacagtcccaaatttactcacaatcacttccagtttttc
gtatcagagaacttaccaaagtatagcacggtgggtgtgatcacggtgaccgatgcagat
gctggggaaaacaaagcggtgaccctttccatcctgaatgacaatgaaaactttgtgctg
gatccgtactctggagttataaagtccaatgtttcttttgatagagaacagcagagctcc
tacacctttgatgttaaggcagtggatggagggcaacctcctcgctcttccacagcgaaa
gtaaccataaatgtcatggatgttaacgataacagccctgttgtcatctacccaccttct
aatacttcttttaagttagtgccactctcagcaattccaggatcggtagtagctgaagtc
tttgctgtggatatagacacgggaatgaatgccgaagttaagtacccaattgtaagtgga
aacaacaagggtttgtttcggattgatccagtgacgggtaatatcactctggaagaaaaa
ccaactcctaatgacgtggggctgcatcgcttagttgtcaacataagtgatttgggttat
cccaaatccctgcatactcttgtgcttgtctttctatatgtaaatgatactgctggaaat
gcctcttatatttatgacttgatacgcaggactatggaaacacctttggatcggaacata
ggggacagtagccaaccctaccaaaatgaagactatctcacaattatgatcgccattgta
gcaggtgccatggttgtcatagtggtgatatttgtcacagttctcgttcgctgtcgacat
gcatccagattcaaagctgcccagaggagcaagcaaggtgctgagtggatgtctcccaat
caggagaacaagcaaaacaagaaaaagaaaaggaagaaaaggaaatctccgaagagctct
cttttgaactttgtgaccattgaggagtccaaacctgacgatgcagttcatgaacctatc
aatgggacaataagccttccagcagagctggaggagcaaagtataggaagatttgactgg
ggcacagcaccaccaacaacatttaagcctaacagtcctgatcttgctaagcattacaaa
tctgcctctccacagtctgcttttcatctcaaacctgacactccagtttcagtgaaaaag
caccatgtgattcaggaactccccagttcagatcacttcagtgcctcagagtgcagttcc
caaggaggcttcaagacaaagggccccttacacaccagacaggtaaacgagcacttttac
tggtctataagtactgcatacaagtgcccgatcaaccagtattaa
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