Chaetura pelagica (chimney swift): 104394123
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Entry
104394123 CDS
T08631
Symbol
ARID1A
Name
(RefSeq) AT-rich interactive domain-containing protein 1A
KO
K11653
AT-rich interactive domain-containing protein 1
Organism
cpea
Chaetura pelagica (chimney swift)
Pathway
cpea03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
cpea00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
104394123 (ARID1A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cpea03000
]
104394123 (ARID1A)
03021 Transcription machinery [BR:
cpea03021
]
104394123 (ARID1A)
03036 Chromosome and associated proteins [BR:
cpea03036
]
104394123 (ARID1A)
Transcription factors [BR:
cpea03000
]
Eukaryotic type
Helix-turn-helix
ARID
104394123 (ARID1A)
Transcription machinery [BR:
cpea03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
104394123 (ARID1A)
Chromosome and associated proteins [BR:
cpea03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
104394123 (ARID1A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BAF250_C
ARID
Motif
Other DBs
NCBI-GeneID:
104394123
NCBI-ProteinID:
XP_010001978
LinkDB
All DBs
Position
Unknown
AA seq
1893 aa
AA seq
DB search
MDQMGKMRPQPYGGNNPYTQQQGPQAGPQQGHGYPGQPYGPQTPQRYPMGMQSRTQSTMG
SISYAQQIPPYGQQGPSAYGQQGQTPYYNQQSPHPQQQQPPYSQQPPSQTPHSQPSYQQQ
QQPQSQAPQLQPSQPAYSQQQSQPPHQQSPTPYPQQQSSAQQHQQSQPPYSQQQSQSPYQ
QQQQTQQTPSSALSQQSSSYPPSQPQQQQQSAYSQQRFPPPQELSQDSFGSQASSAPSMA
SSKGQEDMNLNLQSRPSSLPDLSGSIDDLPMGTEGALSPGVSTSGISSSQGEQSNPAQSP
FSPHTSPHLPGIRGPSPSPVGSPASVAQSRSGPLSPAAVPGNQMPPRPPSGQSDSLMHPS
MNQSSIAQDRGYMQRNPQMPQYSSPQPGSALSPRQSSGGQMHAGMGPYQQNSMGSYGPQG
GQYGPQGGYPRQPNYNAMSNANYPSPGMGGSMNPMGAGSQMHGQTGVPPYSGLPPGRMSH
ATMGNRPYGPNMANMPPQVGTGMCPPPAGMNRKAQEAAAAAMHAAANSIQTRPPGYPNMN
QGGMMGTGPPYGQGINSMAGMINPQGPPYSMGGNMANNSAGMAASPEMMGLGDVKLTPAN
KMNNKADGTPKAESKSKKSSSSTTTNEKITKLYELGGEPERKIWVDRYLAFTEEKAMGMT
NLPAVGRKPLDLYRLYISVKEIGGLTQVNKNKKWRELATNLNVGTSSSAASSLKKQYIQC
LYAFECKIERGEDPPPDIFAAADSKKSQTKIQPPSPAGSGSMQGPQTPQSTSSSMAEGGD
LKPPTPASTPHSQMPPLPGIRSNSVGLQDAFADGSDPTFQKRNSMTPNPGYQPSMNTSDM
MGRMSYEPNKDPYSSMRKAPGSDPFMSSGQGPNTGMGDPYNRATGPGMGNMAMGQRQHYS
YGGPYDRVRTEPGMGPEGNLATGTPQPNIMPSTPESGMYSPSRYPQQQQQQQRHDSYGNQ
FSTQGTSSGSPFPSQQTTMYQQQQQNYKRPMDGSYGPPAKRHEGEMYNVPYSTGQGQSQQ
QLPPAQSQQPSQQQAAQPCPQQDLYNQYGSTYPAAGRTPAGPQNQFPFQFGRDRVSAPPG
SNAQQNMPPQMMGGPIQSAPEGPQQGSMWQGRNDLGYSYPNRPSAGSAPQGPAYHGVTRT
DEILHSDQRVNHEGPWPSHGNRQPPYGPSAPVPPMTRPPQSNYQTPPSMQNHIPQVSSPA
PLPRPLENRTSPSKSPFLHSGMKMQKAGPPVPASHITPAAVQPPMIRRDITFPPGSVEAT
QPVLKQRRRLTAKDIGTPEAWRVMMSLKSGLLAESTWALDTINILLYDDNSIMTFNLSQL
PGLLELLVEYFRRCLIEIFGILKEYEVGDPGQRTLLDPERFCKSSASSPEEGEEDDEPRS
LNCEEEEEDEEEEEAAFSSKDKAPLESSEEKLTSKFDKLPVKVVQKNDPFVVDYSDKLGR
VQEFESGLLHWRIGGGDTTEHIQTHFESKTELPAPHKRASCSSALRKRSAAESNPSTREG
EAPPADSSSEKRITATMDDMLSARPGSLAGEEEEVKPLETAKESSKFPFGISPAQSHRNI
KILEDEPHSKDETPLCTLLDWQDSLAKRCICVSNIIRSLSFVPGNDFEMSKHPGLLLILG
KLILLHHKHPERKQAPLTYEKEEEQDQGVSCNKVEWWWDCLEMLRENTLVTLANISGQLD
LSPYPESICLPILDGLLHWAVCPSAEAQDPFPTLGPSAVLSPQRLVLETLSKLSIQDNNV
DLILATPPFSRLEKLYSTMVRFLSDRKNPVCREMAVVLLANLAQGDSLAARAIAVQKGSI
GNLLGFLEDSLAATQFQQSQAGLMHMQNPPFESTSVDMMRRAARALLALAKVDENHSEFT
LYESRLLDISVSPLMNSLVSQVICDVLFLIGQS
NT seq
5682 nt
NT seq
+upstream
nt +downstream
nt
atggatcagatggggaagatgaggcctcagccctatggagggaacaacccgtacacacaa
caacagggacctcaggctggaccacagcaaggacatggctatccaggacagccctatggg
ccacagactcctcagagatatcccatgggaatgcaaagcaggacgcaaagtacaatgggc
agcatctcatatgcacagcagattcctccttatggacagcagggccccagtgcatatggg
cagcaaggccagactccgtattacaaccagcaaagccctcatccccagcagcagcagcct
ccatattctcaacagcctccatcccagacccctcactctcagccttcttatcagcagcag
caacagcctcagtctcaagctccccagctccagccatcacaaccagcctactcccagcag
cagtcccagccaccccatcagcagtccccaactccctaccctcagcagcagtcctcagcc
cagcagcatcagcagagtcagcctccctactcccagcagcagtcacagtcaccctaccag
cagcagcagcaaacccagcagacaccttcctcagccctctctcagcagtcatcttcatac
cccccgtcgcagccgcagcagcagcagcaatcagcctactcccagcagcgcttccccccg
cctcaggagttatctcaagactcgtttgggtcccaggcatcatctgctccctcaatggct
tccagtaaagggcaagaagacatgaacttgaatcttcaatccagaccttcgagtctgccg
gacctgtctggttccatagatgatctgcccatgggtacagaaggagccctgagtcctgga
gtaagcacatcagggatttccagcagtcaaggagagcagagtaacccagctcagtctcct
ttctctccacatacctctcctcacctgccaggcatcagaggaccctccccatccccagtt
ggatctccagctagtgttgctcagtcccgctctggtcccctctcacctgctgcagtacca
ggcaatcagatgccaccccgaccgcccagcggccagtcggacagtctcatgcacccttcc
atgaaccagtccagcatcgcgcaagaccgaggttacatgcagaggaaccctcagatgccc
cagtacagctcaccccagcctggctcagccttatctccacgtcagtcttctggaggacag
atgcatgcaggaatggggccctaccagcagaactccatggggagctacggaccccagggg
gggcagtatggacctcaaggaggttatcccaggcagccaaactacaatgctatgtccaat
gccaactaccctagtccaggaatgggaggaagcatgaaccccatgggagcagggagccag
atgcatgggcagactggtgtgccaccatacagtgggcttcctccagggaggatgagccat
gcaaccatgggcaaccgaccttatggacctaacatggcaaatatgccacctcaggtgggg
acagggatgtgtccccctccagctggcatgaaccgcaaagcacaagaggcagctgctgct
gccatgcatgctgctgccaactccatccagaccaggcctcctggttatcccaacatgaat
caagggggaatgatgggcactggacctccttatggacagggaattaacagcatggctgga
atgataaacccccagggccctccctattctatgggggggaatatggctaacaactctgca
gggatggcagcaagtcctgaaatgatggggctgggggatgtcaaattaacacctgcaaat
aaaatgaacaacaaggcagatgggacaccaaaagctgaatccaagtcaaagaagtccagt
tcctctactacaaccaatgagaagatcaccaaactctatgagctgggtggtgagcctgag
aggaagatctgggtagatcgttacctggcctttactgaagagaaggccatgggcatgaca
aacctcccagcagtgggcaggaaacccttggacctttacaggctctacatctcagtgaag
gagattggaggattgactcaggtcaacaaaaacaagaagtggcgcgagctagccacaaac
ctcaatgtgggcacctccagcagtgcagccagctctttgaagaagcagtacatccagtgt
ctttatgcctttgagtgcaagattgagcgaggtgaagacccccctccagatatctttgca
gctgctgattcaaagaagtcccagactaagatccagcctccatctccagcgggttcaggc
tcaatgcagggtcctcagacacctcagtccaccagcagctccatggcagaaggaggagac
ctgaagccaccaactccagcatcaacaccacacagtcagatgccccctttgccaggcatc
aggagtaactcagtgggccttcaggatgcctttgcagatggcagtgatcctacgttccag
aagaggaactccatgactccaaatccagggtaccagcccagcatgaatacctctgacatg
atgggtcgcatgtcttacgagccaaataaagatccttacagcagtatgaggaaagctcca
ggaagcgatcccttcatgtcctcagggcagggccccaacactgggatgggtgacccttac
aatcgtgctacaggtccagggatgggtaacatggccatggggcagcggcagcactactcc
tatggaggtccttacgacagagtgaggacggagcctggcatgggacccgagggcaattta
gcaacgggaactccccagccaaacatcatgccttccaccccggagtcagggatgtactcg
cccagccgctacccgcagcagcagcagcagcagcaaagacatgattcctatggcaatcaa
ttctccactcaaggcacatcctcgggcagccccttccccagccagcaaactaccatgtat
caacagcaacagcagaactacaagcggccgatggacggcagctacgggccgcccgccaag
cggcacgagggcgagatgtacaacgtgccctacagcacagggcaggggcagagccagcag
cagctgcccccagcacagagccagcagcccagccagcagcaagctgcacagccctgtccc
cagcaggacctgtacaaccagtacggcagcacgtaccccgccgccggccgcacccccgcg
gggccgcagaaccagttccccttccaattcggcagagacagggtctcagctcccccgggt
tccaacgctcagcagaacatgcctcctcagatgatgggtggacccatccagtctgctccg
gagggtcctcagcaaggctccatgtggcaggggcgcaatgacctggggtacagttacccc
aaccggcccagcgccggctccgcgccgcagggaccggcctaccacggagtgacgcgaacg
gatgaaatcctgcattcagaccagagggtcaaccatgagggaccatggccttcccacggg
aacaggcagcctccttacggcccctctgcccccgtgcccccaatgacgaggcccccccag
tctaattaccagaccccccccagcatgcagaatcacattcctcaggtatccagcccagca
cctctgcccagacctctggagaatcgcacttctccaagcaaatctccattcctgcactcg
gggatgaaaatgcagaaggcaggacctcctgtccctgcctcgcatataacaccagcagct
gtccagcctcccatgatccgacgggacatcaccttccccccgggatcagtagaagccaca
caacctgtgttgaagcagaggaggcggctgacggcaaaagatattggaactcctgaagcc
tggagagtgatgatgtctctgaagtccgggctgttagctgaaagtacgtgggccttagat
accataaacatcctgctctatgatgacaacagcataatgaccttcaacctcagccagctg
ccaggcctgctggagctcttggtggagtatttccggcgctgcctgatcgagatctttgga
atcctgaaggaatatgaggtgggagacccaggtcaaagaacactattagatcctgaaagg
ttctgcaagtcttcagcttcctctcctgaagaaggggaggaggatgatgaaccgcggagc
ctgaactgcgaggaggaagaagaggatgaggaagaagaggaggccgcgttttccagcaag
gataaagcacctctagagagcagcgaggaaaaactaacgagcaaatttgacaagctgcca
gtcaaggtggtgcagaaaaacgacccctttgtggtggattattcagacaagctggggcga
gtgcaggagttcgagagcgggctgctgcactggcggatcggcggcggcgacaccacggag
cacatccagacccacttcgagagcaagacggagctgccggcgcctcataaacgagcctcc
tgcagctctgccttgaggaaacgttcagcagctgagagcaatcccagcactagggaagga
gaggctcctccagctgacagctcctcggagaagaggataactgccaccatggatgacatg
ctgtcggcgcgtcccggctccctggcgggggaggaggaagaggttaaacctttggaaaca
gcaaaggaaagcagcaagtttccctttggcattagtccagctcagagccacaggaatatc
aaaattctggaggatgaacctcacagtaaagatgagacacccctctgcactctcctggac
tggcaggactctctggccaagcgctgcatctgtgtctccaacatcatcaggagtttatcg
tttgtgccaggcaatgactttgagatgtccaaacatcccgggctgctgctgatcctaggg
aaactgattctcttacaccacaagcatccagaacgcaaacaggcacccctgacctacgag
aaagaggaggagcaggaccaaggggtgagctgcaacaaggtggaatggtggtgggactgc
ttggagatgctgcgtgaaaatacactggtcacgttggccaacatttctggccagctggac
ctctccccttacccagaaagcatctgtttgcctatcctggatggactcctccactgggca
gtgtgtccatctgcagaggcccaggatcccttcccaacactggggcccagcgcggtcctc
tcccctcagagactggttttggaaacactcagcaaactcagcatccaggacaacaacgtg
gatttgatccttgcaactccccccttcagtcgcttggagaagctgtacagcaccatggtg
aggttcctcagtgacagaaagaacccggtgtgtcgagagatggctgtggtactactggcc
aacttggcacagggggacagcctggcagcgagagccatcgctgtgcagaagggcagcatt
ggcaacttgctgggcttcttggaggacagcctggcagccacgcagttccagcagagccag
gctggcttgatgcacatgcagaacccaccctttgagtcgacgagcgtggacatgatgcgg
cgagctgctcgggccctgctggccctggccaaggtggacgagaaccactcggagttcacc
ttgtacgagtcgcggctgttggacatctcggtgtcgcctttgatgaactccttggtttca
caagtcatttgtgacgtactgtttttaattggccagtcatga
DBGET
integrated database retrieval system
