Chaetura pelagica (chimney swift): 104394041
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Entry
104394041 CDS
T08631
Symbol
CACNA1H
Name
(RefSeq) LOW QUALITY PROTEIN: voltage-dependent T-type calcium channel subunit alpha-1H
KO
K04855
voltage-dependent calcium channel T type alpha-1H
Organism
cpea
Chaetura pelagica (chimney swift)
Pathway
cpea04010
MAPK signaling pathway
cpea04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
cpea00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
104394041 (CACNA1H)
04020 Calcium signaling pathway
104394041 (CACNA1H)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cpea04040
]
104394041 (CACNA1H)
Ion channels [BR:
cpea04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
104394041 (CACNA1H)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
PKD_channel
Motif
Other DBs
NCBI-GeneID:
104394041
NCBI-ProteinID:
XP_010001882
LinkDB
All DBs
Position
Unknown
AA seq
2322 aa
AA seq
DB search
MDLAEEEGSPDRDPQPELPSEEEEEEQVPYPALAPTAFFCLKQTTRPRSWCLRLVCNPWF
EHVSMLVILLNCVTLGMFQPCEDVECQSERCTILEAFDDFIFAFFAVEMVIKMVALGIFG
QKCYLGDTWNRLDFFIVMAGMMEYSLDGHNVSLSAIRTVRVLRPLRAINRVPSMRILVTL
LLDTLPMLGNVLLLCFFVFFIFGIVGVQLWAGLLRNRCFLDRNFARTYNLTFLHPYYRTD
EAEENPFICSSHRENGMQKCSNIPTRKEYKLECTLSMDSYTPSLYNPXXXXXXXXVCMAG
DVNPHNGAINFDNIGYAWIAIFQVITLEGWVDIMYYVMDAHSFYNFIYFILLIIVGSFFM
INLCLVVIATQFSETKQRENQLMQEQRARYLSNDSTIASFSEPGSCYEELLKYICHIFRK
VKRRTIRLYNNWQSKRRKKVNPNSTTNGQSHRGKKHITSIHHLIHHHHHHHHHYHISNGS
PRGPCSNPEICDLELKVMKPGNQLMLPPPSPNLQGPAPPPDSESVHSIYHADCHIEGPQV
NCKSSNAPASIKLTAGLSNRGNMNYPTILPSPTSKATSAPVPKGKKNGNSPVPVVNSPVS
LGTDSYGKLQQLVGEQGLRRAPSRLSGLSAGCPLPSPPGGTLTCELQDCPFCASLLEDPE
FAFSESDSCDSDNNGVYEFTQDLQHGDHRDQLQQQRSRRKRKKKKPKERNKVTRLWKAFG
SKLKRIVESKYFNRGIMIAILINTLSMGIEYHEQPDELTNALEISNIVFTSMFALEMLLK
LLAFGLFGYIKNPYNIFDGIIVVISVWEIIGQSDGGLSVLRTFRLLRVLKLVRFMPALRR
QLVVLMKTMDNVATFCMLLMLFIFIFSILGMHLFGCKFSLKTDTGDTVPDRKNFDSLLWA
IVTVFQILTQEDWNVVLYNGMASTSSWAALYFVALMTFGNYVLFNLLVAILVEGFQAEGD
ANRSDTDEDKTSANFDDDFEKLKDLRATELKMYSLAVTPNGHLEGRGSLPPPIIMRTAAT
PMPTPKCSPHMDSVHTFVDSRRGSNASLDPLSYDQKSLSSLRSSPCANWGTSSNWGSCCS
SWNSLGRAPSLKKKSQSGERESLLSGEGKGSTDDDSDDAKSGTSRASLHRRAESLDYRSA
LELPELLPLPALRPSLSLSPVAILPAEYQDCNGKMVHVPSEFFLRVDGHKEDAADYEDEV
EDSYCYRIRKFLEPYKPQWCKSHENWSLYLFSPQNRFRVMCQKVIAHKMFDHVVLVFIFL
NCITIALERPDIDPHSTERIFLSVSNYIFTAIFVAEMMVKVVALGFFSGENTYLQSSWNV
LDGVLVFVSIIDIIVSMASAGGAKILGVLRVLRLLRTLRPLRVISRAPGLKLVVETLISS
LRPIGNIVLICCAFFIIFGILGVQLFKGKFYYCDGPDVKNITTKSDCTSAHYKWVRRKYN
FDNLGQALMSLFVLSSKDGWVNIMYDGLDAVGIDQQPIQNHNPWMLLYFISFLLIVSFFV
LNMFVGVVVENFHKCRQHQEAEEARRREEKRLRRLEKKRRKAQRRPYYADYSPARKYIHT
LCTSHYLDLFITFIIGVNVITMSMEHYNQPKSLDEALKYCNYVFTIVFVFEAVLKLVAFG
FRRFFKDRWNQLDLAIVLLSIVGITLEEIEMNAALPINPTIIRIMRVLRIARVLKLLKMA
TGMRALLDTVVQALPQVGNLGLLFMLLFFIYAALGVELFGKLDCSDENPCEGLSRHATFT
NFGMAFLTLFRVSTGDNWNGIMKDTLRECTREDKHCLSYLPVISPVYFVTFVLIAQFVLV
NVVVAVLMKHLEESNKEAKEDAEMDAEIELEMSRGMTPPPSLLALQGGAASLRPQDPQNL
LTVRKISVSRMHSLPNDSYMFRPVMPAKAPFPLHEVEMEAYPCKSQRGSITSIRSQPVGT
CSSPRVPMESLPLAARSPNHEGRPRWKILPPHVTPRSPTLNKLLCRQEAIRTDSVDGQTS
ERKDSLQAEPGGIPPSSPHPGTPARKHSHSRPPSPGSSPPNPLGSLFESSDLADEEVRHI
NSSARDWGEEHSEAGSRSTSPFISPAPSPVPLKNCSTTSLSGGSSKEKDLKKLYSTDTKG
FLNKPSWADDHRRHSIEICPSISDRDCTFEDPAGEKQRSPAHVQPESEYIHGARRKKKMS
PPCISIDPPMEDDGGAASRTKPSENSMLRRRTPSCEFPAYRESLELSENQPGEPASKAER
RGQPPCRGDHLTIPNFSFEQLDNSSLSSLSDLLLDGGQAAPAPVDSRLDPAASELKKPDH
LKTQWSNTEKSKELLGVAKSPLRKQDLVPVTVATEEDIDDPV
NT seq
6969 nt
NT seq
+upstream
nt +downstream
nt
atggacctggctgaggaggaaggctcccccgaccgagaccctcagcccgagctgccctcc
gaggaggaggaggaggagcaggtgccttacccggcgctggcacccaccgccttcttctgc
ctcaagcaaaccacccgcccgcgcagctggtgcctcaggctggtctgtaacccctggttt
gagcacgtcagcatgctggtcatcctcctgaactgtgtcaccctgggcatgttccagccc
tgcgaggacgtggagtgccagtcggagcgctgcaccatcctggaggcgtttgacgacttc
attttcgctttctttgcggtggagatggtcatcaagatggtggctctggggatcttcggg
cagaagtgttaccttggagacacgtggaatcgcctggacttcttcattgtgatggcaggc
atgatggagtattccctggatggccacaacgtgagcctctcagccatccgcacggtccgg
gtgcttcggccacttcgagccattaacagggtcccaagtatgcgaatactcgtcaccctg
ctgttagatactctgcctatgttaggcaacgtcctcctcttgtgcttctttgtcttcttc
atctttgggattgttggtgtgcagctctgggcagggctgctgagaaacaggtgtttccta
gacaggaattttgcaaggacatacaacctcaccttcctgcatccgtactaccggacagac
gaggcggaggagaatccattcatctgctcatcgcaccgtgagaatggcatgcagaagtgc
tccaacatcccaaccaggaaggagtacaagctggagtgcaccttgagcatggactcctac
accccaagtttatacaaccctngannnnnnnnnnnnnnnnnnnnngtttgcatggctggg
gacgtaaacccacacaacggggctatcaattttgataacattggatatgcctggatagct
atttttcaggttataaccctggaaggatgggttgacatcatgtattatgtgatggatgca
cattctttttacaattttatatattttatattgcttataatagttggttccttcttcatg
attaacttgtgcctggttgtgatagcaacacagttttctgaaacaaagcagcgggagaac
cagctgatgcaggagcagcgggcccgttacctctccaacgacagcacaattgcaagcttc
tcagagccaggaagctgctacgaggagctgctcaagtacatctgccacatcttcaggaag
gtgaagcgtcggacaatacgtctgtacaataactggcagagtaagcgccggaaaaaagtg
aacccaaacagcaccacaaacgggcaaagccaccgaggcaaaaagcacatcacctccatc
caccacctcatccaccatcaccaccaccaccatcaccactaccacatcagcaacgggagc
cctcggggaccgtgctccaaccctgagatctgcgaccttgaactcaaggtcatgaaacct
ggaaaccaactgatgcttcctcccccatcccccaacttgcagggtcctgctccccctcca
gattcagagtctgtgcacagcatttaccacgcagactgtcacatcgaaggaccacaagtg
aactgtaagtcttccaacgcccctgcgagcattaaactgactgctgggctctccaaccgt
ggcaacatgaactatcctaccatcctgccttctccaactagcaaagccacttctgctcca
gttcccaaaggaaagaagaatggtaattcacctgtgcccgtggttaatagccccgtaagt
ttgggcacggattcttatgggaagctgcagcaactggtaggagagcagggcctgcggcgg
gcgcccagccggctgtcggggctgagcgcgggctgccccctgcccagcccgccgggcggg
acgctgacctgcgagctgcaggactgtcccttctgtgccagcctcctggaggaccccgag
ttcgccttcagcgagtctgacagctgcgactccgacaacaacggggtctatgaattcacc
caggacctgcagcacggagaccacagagaccagctccagcagcagcggagcaggaggaag
aggaagaagaaaaaacccaaggagaggaacaaggtcacccgcctgtggaaggcttttggc
agcaagctgaagaggatcgtggagagcaagtacttcaaccgggggattatgatagccatt
ctcatcaacacgctgagcatgggcatcgagtaccacgagcagccagatgagttgaccaac
gccttggagatcagtaacatcgtctttacaagcatgtttgccctggagatgctcctgaaa
ctccttgcctttggtctcttcggctacatcaagaacccgtacaacatctttgatgggatc
atcgttgtcatcagtgtctgggagatcatcggccagtcggacgggggcctctctgtgctc
cggaccttccggctgctccgggtgctgaagctggtgcggttcatgcccgccctgcggcgc
cagctggtggtcctgatgaagacaatggacaacgtagccaccttctgcatgttgctcatg
ctcttcatctttatcttcagcattcttggaatgcacctttttggatgcaagttcagcctg
aaaactgatacaggagacacagttccagacagaaagaattttgattccttgctttgggcc
attgtgactgtatttcagatcctcactcaagaggactggaacgtggtcctgtacaatggg
atggcatctacatcctcatgggcagctctctactttgtggccctgatgacctttggcaat
tacgtgctcttcaaccttctggttgccatcctggtagaaggcttccaggcagagggtgat
gccaacaggtcagacacagatgaggacaagacatctgccaacttcgatgatgattttgaa
aagctgaaggatcttcgagcaacagagttgaagatgtactcactggctgtcaccccaaat
ggacacctggagggcaggggcagcctgcctcctcctatcatcatgcgcactgctgccaca
ccaatgcccacacctaagtgttccccacacatggattcagtgcacacatttgtggactca
aggagagggagtaacgcttcactggaccccctgagctatgatcagaagtccttgtccagc
ctccgcagttccccttgcgccaactggggcaccagcagcaactggggaagctgctgctca
agctggaacagcctgggcagggccccaagcctcaagaagaagagccagtcaggagagagg
gagtccttgctctccggggagggcaaaggcagcacagatgatgactcggatgacgccaag
tccggcaccagcagggcctccttgcaccgccgggccgagtccttggattaccgcagcgcc
ctggagctgcccgagctgctcccgctgcccgccctgcgcccctcgctcagcctcagcccc
gtggccatcctgcctgccgagtaccaggactgcaacggcaagatggttcacgtccccagc
gagttcttcctgcgcgtcgacggccacaaggaggacgcagcggactatgaggacgaggtg
gaggacagttactgctaccgaattcgtaaattcctggagccctacaagccacagtggtgc
aagagtcatgaaaactggtccctctacttgttctcaccacagaatcggttccgagtgatg
tgccagaaggtcattgcccacaagatgtttgatcacgtggttctggttttcatatttctc
aactgcatcactatagcactggagcgaccagacatagacccacacagcacagaaaggata
ttcctaagtgtttctaattacatcttcactgcgatttttgtggctgaaatgatggttaag
gtggtggctcttggctttttctctggggagaacacctatctgcagagcagctggaatgtt
ctggatggagtcctggtctttgtatctatcattgacatcattgtctccatggcatcagca
ggtggagctaagatcttgggtgtccttcgtgttttgagactcctgaggaccttgagacct
ctccgagtaatcagcagggccccaggtctgaagctggtggtagaaaccttgatctcctcc
ttgaggcctattgggaatattgttctcatctgctgtgctttcttcattatcttcgggatt
ttaggggtccagctttttaaaggcaagttctactactgtgatggtcctgatgtgaaaaac
atcaccacaaagtctgactgcaccagtgcacactacaaatgggttcggcggaagtacaat
tttgacaacctgggacaggctctcatgtccctctttgtcctctcctccaaggatggctgg
gtgaacatcatgtacgatggcttggatgctgtgggtattgaccaacagcccatccagaac
cataacccttggatgcttctctacttcatctccttcctgctcattgtcagcttcttcgtg
ctcaacatgtttgtgggggtggtggtggagaacttccacaagtgccggcagcaccaggag
gcagaggaggcccggcggcgggaggagaagcggctgagacgcttggagaaaaagcgcagg
aaagcccagcgcagaccttactacgctgactattccccagcacggaagtacatccacacc
ctctgcaccagccactatcttgacctcttcatcaccttcatcattggggtcaatgtcatc
actatgtcaatggagcactacaaccagccaaagtccctggatgaagccctgaagtactgc
aactacgtgttcaccatcgtttttgtgttcgaggcagttctgaagttggtggcatttggg
tttcgaaggttctttaaggacaggtggaatcagctggatttggccatcgttctcttgtca
attgtgggaatcacactggaggaaattgagatgaatgctgcattgcccatcaaccccacc
atcatccgcatcatgcgggtgctgagaatagcaagagtgctgaagctgcttaaaatggcc
actgggatgagagctctcctggacacagtggtacaagcacttccccaggtagggaacctt
ggcctactttttatgctcctgttttttatctatgctgcccttggagtggaattgtttggc
aagctagactgcagtgatgaaaatccttgtgaaggcctgagcaggcatgcaactttcacc
aactttggcatggccttcctcaccctcttcagggtgtcaacaggggacaactggaatggt
atcatgaaggacactctccgggaatgcactcgggaagacaagcactgcctcagttacctg
cctgtcatctctcctgtctactttgtcaccttcgtcctcatcgcgcagtttgtcctcgtc
aacgtggtggtggcagtgctgatgaagcacttggaggagagcaacaaggaggccaaggag
gatgctgaaatggatgctgagatcgagttggagatgtccagaggaatgaccccacctccc
tctctccttgctttgcagggcggcgcagcctctctgaggccccaggaccctcagaacctg
ctgaccgtccgcaagatctccgtgtcgcggatgcactccctgcccaacgacagctacatg
ttccggccagtgatgccagccaaagcccccttccccctccacgaggtggagatggaagcc
tatccctgcaaatcccaaagagggtccatcacctccatccgctcccagcccgtgggaacg
tgttcctctccaagggtccccatggagtccctgccactggcagcccgttctcccaaccac
gaaggccgcccccgctggaagatccttcctccccacgtcacacctcgatctcctactctc
aacaagctgctctgcagacaggaggccattcgaacggactctgtggacgggcagacttcg
gagcgcaaggacagcctgcaggcagagcctggagggatccctccatcctccccgcacccc
gggacgcctgcacggaagcacagccacagccggccacccagccccggcagcagccccccc
aaccccctgggcagcctcttcgagtcctccgacctggctgacgaggaggttcggcacatc
aacagctcggccagagactggggggaggagcactcagaggccgggagccgctccacttcc
cccttcatctcccctgccccgtctccggtgcccctcaagaactgcagcacaaccagcctc
tctggaggcagcagcaaggagaaggacttgaagaagctctacagcaccgataccaagggc
ttcctgaacaagcccagctgggcagacgaccacaggcggcactccatcgagatctgcccc
tccatcagcgacagggactgcacctttgaggaccctgctggggaaaagcagcgctctcct
gcccacgtccagcctgagtctgagtacatccacggggcccggaggaagaagaagatgagc
ccaccctgcatttctatagatcctcccatggaggacgacggcggggcggcctcgcgcacc
aagccctcggagaacagcatgctgaggagaaggaccccgtcctgcgagttcccggcctac
cgagagtccctggagctctcagagaaccagcccggggaaccggcctccaaagcggagcgc
cggggccagcccccctgccgcggggaccacctcaccatccccaacttctcctttgagcag
ttggacaacagctccttgagcagcctctcggatctcctcctggacggcgggcaggccgcg
ccggcccccgtggattcccggctggatcccgctgcctccgaactgaaaaagccggatcac
ttaaaaactcagtggagcaacactgagaaaagcaaagagctgctgggcgtcgccaagagc
cccctccggaagcaggacttggtcccggtgactgttgcaacagaagaagacatagatgac
ccagtatag
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integrated database retrieval system
