Chaetura pelagica (chimney swift): 104394022
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Entry
104394022 CDS
T08631
Symbol
TOP3A
Name
(RefSeq) DNA topoisomerase 3-alpha
KO
K03165
DNA topoisomerase III [EC:
5.6.2.1
]
Organism
cpea
Chaetura pelagica (chimney swift)
Pathway
cpea03440
Homologous recombination
cpea03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
cpea00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
104394022 (TOP3A)
03460 Fanconi anemia pathway
104394022 (TOP3A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cpea03032
]
104394022 (TOP3A)
03400 DNA repair and recombination proteins [BR:
cpea03400
]
104394022 (TOP3A)
Enzymes [BR:
cpea01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
104394022 (TOP3A)
DNA replication proteins [BR:
cpea03032
]
Eukaryotic type
DNA Topoisomerases
104394022 (TOP3A)
DNA repair and recombination proteins [BR:
cpea03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Bloom's syndrome complex (BTR)
104394022 (TOP3A)
FA (Fanconi anemia) pathway
104394022 (TOP3A)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_GRF
Toprim
Zn_ribbon_Top1
zf-C2H2_10
Zn_ribbon_GRF_2
zf-CCHC
Motif
Other DBs
NCBI-GeneID:
104394022
NCBI-ProteinID:
XP_010001864
LinkDB
All DBs
Position
Unknown
AA seq
1017 aa
AA seq
DB search
MNLQAGLFAARGVRMLPQPWRLFSRAAEDGALQRIRRVLCVAEKNDAARGIADLLSNSRM
RRREGFSKFNKIYEYDYQMFGQNVTMVMTSVSGHLLAHDFKMPFRKWHSCNPLALFDAEI
EKYCPENYMDIKRTLEREVQQCQALVIWTDCDREGENIGFEIIHVCKAVKPNLQVFRARF
SEITLHAVRTACENLTQPDQKTSDAVDVRQELDLRIGAAFTRFQTLRLRKIFPDILADQL
ISYGSCQFPTLGFVVERFKAIQAFVPEGFYKIKVTHDHEEGTVVFNWKRNRLFNHTACLV
LYQMCMEDPVATVVEVGSKPKSKWRPLPLDTVELEKLASRKLKINAKETMRIAEKLYTQG
FISYPRTETNIFPKELNLSALVQQQTQDPSWGAFAQRILDEGGPTPRSGNKSDQAHPPIH
PTKHTTSLQGNEQRLYEFIVRHFLACCSQDAKGQETTVEIDIANERFIAQGLMILARNYL
EVYPYEKWSDKVIPLYQKGSRFQPTTVEMVDGETSPPLLLTEADLIALMEKHGIGTDATH
AEHIETIKTRMYVGLTQDQRFLPGHLGMGLVEGYDSMGYEMSKPDLRAELEADLKLICEG
KKDKSVVLQQQVQKYKQVFIEAVARANKLDQALAQYFGEGTEITEQEEVYPAMPVAVRKC
PQCNSDMVLKTKRNGGFYLSCTGYPACKTAVWFPDFVLDVTRDESICAVCEPHPVHRLKF
KFKRGSVPPVMPLEFVGCIGGCDEMLKELLDLKYLHRPAQPAPASQQGHHPQVSSSSSTA
SGENRQVRGTTNPAPGRLLSLNSARTARAAPSAAPDAGNAVVCNCGIEALLLTVRKEGPN
QGRQFYKCSSSTCNFFLWADQHSEDRSNAAPRGSALPQPFAGRGPAGFQRPGGGRGPEPF
GSNSSDSGGGTVCKCDQPAVTRTVQKDGPNKGRQFHTCSKPREQQCGFFQWADEAVEPGP
SGDVSVNPPGSSGYSRGLGSKAKRPSILSSGVTAKKPRTCSICHQPGHTRKNCPQNH
NT seq
3054 nt
NT seq
+upstream
nt +downstream
nt
atgaacctccaggccgggctctttgctgcccgcggggtcaggatgctgccccagccctgg
cgcctcttctcccgggctgccgaggacggggctctgcagaggatccgcagggtcctgtgc
gtggccgagaagaacgacgctgcccgcgggattgcagacctgctctccaacagcagaatg
cggcggcgagaagggttttccaagttcaacaagatctatgaatatgactaccagatgttt
ggccagaacgttaccatggtgatgacatctgtgtctggacacttgctggctcatgatttt
aagatgccctttcggaaatggcacagctgcaaccccctggctctttttgatgctgaaatt
gagaagtattgccctgaaaattacatggatatcaagaggaccctggaacgggaagtccag
cagtgccaggctctggtgatctggacggactgcgaccgagaaggagagaacatcggcttt
gagatcatccacgtctgcaaagctgtaaagccaaacctccaggttttccgagcccggttc
tcagagattacgctccacgccgtcagaacagcctgtgagaacctcacccagccagatcag
aaaaccagtgatgctgttgacgtcaggcaggagctggacctcaggataggtgctgccttc
accagattccagacactgaggctccggaagatcttcccggatattttagcggatcagctg
atcagctacggcagctgccagttcccaacgctgggctttgtggttgaacgcttcaaagcc
atccaggcctttgttcctgaaggcttctataaaatcaaagtgacacatgatcatgaagag
ggcactgtggtcttcaactggaagaggaaccggctcttcaaccacacagcctgcctggtc
ctttaccagatgtgtatggaggatccagtagcaactgttgttgaggttgggagcaagcca
aagagcaaatggaggcccctgcccctggacactgtggaactggagaagttggcttcccgc
aagctgaaaataaatgcaaaggaaaccatgagaatagcagaaaaactctatactcaaggg
ttcattagctacccccgaacagagaccaacattttccccaaggagctgaacctctctgcc
ttagtgcaacagcaaacacaggacccgagctggggagcatttgcacagaggattttggat
gagggtgggccaacccctcggagtggaaacaaatcagatcaggctcatcctcccattcac
cccacaaaacacaccactagcctgcagggcaacgagcagagactgtacgaattcatcgtg
cgccatttcctggcttgctgctcccaagatgccaagggccaggaaacaactgtggagatt
gacatcgctaatgagcgcttcattgctcaaggattaatgatcctggcccgaaattaccta
gaagtttatccttatgagaagtggagtgataaggttatcccactgtatcagaaagggtct
cgctttcagcccactacagtggagatggtggatggggaaaccagccctccattgctcctc
acagaagcggatctcattgctctcatggagaaacatggcattgggaccgacgccactcac
gccgagcacatcgagaccatcaagacgcggatgtacgtgggtctgacccaggatcagcgc
ttcctcccaggccacctgggcatggggctggttgaaggctacgattccatgggctacgag
atgtccaagcctgaccttcgagctgagctggaggctgatctgaaactcatctgtgaaggg
aagaaggacaaatctgttgtgttgcagcagcaggtccagaagtacaagcaagtcttcatt
gaagctgtggccagagctaacaagttggaccaagccctagctcagtattttggagaaggc
acagaaatcacagagcaagaggaggtctacccagcaatgcccgtggctgttcggaagtgt
ccgcagtgcaacagcgacatggtcctgaagaccaagaggaacggcgggttctatctcagc
tgcacaggctatccagcttgtaaaactgcagtctggtttcctgattttgtgctggatgtg
accagggatgagagcatctgtgctgtgtgtgaaccccatcctgttcacagactgaagttt
aagttcaagaggggcagcgtgccacccgtgatgcccctggagtttgttggctgcatcggg
ggctgtgatgagatgctcaaagagctcctggacctcaagtacttgcaccgcccggcccag
ccagcaccagccagccagcaaggtcaccacccgcaggtcagcagctcctccagcacagct
agtggtgaaaacaggcaggtgagagggaccacaaacccggcgccgggacgtctgctctct
ttgaactcggcaagaacagctcgggctgctccctcggccgctccggatgcagggaacgcc
gtggtgtgcaactgtgggattgaagccctgctgctgactgtgcgaaaggaagggcccaac
caaggcaggcagttctacaagtgcagctccagcacctgcaacttcttcctctgggctgat
cagcactcggaggacagaagcaacgcggctccgcggggctctgcgctgccccagcccttc
gcaggaaggggcccagcaggattccagcgtcccggaggagggaggggcccagagcccttt
ggaagcaacagctcagattcaggaggtggcactgtctgcaagtgtgaccaaccagctgtc
acccgcaccgtccagaaggacgggcccaacaaagggaggcagttccacacctgctccaag
ccgcgggagcagcaatgtggcttcttccagtgggcagatgaagctgtggaaccagggcct
tctggagatgtctctgtgaacccccctggcagcagtggatactcaagagggttgggaagt
aaagccaagagaccaagcattctgtcctcaggagtcactgccaagaaaccacggacctgt
agcatttgccaccagcctggccatacaaggaaaaactgtcctcagaaccactga
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